EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSAPOG00000015538 (Gene tree)
Gene ID
110966176
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Acanthochromis_polyacanthus
Status
putative
Strand
Minus strand
Length
18000 bases
Position
chrMVNR01001561.1:26980-44979
Accession
110966176
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPOP00000029488CSDPF00313.224.5e-8215
ENSAPOP00000029488CSDPF00313.224.5e-8225
ENSAPOP00000029488CSDPF00313.224.5e-8235
ENSAPOP00000029488CSDPF00313.224.5e-8245
ENSAPOP00000029488CSDPF00313.224.5e-8255
ENSAPOP00000012706CSDPF00313.229.3e-8215
ENSAPOP00000012706CSDPF00313.229.3e-8225
ENSAPOP00000012706CSDPF00313.229.3e-8235
ENSAPOP00000012706CSDPF00313.229.3e-8245
ENSAPOP00000012706CSDPF00313.229.3e-8255
ENSAPOP00000029517CSDPF00313.229.4e-8215
ENSAPOP00000029517CSDPF00313.229.4e-8225
ENSAPOP00000029517CSDPF00313.229.4e-8235
ENSAPOP00000029517CSDPF00313.229.4e-8245
ENSAPOP00000029517CSDPF00313.229.4e-8255
ENSAPOP00000012747CSDPF00313.221e-8115
ENSAPOP00000012747CSDPF00313.221e-8125
ENSAPOP00000012747CSDPF00313.221e-8135
ENSAPOP00000012747CSDPF00313.221e-8145
ENSAPOP00000012747CSDPF00313.221e-8155
ENSAPOP00000012725CSDPF00313.221.5e-8115
ENSAPOP00000012725CSDPF00313.221.5e-8125
ENSAPOP00000012725CSDPF00313.221.5e-8135
ENSAPOP00000012725CSDPF00313.221.5e-8145
ENSAPOP00000012725CSDPF00313.221.5e-8155
ENSAPOP00000012729CSDPF00313.221.6e-8115
ENSAPOP00000012729CSDPF00313.221.6e-8125
ENSAPOP00000012729CSDPF00313.221.6e-8135
ENSAPOP00000012729CSDPF00313.221.6e-8145
ENSAPOP00000012729CSDPF00313.221.6e-8155
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPOT00000020726-4952XM_022215450ENSAPOP00000012747868 (aa)XP_022071142UPI000B8F8BE1
ENSAPOT00000020680-4922XM_022215452ENSAPOP00000012725858 (aa)XP_022071144UPI000B9082DE
ENSAPOT00000032131-4940XM_022215451ENSAPOP00000029517864 (aa)XP_022071143UPI000B906A37
ENSAPOT00000020649-2307-ENSAPOP00000029488768 (aa)--
ENSAPOT00000020701-4934-ENSAPOP00000012729862 (aa)--
ENSAPOT00000020661-4682-ENSAPOP00000012706820 (aa)--
Gene Model
Click here to download ENSAPOG00000015538's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000015538's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPOG00000015538csde110077.662ENSG00000009307CSDE110085.294Homo_sapiens
ENSAPOG00000015538csde110076.883ENSAMEG00000017129CSDE19476.883Ailuropoda_melanoleuca
ENSAPOG00000015538csde19192.246ENSACIG00000015175csde110093.243Amphilophus_citrinellus
ENSAPOG00000015538csde110099.424ENSAOCG00000011510csde110099.424Amphiprion_ocellaris
ENSAPOG00000015538csde110099.539ENSAPEG00000007194csde110099.539Amphiprion_percula
ENSAPOG00000015538csde110094.538ENSATEG00000003864csde110094.538Anabas_testudineus
ENSAPOG00000015538csde110079.714ENSAPLG00000008797CSDE110079.714Anas_platyrhynchos
ENSAPOG00000015538csde110077.157ENSACAG00000003120CSDE110077.534Anolis_carolinensis
ENSAPOG00000015538csde19362.191ENSANAG00000028396-9163.265Aotus_nancymaae
ENSAPOG00000015538csde110077.532ENSANAG00000024665CSDE19577.532Aotus_nancymaae
ENSAPOG00000015538csde110093.628ENSACLG00000013296csde110093.628Astatotilapia_calliptera
ENSAPOG00000015538csde110087.678ENSAMXG00000007436csde110087.678Astyanax_mexicanus
ENSAPOG00000015538csde110077.273ENSBTAG00000000678CSDE110077.273Bos_taurus
ENSAPOG00000015538csde110077.532ENSCJAG00000012565CSDE19873.944Callithrix_jacchus
ENSAPOG00000015538csde19878.117ENSCAFG00000009618CSDE19478.117Canis_familiaris
ENSAPOG00000015538csde110077.922ENSCAFG00020000481CSDE110077.922Canis_lupus_dingo
ENSAPOG00000015538csde110077.403ENSCHIG00000017250CSDE110077.403Capra_hircus
ENSAPOG00000015538csde110077.662ENSTSYG00000003747CSDE110077.662Carlito_syrichta
ENSAPOG00000015538csde110068.681ENSCAPG00000015128CSDE110068.681Cavia_aperea
ENSAPOG00000015538csde110072.222ENSCPOG00000040388CSDE110072.222Cavia_porcellus
ENSAPOG00000015538csde19556.872ENSCCAG00000033677-9956.872Cebus_capucinus
ENSAPOG00000015538csde110077.532ENSCCAG00000036794CSDE110075.366Cebus_capucinus
ENSAPOG00000015538csde19755.629ENSCCAG00000030878-9155.679Cebus_capucinus
ENSAPOG00000015538csde110077.662ENSCATG00000036962CSDE19777.662Cercocebus_atys
ENSAPOG00000015538csde110077.922ENSCLAG00000006618CSDE110077.922Chinchilla_lanigera
ENSAPOG00000015538csde110075.121ENSCSAG00000001658CSDE19874.061Chlorocebus_sabaeus
ENSAPOG00000015538csde110082.524ENSCHOG00000000918CSDE18980.488Choloepus_hoffmanni
ENSAPOG00000015538csde110079.974ENSCPBG00000016547CSDE110079.974Chrysemys_picta_bellii
ENSAPOG00000015538csde19843.011ENSCING00000014465-9842.379Ciona_intestinalis
ENSAPOG00000015538csde19742.874ENSCSAVG00000008100-10042.536Ciona_savignyi
ENSAPOG00000015538csde110077.662ENSCANG00000035096CSDE19777.662Colobus_angolensis_palliatus
ENSAPOG00000015538csde19079.401ENSCANG00000031069-9478.967Colobus_angolensis_palliatus
ENSAPOG00000015538csde110077.013ENSCGRG00001016833-10077.013Cricetulus_griseus_chok1gshd
ENSAPOG00000015538csde110063.377ENSCGRG00001014011-10063.377Cricetulus_griseus_chok1gshd
ENSAPOG00000015538csde19773.510ENSCGRG00000002225-10073.778Cricetulus_griseus_crigri
ENSAPOG00000015538csde110073.913ENSCGRG00000005831-10073.913Cricetulus_griseus_crigri
ENSAPOG00000015538csde110092.570ENSCSEG00000002620csde110092.468Cynoglossus_semilaevis
ENSAPOG00000015538csde110092.458ENSCVAG00000001344csde110092.458Cyprinodon_variegatus
ENSAPOG00000015538csde110087.591ENSDARG00000074758csde110089.568Danio_rerio
ENSAPOG00000015538csde110077.951ENSDNOG00000010287-9377.951Dasypus_novemcinctus
ENSAPOG00000015538csde15957.203ENSDNOG00000034464-9957.203Dasypus_novemcinctus
ENSAPOG00000015538csde19976.453ENSDORG00000011609Csde110076.453Dipodomys_ordii
ENSAPOG00000015538csde19748.141FBgn0263352Unr7947.705Drosophila_melanogaster
ENSAPOG00000015538csde19960.677ENSETEG00000013678-9960.677Echinops_telfairi
ENSAPOG00000015538csde18980.488ENSETEG00000002491-8672.334Echinops_telfairi
ENSAPOG00000015538csde17953.795ENSETEG00000007109-9953.795Echinops_telfairi
ENSAPOG00000015538csde19069.352ENSETEG00000006280-9969.352Echinops_telfairi
ENSAPOG00000015538csde19953.791ENSEBUG00000008647csde19952.392Eptatretus_burgeri
ENSAPOG00000015538csde110078.182ENSEASG00005006284CSDE110075.976Equus_asinus_asinus
ENSAPOG00000015538csde110078.182ENSECAG00000020885CSDE19978.042Equus_caballus
ENSAPOG00000015538csde19381.308ENSEEUG00000006286CSDE16881.308Erinaceus_europaeus
ENSAPOG00000015538csde110089.564ENSELUG00000015507csde110089.564Esox_lucius
ENSAPOG00000015538csde110077.922ENSFCAG00000029266CSDE110077.922Felis_catus
ENSAPOG00000015538csde110076.671ENSFALG00000003407CSDE110077.045Ficedula_albicollis
ENSAPOG00000015538csde19976.602ENSFDAG00000007882CSDE110076.602Fukomys_damarensis
ENSAPOG00000015538csde19892.848ENSFHEG00000010799csde19992.848Fundulus_heteroclitus
ENSAPOG00000015538csde19988.063ENSGMOG00000012731csde110088.494Gadus_morhua
ENSAPOG00000015538csde19876.980ENSGALG00000002139CSDE19877.363Gallus_gallus
ENSAPOG00000015538csde19492.214ENSGAFG00000005241csde19592.214Gambusia_affinis
ENSAPOG00000015538csde19992.073ENSGACG00000004544csde110092.525Gasterosteus_aculeatus
ENSAPOG00000015538csde110079.844ENSGAGG00000017685CSDE110077.534Gopherus_agassizii
ENSAPOG00000015538csde110077.662ENSGGOG00000002164CSDE110077.662Gorilla_gorilla
ENSAPOG00000015538csde110093.628ENSHBUG00000020315csde110093.628Haplochromis_burtoni
ENSAPOG00000015538csde19960.584ENSHGLG00000000650-9960.880Heterocephalus_glaber_female
ENSAPOG00000015538csde19766.079ENSHGLG00000010039-10066.667Heterocephalus_glaber_female
ENSAPOG00000015538csde19967.497ENSHGLG00000007471-9867.497Heterocephalus_glaber_female
ENSAPOG00000015538csde19967.809ENSHGLG00000008555-10068.107Heterocephalus_glaber_female
ENSAPOG00000015538csde110063.224ENSHGLG00000019549-10063.280Heterocephalus_glaber_female
ENSAPOG00000015538csde110070.649ENSHGLG00000009620-10070.779Heterocephalus_glaber_female
ENSAPOG00000015538csde110069.740ENSHGLG00000003829-10069.740Heterocephalus_glaber_female
ENSAPOG00000015538csde19963.758ENSHGLG00100002245-9964.068Heterocephalus_glaber_male
ENSAPOG00000015538csde110077.532ENSHGLG00100019438-10077.532Heterocephalus_glaber_male
ENSAPOG00000015538csde19365.647ENSHGLG00100004195-10065.647Heterocephalus_glaber_male
ENSAPOG00000015538csde110065.455ENSHGLG00100012072-10065.455Heterocephalus_glaber_male
ENSAPOG00000015538csde19760.573ENSHGLG00100004833-10061.111Heterocephalus_glaber_male
ENSAPOG00000015538csde110063.117ENSHGLG00100001846-10063.117Heterocephalus_glaber_male
ENSAPOG00000015538csde19966.317ENSHGLG00100007287-9866.317Heterocephalus_glaber_male
ENSAPOG00000015538csde19765.859ENSHGLG00100006910-10066.444Heterocephalus_glaber_male
ENSAPOG00000015538csde110091.417ENSHCOG00000004158csde110091.417Hippocampus_comes
ENSAPOG00000015538csde110086.122ENSIPUG00000000355csde110086.122Ictalurus_punctatus
ENSAPOG00000015538csde110063.985ENSSTOG00000030994-10063.985Ictidomys_tridecemlineatus
ENSAPOG00000015538csde19356.830ENSSTOG00000032722-9956.830Ictidomys_tridecemlineatus
ENSAPOG00000015538csde19976.453ENSJJAG00000019571Csde110076.453Jaculus_jaculus
ENSAPOG00000015538csde110089.818ENSKMAG00000005685csde110089.818Kryptolebias_marmoratus
ENSAPOG00000015538csde110095.133ENSLBEG00000014770csde110095.133Labrus_bergylta
ENSAPOG00000015538csde110074.700ENSLACG00000018452CSDE19872.874Latimeria_chalumnae
ENSAPOG00000015538csde110085.122ENSLOCG00000010413csde19883.059Lepisosteus_oculatus
ENSAPOG00000015538csde110077.143ENSLAFG00000007150CSDE19677.143Loxodonta_africana
ENSAPOG00000015538csde110077.662ENSMFAG00000003674CSDE110077.662Macaca_fascicularis
ENSAPOG00000015538csde110077.662ENSMMUG00000001974CSDE110077.662Macaca_mulatta
ENSAPOG00000015538csde110077.662ENSMNEG00000045247CSDE19777.662Macaca_nemestrina
ENSAPOG00000015538csde110077.403ENSMLEG00000038673CSDE19873.826Mandrillus_leucophaeus
ENSAPOG00000015538csde110095.708ENSMAMG00000008821csde110095.708Mastacembelus_armatus
ENSAPOG00000015538csde110093.628ENSMZEG00005021675csde110093.628Maylandia_zebra
ENSAPOG00000015538csde110079.610ENSMGAG00000016381CSDE110079.610Meleagris_gallopavo
ENSAPOG00000015538csde19976.155ENSMAUG00000014031Csde110076.155Mesocricetus_auratus
ENSAPOG00000015538csde110078.052ENSMICG00000002050CSDE19975.278Microcebus_murinus
ENSAPOG00000015538csde110077.013ENSMOCG00000018960Csde110077.013Microtus_ochrogaster
ENSAPOG00000015538csde110095.839ENSMMOG00000015075csde110095.839Mola_mola
ENSAPOG00000015538csde110078.497ENSMODG00000004685CSDE110076.951Monodelphis_domestica
ENSAPOG00000015538csde110095.319ENSMALG00000007132csde110095.319Monopterus_albus
ENSAPOG00000015538csde110077.143MGP_CAROLIEiJ_G0025444Csde110084.106Mus_caroli
ENSAPOG00000015538csde110077.143ENSMUSG00000068823Csde110084.106Mus_musculus
ENSAPOG00000015538csde110077.143MGP_PahariEiJ_G0026888Csde110084.106Mus_pahari
ENSAPOG00000015538csde110077.143MGP_SPRETEiJ_G0026394Csde110084.106Mus_spretus
ENSAPOG00000015538csde19875.495ENSMPUG00000005753CSDE19975.871Mustela_putorius_furo
ENSAPOG00000015538csde110077.403ENSMLUG00000005681CSDE19477.403Myotis_lucifugus
ENSAPOG00000015538csde19652.667ENSNGAG00000012599-10052.667Nannospalax_galili
ENSAPOG00000015538csde19976.304ENSNGAG00000021929Csde110076.304Nannospalax_galili
ENSAPOG00000015538csde110093.628ENSNBRG00000020808csde110093.628Neolamprologus_brichardi
ENSAPOG00000015538csde110077.662ENSNLEG00000004842CSDE19777.662Nomascus_leucogenys
ENSAPOG00000015538csde19884.466ENSMEUG00000002677CSDE19584.466Notamacropus_eugenii
ENSAPOG00000015538csde19882.524ENSOPRG00000005002CSDE17682.524Ochotona_princeps
ENSAPOG00000015538csde19752.516ENSODEG00000005979-9852.980Octodon_degus
ENSAPOG00000015538csde19976.453ENSODEG00000007383-10076.453Octodon_degus
ENSAPOG00000015538csde110093.423ENSONIG00000009309csde110093.880Oreochromis_niloticus
ENSAPOG00000015538csde110079.661ENSOANG00000003346-8279.661Ornithorhynchus_anatinus
ENSAPOG00000015538csde110077.273ENSOCUG00000016438CSDE19873.709Oryctolagus_cuniculus
ENSAPOG00000015538csde110091.146ENSORLG00000000707csde110091.422Oryzias_latipes
ENSAPOG00000015538csde110090.854ENSORLG00020005148csde110091.299Oryzias_latipes_hni
ENSAPOG00000015538csde110091.016ENSORLG00015019415csde110091.299Oryzias_latipes_hsok
ENSAPOG00000015538csde110091.797ENSOMEG00000015656csde110092.034Oryzias_melastigma
ENSAPOG00000015538csde110078.052ENSOGAG00000012127CSDE19478.052Otolemur_garnettii
ENSAPOG00000015538csde110077.403ENSOARG00000020034CSDE19477.403Ovis_aries
ENSAPOG00000015538csde110077.662ENSPPAG00000025861CSDE110077.662Pan_paniscus
ENSAPOG00000015538csde110077.922ENSPPRG00000006747CSDE19874.296Panthera_pardus
ENSAPOG00000015538csde110077.922ENSPTIG00000015468CSDE110075.732Panthera_tigris_altaica
ENSAPOG00000015538csde110077.662ENSPTRG00000033721CSDE110075.488Pan_troglodytes
ENSAPOG00000015538csde110077.662ENSPANG00000018873CSDE110077.662Papio_anubis
ENSAPOG00000015538csde110086.719ENSPKIG00000009459csde110086.719Paramormyrops_kingsleyae
ENSAPOG00000015538csde19678.602ENSPSIG00000003823CSDE19678.602Pelodiscus_sinensis
ENSAPOG00000015538csde110090.897ENSPMGG00000000772csde110090.897Periophthalmus_magnuspinnatus
ENSAPOG00000015538csde19976.453ENSPEMG00000020357-10076.453Peromyscus_maniculatus_bairdii
ENSAPOG00000015538csde110076.578ENSPCIG00000022587CSDE110076.951Phascolarctos_cinereus
ENSAPOG00000015538csde19791.446ENSPFOG00000012664csde110091.446Poecilia_formosa
ENSAPOG00000015538csde19585.561ENSPLAG00000017680csde19385.561Poecilia_latipinna
ENSAPOG00000015538csde19585.714ENSPMEG00000005094csde19585.714Poecilia_mexicana
ENSAPOG00000015538csde110091.687ENSPREG00000011631csde110091.687Poecilia_reticulata
ENSAPOG00000015538csde110075.000ENSPPYG00000000996CSDE110075.366Pongo_abelii
ENSAPOG00000015538csde110083.495ENSPCAG00000014368CSDE19083.495Procavia_capensis
ENSAPOG00000015538csde110077.922ENSPCOG00000017893CSDE110077.922Propithecus_coquereli
ENSAPOG00000015538csde19069.888ENSPCOG00000008223-9269.888Propithecus_coquereli
ENSAPOG00000015538csde110072.597ENSPVAG00000008225CSDE19572.597Pteropus_vampyrus
ENSAPOG00000015538csde110093.628ENSPNYG00000013745csde110093.628Pundamilia_nyererei
ENSAPOG00000015538csde110088.067ENSPNAG00000001958csde110088.067Pygocentrus_nattereri
ENSAPOG00000015538csde110074.727ENSRNOG00000061058Csde110074.878Rattus_norvegicus
ENSAPOG00000015538csde110073.247ENSRBIG00000038966-9869.683Rhinopithecus_bieti
ENSAPOG00000015538csde110074.708ENSRBIG00000038088-10074.708Rhinopithecus_bieti
ENSAPOG00000015538csde110077.662ENSRROG00000043101CSDE19777.662Rhinopithecus_roxellana
ENSAPOG00000015538csde110077.532ENSSBOG00000035592CSDE19577.532Saimiri_boliviensis_boliviensis
ENSAPOG00000015538csde110079.221ENSSHAG00000009831CSDE110079.221Sarcophilus_harrisii
ENSAPOG00000015538csde110095.238ENSSFOG00015007498csde19395.238Scleropages_formosus
ENSAPOG00000015538csde110094.531ENSSMAG00000007203csde110094.531Scophthalmus_maximus
ENSAPOG00000015538csde110096.875ENSSDUG00000015380csde110096.875Seriola_dumerili
ENSAPOG00000015538csde110096.875ENSSLDG00000008819csde110096.875Seriola_lalandi_dorsalis
ENSAPOG00000015538csde110077.273ENSSARG00000000738CSDE19477.273Sorex_araneus
ENSAPOG00000015538csde110080.104ENSSPUG00000008714CSDE110080.104Sphenodon_punctatus
ENSAPOG00000015538csde110097.656ENSSPAG00000000716csde110097.656Stegastes_partitus
ENSAPOG00000015538csde110078.052ENSSSCG00000006752CSDE110078.052Sus_scrofa
ENSAPOG00000015538csde110075.758ENSTGUG00000000972CSDE110076.127Taeniopygia_guttata
ENSAPOG00000015538csde110088.281ENSTRUG00000007996csde110088.281Takifugu_rubripes
ENSAPOG00000015538csde19388.571ENSTNIG00000010878csde110088.571Tetraodon_nigroviridis
ENSAPOG00000015538csde19280.368ENSTBEG00000011880-6080.368Tupaia_belangeri
ENSAPOG00000015538csde110077.143ENSTTRG00000015583CSDE19477.143Tursiops_truncatus
ENSAPOG00000015538csde18973.558ENSUAMG00000024289-9973.558Ursus_americanus
ENSAPOG00000015538csde19282.237ENSUAMG00000021779-9881.818Ursus_americanus
ENSAPOG00000015538csde19772.770ENSUMAG00000011714-9973.460Ursus_maritimus
ENSAPOG00000015538csde110071.429ENSUMAG00000009720-9771.429Ursus_maritimus
ENSAPOG00000015538csde110080.233ENSVPAG00000000749CSDE17980.233Vicugna_pacos
ENSAPOG00000015538csde19374.085ENSVVUG00000009890CSDE19474.504Vulpes_vulpes
ENSAPOG00000015538csde110075.816ENSXETG00000021448csde110076.185Xenopus_tropicalis
ENSAPOG00000015538csde19494.989ENSXCOG00000000035csde19985.996Xiphophorus_couchianus
ENSAPOG00000015538csde110092.570ENSXMAG00000009080csde110092.570Xiphophorus_maculatus

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