EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000015573 (Gene tree)
Gene ID: -
Gene Symbol: lsm7
Alias: fj64g01|wu:fj64g01|zgc:66405
Full Name: LSM7 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 10620 bases
Position: chrMVNR01000977.1:55473-66092
Accession: ZDB-GENE-030131-8284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000029533	LSM	PF01423.22	1.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000032134	-	351	-	ENSAPOP00000029533	116 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000015573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000015573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000015573	lsm7	61	38.028	ENSAPOG00000009068	snrpg	83	38.028
ENSAPOG00000015573	lsm7	66	35.065	ENSAPOG00000013277	snrpg	68	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000015573	lsm7	81	95.745	ENSG00000130332	LSM7	91	95.745	Homo_sapiens
ENSAPOG00000015573	lsm7	82	93.684	ENSAMEG00000005484	LSM7	92	93.684	Ailuropoda_melanoleuca
ENSAPOG00000015573	lsm7	81	98.936	ENSACIG00000006498	lsm7	75	98.936	Amphilophus_citrinellus
ENSAPOG00000015573	lsm7	81	100.000	ENSAOCG00000001077	lsm7	86	98.947	Amphiprion_ocellaris
ENSAPOG00000015573	lsm7	81	100.000	ENSAPEG00000024447	lsm7	86	98.947	Amphiprion_percula
ENSAPOG00000015573	lsm7	81	100.000	ENSAPEG00000000694	lsm7	91	100.000	Amphiprion_percula
ENSAPOG00000015573	lsm7	81	100.000	ENSATEG00000008557	lsm7	91	100.000	Anabas_testudineus
ENSAPOG00000015573	lsm7	81	95.745	ENSANAG00000037196	-	91	95.745	Aotus_nancymaae
ENSAPOG00000015573	lsm7	81	86.170	ENSANAG00000022222	-	91	86.170	Aotus_nancymaae
ENSAPOG00000015573	lsm7	81	98.936	ENSACLG00000021021	lsm7	91	98.936	Astatotilapia_calliptera
ENSAPOG00000015573	lsm7	81	97.872	ENSAMXG00000037622	lsm7	91	97.872	Astyanax_mexicanus
ENSAPOG00000015573	lsm7	81	95.745	ENSBTAG00000004521	LSM7	91	95.745	Bos_taurus
ENSAPOG00000015573	lsm7	84	57.143	WBGene00003081	lsm-7	87	56.667	Caenorhabditis_elegans
ENSAPOG00000015573	lsm7	59	76.812	ENSCJAG00000039713	-	66	94.444	Callithrix_jacchus
ENSAPOG00000015573	lsm7	82	93.684	ENSCAFG00000019409	LSM7	92	93.684	Canis_familiaris
ENSAPOG00000015573	lsm7	82	93.684	ENSCAFG00020018168	LSM7	70	93.684	Canis_lupus_dingo
ENSAPOG00000015573	lsm7	82	94.737	ENSCHIG00000023663	LSM7	92	94.737	Capra_hircus
ENSAPOG00000015573	lsm7	55	96.875	ENSCAPG00000014534	LSM7	90	96.875	Cavia_aperea
ENSAPOG00000015573	lsm7	81	95.745	ENSCPOG00000014025	LSM7	93	95.745	Cavia_porcellus
ENSAPOG00000015573	lsm7	81	95.745	ENSCCAG00000035456	LSM7	92	95.745	Cebus_capucinus
ENSAPOG00000015573	lsm7	81	95.745	ENSCATG00000023543	LSM7	91	95.745	Cercocebus_atys
ENSAPOG00000015573	lsm7	81	95.745	ENSCLAG00000011635	LSM7	91	95.745	Chinchilla_lanigera
ENSAPOG00000015573	lsm7	81	95.745	ENSCSAG00000011599	LSM7	91	95.745	Chlorocebus_sabaeus
ENSAPOG00000015573	lsm7	56	96.923	ENSCPBG00000021317	LSM7	69	96.923	Chrysemys_picta_bellii
ENSAPOG00000015573	lsm7	79	81.522	ENSCING00000022134	-	87	82.558	Ciona_intestinalis
ENSAPOG00000015573	lsm7	81	95.745	ENSCANG00000035525	LSM7	91	95.745	Colobus_angolensis_palliatus
ENSAPOG00000015573	lsm7	81	95.745	ENSCGRG00001000807	-	91	95.745	Cricetulus_griseus_chok1gshd
ENSAPOG00000015573	lsm7	78	84.444	ENSCGRG00001016005	-	92	84.444	Cricetulus_griseus_chok1gshd
ENSAPOG00000015573	lsm7	78	84.444	ENSCGRG00000006821	-	92	84.444	Cricetulus_griseus_crigri
ENSAPOG00000015573	lsm7	83	93.750	ENSCGRG00000014355	-	91	94.737	Cricetulus_griseus_crigri
ENSAPOG00000015573	lsm7	87	95.050	ENSCSEG00000014900	lsm7	80	100.000	Cynoglossus_semilaevis
ENSAPOG00000015573	lsm7	82	97.895	ENSCVAG00000021091	lsm7	88	97.895	Cyprinodon_variegatus
ENSAPOG00000015573	lsm7	81	96.809	ENSDARG00000058328	lsm7	91	96.809	Danio_rerio
ENSAPOG00000015573	lsm7	81	94.681	ENSDORG00000024460	Lsm7	92	94.681	Dipodomys_ordii
ENSAPOG00000015573	lsm7	84	71.429	FBgn0261068	LSm7	79	73.563	Drosophila_melanogaster
ENSAPOG00000015573	lsm7	82	92.632	ENSETEG00000012788	LSM7	93	92.632	Echinops_telfairi
ENSAPOG00000015573	lsm7	82	84.211	ENSEBUG00000016992	lsm7	83	87.209	Eptatretus_burgeri
ENSAPOG00000015573	lsm7	71	58.537	ENSEBUG00000010470	-	78	58.537	Eptatretus_burgeri
ENSAPOG00000015573	lsm7	81	93.617	ENSECAG00000001440	LSM7	60	93.617	Equus_caballus
ENSAPOG00000015573	lsm7	81	94.681	ENSFCAG00000003445	LSM7	91	94.681	Felis_catus
ENSAPOG00000015573	lsm7	81	96.809	ENSFALG00000011912	LSM7	93	96.809	Ficedula_albicollis
ENSAPOG00000015573	lsm7	77	95.506	ENSFDAG00000007661	LSM7	90	95.349	Fukomys_damarensis
ENSAPOG00000015573	lsm7	81	98.936	ENSFHEG00000006349	lsm7	84	98.936	Fundulus_heteroclitus
ENSAPOG00000015573	lsm7	85	93.939	ENSGMOG00000013320	lsm7	96	93.939	Gadus_morhua
ENSAPOG00000015573	lsm7	81	98.936	ENSGAFG00000013902	lsm7	91	98.936	Gambusia_affinis
ENSAPOG00000015573	lsm7	85	94.949	ENSGACG00000010390	lsm7	96	94.949	Gasterosteus_aculeatus
ENSAPOG00000015573	lsm7	81	95.745	ENSGGOG00000010172	LSM7	91	95.745	Gorilla_gorilla
ENSAPOG00000015573	lsm7	81	98.936	ENSHBUG00000004616	lsm7	91	98.936	Haplochromis_burtoni
ENSAPOG00000015573	lsm7	81	95.745	ENSHGLG00000010587	LSM7	91	95.745	Heterocephalus_glaber_female
ENSAPOG00000015573	lsm7	81	95.745	ENSHGLG00100000852	LSM7	91	95.745	Heterocephalus_glaber_male
ENSAPOG00000015573	lsm7	81	98.936	ENSHCOG00000020252	lsm7	93	98.936	Hippocampus_comes
ENSAPOG00000015573	lsm7	84	92.857	ENSIPUG00000024724	lsm7	95	92.857	Ictalurus_punctatus
ENSAPOG00000015573	lsm7	81	95.745	ENSSTOG00000028372	LSM7	92	95.745	Ictidomys_tridecemlineatus
ENSAPOG00000015573	lsm7	83	93.750	ENSJJAG00000001936	Lsm7	91	95.745	Jaculus_jaculus
ENSAPOG00000015573	lsm7	81	98.936	ENSKMAG00000022151	lsm7	91	98.936	Kryptolebias_marmoratus
ENSAPOG00000015573	lsm7	81	100.000	ENSLBEG00000005203	lsm7	91	100.000	Labrus_bergylta
ENSAPOG00000015573	lsm7	74	95.349	ENSLACG00000015700	LSM7	92	94.737	Latimeria_chalumnae
ENSAPOG00000015573	lsm7	82	95.789	ENSLOCG00000004356	lsm7	92	95.789	Lepisosteus_oculatus
ENSAPOG00000015573	lsm7	82	94.737	ENSLAFG00000029302	LSM7	92	94.737	Loxodonta_africana
ENSAPOG00000015573	lsm7	81	95.745	ENSMFAG00000044572	LSM7	91	95.745	Macaca_fascicularis
ENSAPOG00000015573	lsm7	81	95.745	ENSMMUG00000000452	LSM7	92	95.745	Macaca_mulatta
ENSAPOG00000015573	lsm7	81	95.745	ENSMNEG00000004393	LSM7	91	95.745	Macaca_nemestrina
ENSAPOG00000015573	lsm7	81	95.745	ENSMLEG00000030852	LSM7	93	95.745	Mandrillus_leucophaeus
ENSAPOG00000015573	lsm7	81	98.936	ENSMAMG00000005410	lsm7	91	98.936	Mastacembelus_armatus
ENSAPOG00000015573	lsm7	81	98.936	ENSMZEG00005028055	lsm7	91	98.936	Maylandia_zebra
ENSAPOG00000015573	lsm7	81	96.809	ENSMGAG00000000750	LSM7	81	96.809	Meleagris_gallopavo
ENSAPOG00000015573	lsm7	81	95.745	ENSMAUG00000009276	Lsm7	91	95.745	Mesocricetus_auratus
ENSAPOG00000015573	lsm7	81	95.745	ENSMICG00000009988	-	91	95.745	Microcebus_murinus
ENSAPOG00000015573	lsm7	81	95.745	ENSMICG00000028619	-	91	95.745	Microcebus_murinus
ENSAPOG00000015573	lsm7	81	95.745	ENSMOCG00000016925	Lsm7	91	95.745	Microtus_ochrogaster
ENSAPOG00000015573	lsm7	81	100.000	ENSMMOG00000019645	lsm7	90	100.000	Mola_mola
ENSAPOG00000015573	lsm7	81	95.745	ENSMODG00000004722	LSM7	91	95.745	Monodelphis_domestica
ENSAPOG00000015573	lsm7	84	96.907	ENSMALG00000014511	lsm7	75	96.907	Monopterus_albus
ENSAPOG00000015573	lsm7	81	94.681	MGP_CAROLIEiJ_G0015607	Lsm7	91	94.681	Mus_caroli
ENSAPOG00000015573	lsm7	81	94.681	ENSMUSG00000035215	Lsm7	91	94.681	Mus_musculus
ENSAPOG00000015573	lsm7	81	94.681	MGP_PahariEiJ_G0031020	Lsm7	91	94.681	Mus_pahari
ENSAPOG00000015573	lsm7	81	94.681	MGP_SPRETEiJ_G0016425	Lsm7	91	94.681	Mus_spretus
ENSAPOG00000015573	lsm7	82	94.737	ENSMLUG00000013097	-	92	94.737	Myotis_lucifugus
ENSAPOG00000015573	lsm7	86	83.000	ENSMLUG00000024002	-	93	83.000	Myotis_lucifugus
ENSAPOG00000015573	lsm7	81	94.681	ENSNGAG00000021637	Lsm7	91	94.681	Nannospalax_galili
ENSAPOG00000015573	lsm7	87	93.069	ENSNBRG00000001237	-	81	93.069	Neolamprologus_brichardi
ENSAPOG00000015573	lsm7	84	95.876	ENSNBRG00000015770	lsm7	84	95.876	Neolamprologus_brichardi
ENSAPOG00000015573	lsm7	81	95.745	ENSNLEG00000002265	LSM7	91	95.745	Nomascus_leucogenys
ENSAPOG00000015573	lsm7	81	95.745	ENSODEG00000013590	-	91	95.745	Octodon_degus
ENSAPOG00000015573	lsm7	81	88.298	ENSODEG00000018769	-	83	87.209	Octodon_degus
ENSAPOG00000015573	lsm7	81	74.468	ENSODEG00000008190	-	82	73.256	Octodon_degus
ENSAPOG00000015573	lsm7	84	96.907	ENSONIG00000001801	lsm7	84	96.907	Oreochromis_niloticus
ENSAPOG00000015573	lsm7	81	100.000	ENSORLG00000023951	lsm7	91	100.000	Oryzias_latipes
ENSAPOG00000015573	lsm7	81	100.000	ENSORLG00020022226	lsm7	91	100.000	Oryzias_latipes_hni
ENSAPOG00000015573	lsm7	82	98.947	ENSORLG00015020044	lsm7	88	98.947	Oryzias_latipes_hsok
ENSAPOG00000015573	lsm7	81	100.000	ENSOMEG00000012806	lsm7	91	100.000	Oryzias_melastigma
ENSAPOG00000015573	lsm7	82	94.737	ENSOGAG00000000144	-	93	94.737	Otolemur_garnettii
ENSAPOG00000015573	lsm7	81	85.106	ENSOGAG00000024373	-	84	84.884	Otolemur_garnettii
ENSAPOG00000015573	lsm7	82	94.737	ENSOARG00000014013	LSM7	92	94.737	Ovis_aries
ENSAPOG00000015573	lsm7	81	95.745	ENSPPAG00000026500	LSM7	91	95.745	Pan_paniscus
ENSAPOG00000015573	lsm7	81	94.681	ENSPPRG00000008624	LSM7	91	94.681	Panthera_pardus
ENSAPOG00000015573	lsm7	81	94.681	ENSPTIG00000016252	LSM7	91	94.681	Panthera_tigris_altaica
ENSAPOG00000015573	lsm7	81	95.745	ENSPTRG00000010233	LSM7	91	95.745	Pan_troglodytes
ENSAPOG00000015573	lsm7	81	95.745	ENSPANG00000020668	LSM7	91	95.745	Papio_anubis
ENSAPOG00000015573	lsm7	81	97.872	ENSPKIG00000011325	lsm7	91	97.872	Paramormyrops_kingsleyae
ENSAPOG00000015573	lsm7	81	96.809	ENSPSIG00000017149	LSM7	82	96.809	Pelodiscus_sinensis
ENSAPOG00000015573	lsm7	81	100.000	ENSPMGG00000006498	lsm7	91	100.000	Periophthalmus_magnuspinnatus
ENSAPOG00000015573	lsm7	81	95.745	ENSPCIG00000030454	LSM7	92	95.745	Phascolarctos_cinereus
ENSAPOG00000015573	lsm7	82	97.895	ENSPFOG00000012467	lsm7	84	97.895	Poecilia_formosa
ENSAPOG00000015573	lsm7	81	98.936	ENSPLAG00000000252	lsm7	87	98.936	Poecilia_latipinna
ENSAPOG00000015573	lsm7	81	98.936	ENSPMEG00000000587	lsm7	87	98.936	Poecilia_mexicana
ENSAPOG00000015573	lsm7	68	76.250	ENSPREG00000016718	lsm7	63	77.215	Poecilia_reticulata
ENSAPOG00000015573	lsm7	81	95.745	ENSPCOG00000017177	LSM7	92	95.745	Propithecus_coquereli
ENSAPOG00000015573	lsm7	81	98.936	ENSPNYG00000006938	lsm7	91	98.936	Pundamilia_nyererei
ENSAPOG00000015573	lsm7	81	97.872	ENSPNAG00000010141	lsm7	92	97.872	Pygocentrus_nattereri
ENSAPOG00000015573	lsm7	81	95.745	ENSRNOG00000019552	Lsm7	91	95.745	Rattus_norvegicus
ENSAPOG00000015573	lsm7	81	95.745	ENSRBIG00000035978	LSM7	91	95.745	Rhinopithecus_bieti
ENSAPOG00000015573	lsm7	81	95.745	ENSRROG00000034044	LSM7	91	95.745	Rhinopithecus_roxellana
ENSAPOG00000015573	lsm7	77	47.826	YNL147W	-	75	47.674	Saccharomyces_cerevisiae
ENSAPOG00000015573	lsm7	81	95.745	ENSSBOG00000034899	LSM7	91	95.745	Saimiri_boliviensis_boliviensis
ENSAPOG00000015573	lsm7	81	95.745	ENSSFOG00015006728	lsm7	91	95.745	Scleropages_formosus
ENSAPOG00000015573	lsm7	82	98.947	ENSSMAG00000004195	lsm7	89	96.907	Scophthalmus_maximus
ENSAPOG00000015573	lsm7	81	100.000	ENSSDUG00000001863	lsm7	91	100.000	Seriola_dumerili
ENSAPOG00000015573	lsm7	81	100.000	ENSSLDG00000016339	lsm7	91	100.000	Seriola_lalandi_dorsalis
ENSAPOG00000015573	lsm7	81	100.000	ENSSPAG00000015221	lsm7	91	100.000	Stegastes_partitus
ENSAPOG00000015573	lsm7	81	95.745	ENSSSCG00000013463	LSM7	92	95.745	Sus_scrofa
ENSAPOG00000015573	lsm7	81	96.809	ENSTGUG00000000067	LSM7	93	96.809	Taeniopygia_guttata
ENSAPOG00000015573	lsm7	81	97.872	ENSTRUG00000022913	lsm7	91	97.872	Takifugu_rubripes
ENSAPOG00000015573	lsm7	81	97.872	ENSTNIG00000015525	lsm7	91	97.872	Tetraodon_nigroviridis
ENSAPOG00000015573	lsm7	58	82.090	ENSTBEG00000016602	LSM7	96	82.090	Tupaia_belangeri
ENSAPOG00000015573	lsm7	82	93.684	ENSUAMG00000000912	LSM7	79	93.684	Ursus_americanus
ENSAPOG00000015573	lsm7	82	93.684	ENSUMAG00000006556	LSM7	74	93.684	Ursus_maritimus
ENSAPOG00000015573	lsm7	55	95.312	ENSVVUG00000002640	LSM7	59	95.312	Vulpes_vulpes
ENSAPOG00000015573	lsm7	84	92.857	ENSXETG00000022166	lsm7	97	92.857	Xenopus_tropicalis
ENSAPOG00000015573	lsm7	82	97.895	ENSXCOG00000002572	lsm7	93	97.895	Xiphophorus_couchianus
ENSAPOG00000015573	lsm7	81	98.936	ENSXMAG00000018630	lsm7	91	98.936	Xiphophorus_maculatus