EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000015161 (Gene tree)
Gene ID: -
Gene Symbol: snrpb2 (1 of many)
Alias: im:7148817|mucMS2
Full Name: U2 small nuclear ribonucleoprotein B''-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 562 bases
Position: chrMVNR01013241.1:2950-3511
Accession: 110946785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000029338	RRM_1	PF00076.22	1.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000020378	-	291	XM_022188280	ENSAPOP00000029338	96 (aa)	XP_022043972	-

Gene Model

Click here to download ENSAPOG00000015161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000015161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000015161	snrpb2	78	33.333	ENSAPOG00000023788	sf3b6	54	33.333
ENSAPOG00000015161	snrpb2	100	100.000	ENSAPOG00000014688	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000015161	snrpb2	81	70.513	ENSG00000077312	SNRPA	90	70.513	Homo_sapiens
ENSAPOG00000015161	snrpb2	81	69.231	ENSCJAG00000045570	-	84	69.231	Callithrix_jacchus
ENSAPOG00000015161	snrpb2	81	70.513	ENSCAFG00020017913	-	81	70.513	Canis_lupus_dingo
ENSAPOG00000015161	snrpb2	79	69.737	ENSCAFG00020024265	-	61	70.667	Canis_lupus_dingo
ENSAPOG00000015161	snrpb2	85	67.073	ENSCAFG00020014898	SNRPA	80	70.513	Canis_lupus_dingo
ENSAPOG00000015161	snrpb2	81	82.051	ENSCAFG00020011358	-	89	82.051	Canis_lupus_dingo
ENSAPOG00000015161	snrpb2	81	70.513	ENSCATG00000032716	SNRPA	81	70.513	Cercocebus_atys
ENSAPOG00000015161	snrpb2	83	70.000	ENSCANG00000038637	SNRPA	80	70.513	Colobus_angolensis_palliatus
ENSAPOG00000015161	snrpb2	94	63.158	ENSMFAG00000041710	SNRPA	81	70.513	Macaca_fascicularis
ENSAPOG00000015161	snrpb2	91	64.368	ENSMMUG00000022024	SNRPA	82	70.513	Macaca_mulatta
ENSAPOG00000015161	snrpb2	81	70.513	ENSMLEG00000039593	SNRPA	81	70.513	Mandrillus_leucophaeus
ENSAPOG00000015161	snrpb2	82	86.076	MGP_CAROLIEiJ_G0024372	Snrpb2	55	86.076	Mus_caroli
ENSAPOG00000015161	snrpb2	82	86.076	ENSMUSG00000008333	Snrpb2	55	86.076	Mus_musculus
ENSAPOG00000015161	snrpb2	82	86.076	MGP_PahariEiJ_G0025817	Snrpb2	55	86.076	Mus_pahari
ENSAPOG00000015161	snrpb2	82	86.076	MGP_SPRETEiJ_G0025291	Snrpb2	55	86.076	Mus_spretus
ENSAPOG00000015161	snrpb2	82	68.354	ENSODEG00000000626	-	79	69.231	Octodon_degus
ENSAPOG00000015161	snrpb2	81	70.513	ENSPANG00000023874	SNRPA	81	70.513	Papio_anubis
ENSAPOG00000015161	snrpb2	97	62.366	ENSPCOG00000025196	SNRPA	78	70.513	Propithecus_coquereli
ENSAPOG00000015161	snrpb2	83	70.000	ENSRBIG00000008335	SNRPA	80	70.513	Rhinopithecus_bieti
ENSAPOG00000015161	snrpb2	83	70.000	ENSRROG00000042727	SNRPA	80	70.513	Rhinopithecus_roxellana
ENSAPOG00000015161	snrpb2	76	34.247	YIR009W	MSL1	65	34.247	Saccharomyces_cerevisiae
ENSAPOG00000015161	snrpb2	81	70.513	ENSSBOG00000034722	SNRPA	68	61.702	Saimiri_boliviensis_boliviensis
ENSAPOG00000015161	snrpb2	85	69.512	ENSUAMG00000003002	-	85	70.513	Ursus_americanus
ENSAPOG00000015161	snrpb2	79	71.053	ENSUMAG00000000069	-	58	71.053	Ursus_maritimus
ENSAPOG00000015161	snrpb2	85	67.073	ENSVVUG00000005647	SNRPA	80	70.513	Vulpes_vulpes
ENSAPOG00000015161	snrpb2	81	69.231	ENSVVUG00000014183	-	67	72.000	Vulpes_vulpes
ENSAPOG00000015161	snrpb2	80	80.519	ENSXCOG00000012134	-	80	80.263	Xiphophorus_couchianus