EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000015355 (Gene tree)
Gene ID: 110958404
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 30534 bases
Position: chrMVNR01000612.1:325196-355729
Accession: 110958404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000029544	RNase_Zc3h12a	PF11977.8	6.1e-66	1	1
ENSAPOP00000012649	RNase_Zc3h12a	PF11977.8	6.2e-66	1	1
ENSAPOP00000012655	RNase_Zc3h12a	PF11977.8	6.2e-66	1	1
ENSAPOP00000029467	RNase_Zc3h12a	PF11977.8	6.7e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000020590	-	7977	-	ENSAPOP00000012649	924 (aa)	-	-
ENSAPOT00000032098	-	7831	XM_022204934	ENSAPOP00000012655	924 (aa)	XP_022060626	-
ENSAPOT00000020618	-	3627	-	ENSAPOP00000029467	971 (aa)	-	-
ENSAPOT00000032096	-	3730	-	ENSAPOP00000029544	911 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000015355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000015355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000015355	-	68	52.778	ENSAPOG00000001632	-	65	73.623

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000015355	-	82	79.974	ENSACIG00000001362	-	83	79.710	Amphilophus_citrinellus
ENSAPOG00000015355	-	82	93.536	ENSAOCG00000003866	-	98	94.677	Amphiprion_ocellaris
ENSAPOG00000015355	-	83	90.526	ENSAPEG00000005727	-	96	89.677	Amphiprion_percula
ENSAPOG00000015355	-	54	95.976	ENSAPEG00000018582	-	78	95.976	Amphiprion_percula
ENSAPOG00000015355	-	83	86.292	ENSATEG00000004134	-	79	87.337	Anabas_testudineus
ENSAPOG00000015355	-	82	48.225	ENSATEG00000002260	-	89	76.062	Anabas_testudineus
ENSAPOG00000015355	-	82	83.594	ENSACLG00000027924	-	79	84.115	Astatotilapia_calliptera
ENSAPOG00000015355	-	67	54.693	ENSACLG00000018493	-	71	53.324	Astatotilapia_calliptera
ENSAPOG00000015355	-	78	79.258	ENSCSEG00000010073	-	96	83.803	Cynoglossus_semilaevis
ENSAPOG00000015355	-	67	53.670	ENSCSEG00000008542	-	67	54.167	Cynoglossus_semilaevis
ENSAPOG00000015355	-	82	77.513	ENSCVAG00000002328	-	79	77.368	Cyprinodon_variegatus
ENSAPOG00000015355	-	66	61.264	ENSELUG00000009319	-	76	61.228	Esox_lucius
ENSAPOG00000015355	-	53	64.386	ENSELUG00000005470	-	72	54.944	Esox_lucius
ENSAPOG00000015355	-	82	77.261	ENSFHEG00000021225	-	84	88.961	Fundulus_heteroclitus
ENSAPOG00000015355	-	82	77.704	ENSGAFG00000005290	-	79	77.441	Gambusia_affinis
ENSAPOG00000015355	-	54	79.108	ENSGACG00000014201	-	77	79.919	Gasterosteus_aculeatus
ENSAPOG00000015355	-	82	83.594	ENSHBUG00000006831	-	79	84.115	Haplochromis_burtoni
ENSAPOG00000015355	-	82	70.410	ENSHCOG00000008878	-	85	69.749	Hippocampus_comes
ENSAPOG00000015355	-	82	79.762	ENSKMAG00000011694	-	79	80.423	Kryptolebias_marmoratus
ENSAPOG00000015355	-	80	83.562	ENSLBEG00000012554	-	85	91.447	Labrus_bergylta
ENSAPOG00000015355	-	83	83.615	ENSLBEG00000003547	-	79	84.785	Labrus_bergylta
ENSAPOG00000015355	-	68	54.714	ENSLBEG00000012710	-	67	56.447	Labrus_bergylta
ENSAPOG00000015355	-	80	49.416	ENSMAMG00000020372	-	67	54.348	Mastacembelus_armatus
ENSAPOG00000015355	-	83	80.303	ENSMAMG00000021794	-	98	88.148	Mastacembelus_armatus
ENSAPOG00000015355	-	82	83.464	ENSMZEG00005007718	-	79	83.984	Maylandia_zebra
ENSAPOG00000015355	-	67	54.693	ENSMZEG00005019137	-	90	70.323	Maylandia_zebra
ENSAPOG00000015355	-	82	48.846	ENSMMOG00000019526	-	76	49.616	Mola_mola
ENSAPOG00000015355	-	78	81.337	ENSMMOG00000005728	-	88	90.000	Mola_mola
ENSAPOG00000015355	-	83	83.990	ENSMALG00000010501	-	79	84.514	Monopterus_albus
ENSAPOG00000015355	-	82	83.594	ENSNBRG00000006978	-	79	83.984	Neolamprologus_brichardi
ENSAPOG00000015355	-	67	52.674	ENSNBRG00000012175	-	90	70.968	Neolamprologus_brichardi
ENSAPOG00000015355	-	82	84.286	ENSONIG00000012268	-	81	86.446	Oreochromis_niloticus
ENSAPOG00000015355	-	82	70.370	ENSORLG00000029243	-	77	80.757	Oryzias_latipes
ENSAPOG00000015355	-	82	75.830	ENSORLG00020017005	-	80	77.045	Oryzias_latipes_hni
ENSAPOG00000015355	-	82	76.455	ENSORLG00015015211	-	80	77.778	Oryzias_latipes_hsok
ENSAPOG00000015355	-	82	77.291	ENSOMEG00000006666	-	80	78.439	Oryzias_melastigma
ENSAPOG00000015355	-	53	59.388	ENSPMGG00000020126	-	50	59.448	Periophthalmus_magnuspinnatus
ENSAPOG00000015355	-	82	79.683	ENSPLAG00000009867	-	79	79.156	Poecilia_latipinna
ENSAPOG00000015355	-	82	80.053	ENSPMEG00000006624	-	79	79.288	Poecilia_mexicana
ENSAPOG00000015355	-	68	51.242	ENSPMEG00000011676	-	51	61.618	Poecilia_mexicana
ENSAPOG00000015355	-	66	50.238	ENSPREG00000001607	-	73	79.386	Poecilia_reticulata
ENSAPOG00000015355	-	82	79.630	ENSPREG00000010838	-	79	79.365	Poecilia_reticulata
ENSAPOG00000015355	-	82	84.525	ENSSMAG00000007545	-	80	85.046	Scophthalmus_maximus
ENSAPOG00000015355	-	77	50.504	ENSSMAG00000007258	-	67	55.882	Scophthalmus_maximus
ENSAPOG00000015355	-	68	54.938	ENSSDUG00000013237	-	90	66.447	Seriola_dumerili
ENSAPOG00000015355	-	83	87.435	ENSSDUG00000021864	-	79	88.342	Seriola_dumerili
ENSAPOG00000015355	-	82	49.808	ENSSLDG00000004886	-	80	50.000	Seriola_lalandi_dorsalis
ENSAPOG00000015355	-	83	87.484	ENSSLDG00000012268	-	79	88.342	Seriola_lalandi_dorsalis
ENSAPOG00000015355	-	83	90.921	ENSSPAG00000009485	-	79	92.218	Stegastes_partitus
ENSAPOG00000015355	-	68	54.644	ENSSPAG00000001850	-	73	52.348	Stegastes_partitus
ENSAPOG00000015355	-	83	79.474	ENSTRUG00000022519	-	79	79.868	Takifugu_rubripes
ENSAPOG00000015355	-	56	79.608	ENSTNIG00000014519	-	100	82.292	Tetraodon_nigroviridis
ENSAPOG00000015355	-	82	79.233	ENSXMAG00000027171	-	79	79.233	Xiphophorus_maculatus
ENSAPOG00000015355	-	67	51.735	ENSXMAG00000014715	-	83	80.435	Xiphophorus_maculatus