EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000015109 (Gene tree)
Gene ID: 110963818
Gene Symbol: rbm42
Alias: mgc10433l|zgc:109907
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 15456 bases
Position: chrMVNR01001194.1:103738-119193
Accession: 110963818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000012446	RRM_1	PF00076.22	8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000020335	-	1762	XM_022212314	ENSAPOP00000012446	406 (aa)	XP_022068006	UPI000B8EFCE4

Gene Model

Click here to download ENSAPOG00000015109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000015109's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000015109	rbm42	100	83.498	ENSACIG00000010771	rbm42	100	83.498	Amphilophus_citrinellus
ENSAPOG00000015109	rbm42	100	98.276	ENSAOCG00000008873	rbm42	100	98.276	Amphiprion_ocellaris
ENSAPOG00000015109	rbm42	100	98.276	ENSAPEG00000012051	rbm42	99	98.276	Amphiprion_percula
ENSAPOG00000015109	rbm42	100	87.438	ENSATEG00000000536	rbm42	100	87.438	Anabas_testudineus
ENSAPOG00000015109	rbm42	100	86.946	ENSACLG00000004988	rbm42	100	87.224	Astatotilapia_calliptera
ENSAPOG00000015109	rbm42	100	74.279	ENSAMXG00000016545	rbm42	100	74.038	Astyanax_mexicanus
ENSAPOG00000015109	rbm42	97	82.620	ENSCSEG00000010248	rbm42	100	83.627	Cynoglossus_semilaevis
ENSAPOG00000015109	rbm42	100	81.463	ENSCVAG00000015589	rbm42	100	80.732	Cyprinodon_variegatus
ENSAPOG00000015109	rbm42	100	66.825	ENSDARG00000039910	rbm42	100	70.218	Danio_rerio
ENSAPOG00000015109	rbm42	100	73.176	ENSELUG00000022403	rbm42	100	73.239	Esox_lucius
ENSAPOG00000015109	rbm42	65	79.121	ENSFHEG00000006764	rbm42	91	80.000	Fundulus_heteroclitus
ENSAPOG00000015109	rbm42	100	72.263	ENSGMOG00000012660	rbm42	100	73.236	Gadus_morhua
ENSAPOG00000015109	rbm42	76	77.885	ENSGAFG00000009059	rbm42	99	79.288	Gambusia_affinis
ENSAPOG00000015109	rbm42	100	83.990	ENSGACG00000004170	rbm42	100	83.498	Gasterosteus_aculeatus
ENSAPOG00000015109	rbm42	100	86.946	ENSHBUG00000011141	rbm42	100	86.946	Haplochromis_burtoni
ENSAPOG00000015109	rbm42	100	79.657	ENSHCOG00000021214	rbm42	100	77.941	Hippocampus_comes
ENSAPOG00000015109	rbm42	100	73.634	ENSIPUG00000022365	rbm42	99	72.512	Ictalurus_punctatus
ENSAPOG00000015109	rbm42	91	78.167	ENSKMAG00000015287	rbm42	99	79.245	Kryptolebias_marmoratus
ENSAPOG00000015109	rbm42	84	84.104	ENSLBEG00000004578	-	96	81.503	Labrus_bergylta
ENSAPOG00000015109	rbm42	100	84.352	ENSLBEG00000017547	rbm42	100	82.152	Labrus_bergylta
ENSAPOG00000015109	rbm42	100	68.322	ENSLOCG00000003368	rbm42	100	68.720	Lepisosteus_oculatus
ENSAPOG00000015109	rbm42	100	89.409	ENSMAMG00000006708	rbm42	100	89.409	Mastacembelus_armatus
ENSAPOG00000015109	rbm42	100	86.946	ENSMZEG00005025234	rbm42	100	87.224	Maylandia_zebra
ENSAPOG00000015109	rbm42	91	88.076	ENSMALG00000015720	rbm42	100	88.076	Monopterus_albus
ENSAPOG00000015109	rbm42	100	86.797	ENSONIG00000008029	rbm42	100	86.797	Oreochromis_niloticus
ENSAPOG00000015109	rbm42	100	64.133	ENSORLG00020022507	rbm42	100	61.060	Oryzias_latipes_hni
ENSAPOG00000015109	rbm42	100	82.020	ENSORLG00015000659	rbm42	100	82.020	Oryzias_latipes_hsok
ENSAPOG00000015109	rbm42	59	84.362	ENSOMEG00000014332	rbm42	95	81.395	Oryzias_melastigma
ENSAPOG00000015109	rbm42	100	74.519	ENSPKIG00000015165	rbm42	100	73.253	Paramormyrops_kingsleyae
ENSAPOG00000015109	rbm42	73	86.559	ENSPMGG00000003569	rbm42	100	98.571	Periophthalmus_magnuspinnatus
ENSAPOG00000015109	rbm42	52	57.078	ENSPMAG00000008633	rbm42	100	49.206	Petromyzon_marinus
ENSAPOG00000015109	rbm42	100	79.612	ENSPFOG00000007701	rbm42	100	80.583	Poecilia_formosa
ENSAPOG00000015109	rbm42	100	79.612	ENSPLAG00000009405	rbm42	100	80.583	Poecilia_latipinna
ENSAPOG00000015109	rbm42	100	80.000	ENSPMEG00000010375	rbm42	100	80.976	Poecilia_mexicana
ENSAPOG00000015109	rbm42	100	79.854	ENSPREG00000018102	rbm42	100	80.825	Poecilia_reticulata
ENSAPOG00000015109	rbm42	100	86.700	ENSPNYG00000014460	rbm42	100	86.978	Pundamilia_nyererei
ENSAPOG00000015109	rbm42	100	74.463	ENSPNAG00000009961	rbm42	100	73.113	Pygocentrus_nattereri
ENSAPOG00000015109	rbm42	100	74.588	ENSSFOG00015019227	rbm42	100	72.471	Scleropages_formosus
ENSAPOG00000015109	rbm42	100	86.978	ENSSMAG00000011935	rbm42	100	85.749	Scophthalmus_maximus
ENSAPOG00000015109	rbm42	100	89.901	ENSSDUG00000004033	rbm42	100	89.901	Seriola_dumerili
ENSAPOG00000015109	rbm42	100	78.325	ENSSLDG00000009918	rbm42	100	96.471	Seriola_lalandi_dorsalis
ENSAPOG00000015109	rbm42	100	97.044	ENSSPAG00000019871	rbm42	100	97.044	Stegastes_partitus
ENSAPOG00000015109	rbm42	100	80.296	ENSTRUG00000024586	-	76	79.310	Takifugu_rubripes
ENSAPOG00000015109	rbm42	99	69.091	ENSTNIG00000011669	rbm42	100	69.841	Tetraodon_nigroviridis
ENSAPOG00000015109	rbm42	100	56.463	ENSXETG00000017599	rbm42	100	58.548	Xenopus_tropicalis
ENSAPOG00000015109	rbm42	100	79.369	ENSXMAG00000012827	rbm42	100	80.340	Xiphophorus_maculatus