EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000015658 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 129958 bases
Position: chrMVNR01001118.1:60523-190480
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000012786	Fox-1_C	PF12414.8	6.6e-28	1	1
ENSAPOP00000029566	Fox-1_C	PF12414.8	1.7e-26	1	1
ENSAPOP00000012786	RRM_1	PF00076.22	1e-18	1	1
ENSAPOP00000029566	RRM_1	PF00076.22	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000032163	-	1071	-	ENSAPOP00000029566	356 (aa)	-	-
ENSAPOT00000020777	-	987	-	ENSAPOP00000012786	328 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000015658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000015658's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000015658	-	62	62.281	ENSAPOG00000016304	rbfox1l	73	55.396
ENSAPOG00000015658	-	73	52.881	ENSAPOG00000004877	rbfox2	75	47.778
ENSAPOG00000015658	-	69	55.714	ENSAPOG00000021561	-	71	56.314
ENSAPOG00000015658	-	85	61.812	ENSAPOG00000003197	rbfox1	87	58.651
ENSAPOG00000015658	-	92	70.350	ENSAPOG00000021630	rbfox3b	100	70.109

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000015658	-	80	93.103	ENSG00000167281	RBFOX3	81	89.583	Homo_sapiens
ENSAPOG00000015658	-	95	60.920	ENSAMEG00000014170	RBFOX3	92	60.383	Ailuropoda_melanoleuca
ENSAPOG00000015658	-	78	81.298	ENSACIG00000010817	rbfox3b	96	74.828	Amphilophus_citrinellus
ENSAPOG00000015658	-	79	68.750	ENSACIG00000003768	-	90	68.750	Amphilophus_citrinellus
ENSAPOG00000015658	-	94	83.791	ENSAOCG00000010786	-	100	85.124	Amphiprion_ocellaris
ENSAPOG00000015658	-	91	70.380	ENSAOCG00000012358	rbfox3b	100	70.109	Amphiprion_ocellaris
ENSAPOG00000015658	-	100	78.646	ENSAPEG00000015891	-	99	79.167	Amphiprion_percula
ENSAPOG00000015658	-	92	68.908	ENSAPEG00000019081	rbfox3b	100	68.347	Amphiprion_percula
ENSAPOG00000015658	-	79	76.895	ENSATEG00000023101	-	90	76.109	Anabas_testudineus
ENSAPOG00000015658	-	78	68.301	ENSATEG00000019945	rbfox3b	96	64.970	Anabas_testudineus
ENSAPOG00000015658	-	89	66.022	ENSACAG00000016093	RBFOX3	100	66.022	Anolis_carolinensis
ENSAPOG00000015658	-	80	93.103	ENSANAG00000023457	RBFOX3	93	69.595	Aotus_nancymaae
ENSAPOG00000015658	-	92	69.811	ENSACLG00000020011	rbfox3b	97	70.861	Astatotilapia_calliptera
ENSAPOG00000015658	-	91	75.815	ENSACLG00000025552	-	100	75.815	Astatotilapia_calliptera
ENSAPOG00000015658	-	88	66.102	ENSAMXG00000042841	rbfox3b	100	64.804	Astyanax_mexicanus
ENSAPOG00000015658	-	92	71.505	ENSAMXG00000037246	rbfox3a	100	71.968	Astyanax_mexicanus
ENSAPOG00000015658	-	63	93.103	ENSBTAG00000006280	RBFOX3	77	89.583	Bos_taurus
ENSAPOG00000015658	-	80	93.103	ENSCJAG00000009563	RBFOX3	80	89.583	Callithrix_jacchus
ENSAPOG00000015658	-	72	74.104	ENSCAFG00000005547	RBFOX3	90	74.609	Canis_familiaris
ENSAPOG00000015658	-	80	93.103	ENSCAFG00020008126	RBFOX3	77	89.583	Canis_lupus_dingo
ENSAPOG00000015658	-	64	90.625	ENSCHIG00000009124	RBFOX3	77	89.583	Capra_hircus
ENSAPOG00000015658	-	80	93.103	ENSTSYG00000029617	RBFOX3	80	91.667	Carlito_syrichta
ENSAPOG00000015658	-	50	65.868	ENSCAPG00000010217	RBFOX3	88	72.185	Cavia_aperea
ENSAPOG00000015658	-	89	58.449	ENSCPOG00000021703	RBFOX3	80	82.000	Cavia_porcellus
ENSAPOG00000015658	-	80	93.103	ENSCCAG00000028450	RBFOX3	78	89.583	Cebus_capucinus
ENSAPOG00000015658	-	89	70.707	ENSCATG00000018349	RBFOX3	93	70.270	Cercocebus_atys
ENSAPOG00000015658	-	89	59.053	ENSCLAG00000006449	RBFOX3	80	89.583	Chinchilla_lanigera
ENSAPOG00000015658	-	89	66.452	ENSCSAG00000002355	RBFOX3	93	70.270	Chlorocebus_sabaeus
ENSAPOG00000015658	-	89	65.049	ENSCPBG00000010904	RBFOX3	98	65.337	Chrysemys_picta_bellii
ENSAPOG00000015658	-	80	93.103	ENSCANG00000043120	RBFOX3	77	89.583	Colobus_angolensis_palliatus
ENSAPOG00000015658	-	80	86.207	ENSCGRG00001019476	Rbfox3	80	83.673	Cricetulus_griseus_chok1gshd
ENSAPOG00000015658	-	80	86.207	ENSCGRG00000003268	Rbfox3	80	83.673	Cricetulus_griseus_crigri
ENSAPOG00000015658	-	91	60.674	ENSCSEG00000020606	RBFOX3	100	59.155	Cynoglossus_semilaevis
ENSAPOG00000015658	-	93	77.686	ENSCSEG00000015567	RBFOX3	98	79.775	Cynoglossus_semilaevis
ENSAPOG00000015658	-	84	69.846	ENSCVAG00000006882	rbfox3b	88	68.923	Cyprinodon_variegatus
ENSAPOG00000015658	-	91	71.467	ENSDARG00000010083	rbfox3a	100	72.162	Danio_rerio
ENSAPOG00000015658	-	80	73.585	ENSDARG00000074310	rbfox3b	91	71.127	Danio_rerio
ENSAPOG00000015658	-	69	59.028	ENSDNOG00000039391	RBFOX3	74	89.583	Dasypus_novemcinctus
ENSAPOG00000015658	-	89	50.562	ENSDORG00000005352	Rbfox3	77	83.333	Dipodomys_ordii
ENSAPOG00000015658	-	84	56.851	ENSEBUG00000002129	RBFOX3	97	55.769	Eptatretus_burgeri
ENSAPOG00000015658	-	63	56.808	ENSEBUG00000013559	RBFOX3	57	55.450	Eptatretus_burgeri
ENSAPOG00000015658	-	89	67.308	ENSEASG00005005059	RBFOX3	98	69.775	Equus_asinus_asinus
ENSAPOG00000015658	-	89	66.987	ENSECAG00000023811	RBFOX3	93	71.717	Equus_caballus
ENSAPOG00000015658	-	66	87.500	ENSEEUG00000013974	RBFOX3	66	87.500	Erinaceus_europaeus
ENSAPOG00000015658	-	92	69.272	ENSELUG00000017963	rbfox3b	97	69.003	Esox_lucius
ENSAPOG00000015658	-	89	66.452	ENSFCAG00000002555	RBFOX3	100	66.391	Felis_catus
ENSAPOG00000015658	-	88	51.206	ENSFALG00000012288	RBFOX3	98	49.877	Ficedula_albicollis
ENSAPOG00000015658	-	89	54.469	ENSFDAG00000007489	RBFOX3	80	82.000	Fukomys_damarensis
ENSAPOG00000015658	-	78	67.399	ENSFHEG00000008550	rbfox3b	89	64.789	Fundulus_heteroclitus
ENSAPOG00000015658	-	68	91.667	ENSGMOG00000019304	-	64	91.667	Gadus_morhua
ENSAPOG00000015658	-	91	63.904	ENSGALG00000032889	RBFOX3	100	67.313	Gallus_gallus
ENSAPOG00000015658	-	92	73.143	ENSGAFG00000005025	rbfox3b	100	72.857	Gambusia_affinis
ENSAPOG00000015658	-	79	95.833	ENSGACG00000002138	-	76	80.531	Gasterosteus_aculeatus
ENSAPOG00000015658	-	97	60.598	ENSGAGG00000020025	RBFOX3	97	67.308	Gopherus_agassizii
ENSAPOG00000015658	-	80	93.103	ENSGGOG00000012546	RBFOX3	77	89.583	Gorilla_gorilla
ENSAPOG00000015658	-	92	69.811	ENSHBUG00000018099	rbfox3b	97	69.811	Haplochromis_burtoni
ENSAPOG00000015658	-	86	74.622	ENSHBUG00000023098	-	97	71.307	Haplochromis_burtoni
ENSAPOG00000015658	-	89	57.300	ENSHGLG00000008679	RBFOX3	80	80.769	Heterocephalus_glaber_female
ENSAPOG00000015658	-	89	53.719	ENSHGLG00100014739	RBFOX3	77	78.431	Heterocephalus_glaber_male
ENSAPOG00000015658	-	82	77.491	ENSHCOG00000001863	RBFOX3	89	75.085	Hippocampus_comes
ENSAPOG00000015658	-	81	68.794	ENSHCOG00000007444	RBFOX3	82	63.208	Hippocampus_comes
ENSAPOG00000015658	-	91	70.109	ENSIPUG00000012010	rbfox3a	100	70.811	Ictalurus_punctatus
ENSAPOG00000015658	-	78	61.168	ENSIPUG00000021966	rbfox3b	93	63.052	Ictalurus_punctatus
ENSAPOG00000015658	-	89	54.516	ENSSTOG00000026817	RBFOX3	93	65.000	Ictidomys_tridecemlineatus
ENSAPOG00000015658	-	80	93.103	ENSJJAG00000014167	Rbfox3	80	89.583	Jaculus_jaculus
ENSAPOG00000015658	-	91	70.109	ENSKMAG00000006726	rbfox3b	100	69.837	Kryptolebias_marmoratus
ENSAPOG00000015658	-	91	76.694	ENSLBEG00000022508	-	100	77.989	Labrus_bergylta
ENSAPOG00000015658	-	92	69.169	ENSLBEG00000004030	rbfox3b	91	78.623	Labrus_bergylta
ENSAPOG00000015658	-	90	56.701	ENSLACG00000018409	-	98	57.216	Latimeria_chalumnae
ENSAPOG00000015658	-	84	72.393	ENSLOCG00000012267	rbfox3a	98	72.699	Lepisosteus_oculatus
ENSAPOG00000015658	-	89	62.242	ENSLAFG00000016623	RBFOX3	77	89.583	Loxodonta_africana
ENSAPOG00000015658	-	65	93.103	ENSMFAG00000002247	RBFOX3	80	89.583	Macaca_fascicularis
ENSAPOG00000015658	-	80	93.103	ENSMMUG00000023028	RBFOX3	78	89.583	Macaca_mulatta
ENSAPOG00000015658	-	89	65.484	ENSMNEG00000041147	RBFOX3	93	69.932	Macaca_nemestrina
ENSAPOG00000015658	-	89	65.806	ENSMLEG00000025686	RBFOX3	93	70.270	Mandrillus_leucophaeus
ENSAPOG00000015658	-	91	72.434	ENSMAMG00000020600	-	98	72.727	Mastacembelus_armatus
ENSAPOG00000015658	-	78	76.923	ENSMAMG00000019810	rbfox3b	96	70.833	Mastacembelus_armatus
ENSAPOG00000015658	-	92	69.811	ENSMZEG00005000781	rbfox3b	100	69.837	Maylandia_zebra
ENSAPOG00000015658	-	75	65.064	ENSMZEG00005003055	-	80	65.803	Maylandia_zebra
ENSAPOG00000015658	-	56	61.187	ENSMGAG00000005600	RBFOX3	83	61.644	Meleagris_gallopavo
ENSAPOG00000015658	-	89	57.382	ENSMAUG00000013543	Rbfox3	83	83.333	Mesocricetus_auratus
ENSAPOG00000015658	-	80	93.103	ENSMICG00000014898	RBFOX3	94	70.270	Microcebus_murinus
ENSAPOG00000015658	-	89	58.380	ENSMOCG00000015373	Rbfox3	80	87.500	Microtus_ochrogaster
ENSAPOG00000015658	-	94	68.293	ENSMMOG00000020193	rbfox3b	98	68.835	Mola_mola
ENSAPOG00000015658	-	89	64.641	ENSMODG00000002089	RBFOX3	100	66.298	Monodelphis_domestica
ENSAPOG00000015658	-	91	69.565	ENSMALG00000020407	rbfox3b	100	69.293	Monopterus_albus
ENSAPOG00000015658	-	95	74.479	ENSMALG00000018270	-	90	87.589	Monopterus_albus
ENSAPOG00000015658	-	89	68.489	MGP_CAROLIEiJ_G0017487	Rbfox3	80	87.500	Mus_caroli
ENSAPOG00000015658	-	89	68.167	ENSMUSG00000025576	Rbfox3	80	87.500	Mus_musculus
ENSAPOG00000015658	-	80	89.655	MGP_PahariEiJ_G0018614	Rbfox3	85	82.114	Mus_pahari
ENSAPOG00000015658	-	89	68.810	MGP_SPRETEiJ_G0018331	Rbfox3	80	89.583	Mus_spretus
ENSAPOG00000015658	-	86	58.808	ENSMPUG00000012319	RBFOX3	96	59.459	Mustela_putorius_furo
ENSAPOG00000015658	-	89	59.497	ENSNGAG00000018006	Rbfox3	80	89.583	Nannospalax_galili
ENSAPOG00000015658	-	87	73.684	ENSNBRG00000022885	-	93	73.684	Neolamprologus_brichardi
ENSAPOG00000015658	-	92	66.947	ENSNBRG00000010102	rbfox3b	100	66.947	Neolamprologus_brichardi
ENSAPOG00000015658	-	89	50.842	ENSNLEG00000000153	-	92	59.854	Nomascus_leucogenys
ENSAPOG00000015658	-	86	83.333	ENSMEUG00000004218	-	74	89.583	Notamacropus_eugenii
ENSAPOG00000015658	-	52	77.333	ENSOPRG00000016279	-	58	77.124	Ochotona_princeps
ENSAPOG00000015658	-	89	68.810	ENSODEG00000009433	RBFOX3	79	89.583	Octodon_degus
ENSAPOG00000015658	-	84	70.154	ENSONIG00000009549	rbfox3b	88	69.231	Oreochromis_niloticus
ENSAPOG00000015658	-	90	71.264	ENSONIG00000007282	-	95	75.077	Oreochromis_niloticus
ENSAPOG00000015658	-	69	53.710	ENSOCUG00000014217	RBFOX3	52	83.333	Oryctolagus_cuniculus
ENSAPOG00000015658	-	91	70.190	ENSORLG00000000905	rbfox3b	79	69.377	Oryzias_latipes
ENSAPOG00000015658	-	91	70.190	ENSORLG00020018030	rbfox3b	99	69.377	Oryzias_latipes_hni
ENSAPOG00000015658	-	91	69.919	ENSORLG00015009200	rbfox3b	99	69.648	Oryzias_latipes_hsok
ENSAPOG00000015658	-	74	66.559	ENSOMEG00000014677	rbfox3b	85	67.077	Oryzias_melastigma
ENSAPOG00000015658	-	92	60.440	ENSOGAG00000029595	RBFOX3	97	61.096	Otolemur_garnettii
ENSAPOG00000015658	-	57	56.444	ENSOARG00000002908	RBFOX3	89	50.143	Ovis_aries
ENSAPOG00000015658	-	71	67.647	ENSPPAG00000025383	RBFOX3	88	68.750	Pan_paniscus
ENSAPOG00000015658	-	89	53.714	ENSPPRG00000007819	RBFOX3	81	85.417	Panthera_pardus
ENSAPOG00000015658	-	80	93.103	ENSPTRG00000009727	RBFOX3	77	89.583	Pan_troglodytes
ENSAPOG00000015658	-	89	65.806	ENSPANG00000019837	RBFOX3	93	70.270	Papio_anubis
ENSAPOG00000015658	-	93	68.466	ENSPKIG00000010299	rbfox3a	93	68.750	Paramormyrops_kingsleyae
ENSAPOG00000015658	-	84	57.778	ENSPKIG00000022633	-	97	54.062	Paramormyrops_kingsleyae
ENSAPOG00000015658	-	78	66.987	ENSPMGG00000008000	rbfox3b	96	67.961	Periophthalmus_magnuspinnatus
ENSAPOG00000015658	-	89	58.659	ENSPEMG00000010500	Rbfox3	80	87.500	Peromyscus_maniculatus_bairdii
ENSAPOG00000015658	-	89	57.805	ENSPCIG00000005766	RBFOX3	85	89.583	Phascolarctos_cinereus
ENSAPOG00000015658	-	78	89.583	ENSPFOG00000018294	rbfox3b	70	88.235	Poecilia_formosa
ENSAPOG00000015658	-	69	84.211	ENSPLAG00000000481	rbfox3b	76	81.277	Poecilia_latipinna
ENSAPOG00000015658	-	78	67.033	ENSPMEG00000022997	rbfox3b	96	62.458	Poecilia_mexicana
ENSAPOG00000015658	-	92	70.430	ENSPREG00000012886	rbfox3b	100	70.430	Poecilia_reticulata
ENSAPOG00000015658	-	71	61.864	ENSPPYG00000008704	RBFOX3	74	71.784	Pongo_abelii
ENSAPOG00000015658	-	71	87.500	ENSPCAG00000001401	RBFOX3	81	87.500	Procavia_capensis
ENSAPOG00000015658	-	80	93.103	ENSPCOG00000012689	RBFOX3	79	89.583	Propithecus_coquereli
ENSAPOG00000015658	-	80	86.207	ENSPVAG00000015243	RBFOX3	81	83.673	Pteropus_vampyrus
ENSAPOG00000015658	-	92	66.947	ENSPNYG00000010414	rbfox3b	100	66.947	Pundamilia_nyererei
ENSAPOG00000015658	-	94	76.374	ENSPNYG00000009079	-	100	75.339	Pundamilia_nyererei
ENSAPOG00000015658	-	92	71.505	ENSPNAG00000002889	rbfox3a	100	72.237	Pygocentrus_nattereri
ENSAPOG00000015658	-	90	60.333	ENSPNAG00000018173	rbfox3b	80	63.235	Pygocentrus_nattereri
ENSAPOG00000015658	-	80	89.655	ENSRNOG00000003386	Rbfox3	93	71.044	Rattus_norvegicus
ENSAPOG00000015658	-	89	71.380	ENSRBIG00000040449	RBFOX3	100	66.942	Rhinopithecus_bieti
ENSAPOG00000015658	-	89	66.452	ENSRROG00000000766	RBFOX3	93	70.270	Rhinopithecus_roxellana
ENSAPOG00000015658	-	80	93.103	ENSSBOG00000031591	RBFOX3	80	89.583	Saimiri_boliviensis_boliviensis
ENSAPOG00000015658	-	89	57.468	ENSSHAG00000016076	RBFOX3	96	56.190	Sarcophilus_harrisii
ENSAPOG00000015658	-	89	54.696	ENSSFOG00015004716	RBFOX3	100	57.022	Scleropages_formosus
ENSAPOG00000015658	-	84	72.393	ENSSFOG00015023260	rbfox3a	100	65.583	Scleropages_formosus
ENSAPOG00000015658	-	91	74.728	ENSSMAG00000019052	-	100	74.728	Scophthalmus_maximus
ENSAPOG00000015658	-	90	62.534	ENSSMAG00000012618	rbfox3b	77	65.497	Scophthalmus_maximus
ENSAPOG00000015658	-	92	75.698	ENSSDUG00000015801	-	99	77.031	Seriola_dumerili
ENSAPOG00000015658	-	78	67.399	ENSSDUG00000023183	rbfox3b	89	64.789	Seriola_dumerili
ENSAPOG00000015658	-	91	70.652	ENSSLDG00000000149	rbfox3b	100	70.380	Seriola_lalandi_dorsalis
ENSAPOG00000015658	-	92	79.050	ENSSLDG00000016098	-	99	80.672	Seriola_lalandi_dorsalis
ENSAPOG00000015658	-	79	71.377	ENSSPUG00000011733	RBFOX3	92	71.186	Sphenodon_punctatus
ENSAPOG00000015658	-	92	76.316	ENSSPAG00000017571	rbfox3b	100	76.023	Stegastes_partitus
ENSAPOG00000015658	-	70	87.347	ENSSPAG00000004898	-	74	87.347	Stegastes_partitus
ENSAPOG00000015658	-	80	73.852	ENSSSCG00000039498	RBFOX3	79	90.196	Sus_scrofa
ENSAPOG00000015658	-	94	59.331	ENSTRUG00000004894	rbfox3b	96	61.345	Takifugu_rubripes
ENSAPOG00000015658	-	85	62.431	ENSTNIG00000011278	rbfox3b	90	61.602	Tetraodon_nigroviridis
ENSAPOG00000015658	-	63	93.103	ENSTTRG00000003676	RBFOX3	80	89.583	Tursiops_truncatus
ENSAPOG00000015658	-	89	67.419	ENSUAMG00000004668	RBFOX3	93	70.946	Ursus_americanus
ENSAPOG00000015658	-	81	93.103	ENSVVUG00000017864	RBFOX3	85	89.583	Vulpes_vulpes
ENSAPOG00000015658	-	91	49.086	ENSXETG00000020236	rbfox3	97	49.870	Xenopus_tropicalis
ENSAPOG00000015658	-	78	80.769	ENSXCOG00000018262	rbfox3b	97	74.306	Xiphophorus_couchianus
ENSAPOG00000015658	-	92	70.620	ENSXMAG00000012939	rbfox3b	97	70.350	Xiphophorus_maculatus