EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000015837 (Gene tree)
Gene ID: 110959046
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 35091 bases
Position: chrMVNR01000661.1:272283-307373
Accession: 110959046
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000029695	Upf2	PF04050.14	5.4e-33	1	1
ENSAPOP00000029695	MIF4G	PF02854.19	1.3e-62	1	3
ENSAPOP00000029695	MIF4G	PF02854.19	1.3e-62	2	3
ENSAPOP00000029695	MIF4G	PF02854.19	1.3e-62	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000021051	UPF2-201	3648	XM_022205787	ENSAPOP00000029695	1215 (aa)	XP_022061479	-

Gene Model

Click here to download ENSAPOG00000015837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000015837's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000015837	UPF2	100	78.169	ENSG00000151461	UPF2	99	78.326	Homo_sapiens
ENSAPOG00000015837	UPF2	100	78.857	ENSAMEG00000004586	UPF2	99	79.013	Ailuropoda_melanoleuca
ENSAPOG00000015837	UPF2	100	90.831	ENSACIG00000018078	UPF2	100	90.838	Amphilophus_citrinellus
ENSAPOG00000015837	UPF2	100	95.433	ENSAOCG00000016766	UPF2	100	95.433	Amphiprion_ocellaris
ENSAPOG00000015837	UPF2	100	95.513	ENSAPEG00000019084	UPF2	100	95.513	Amphiprion_percula
ENSAPOG00000015837	UPF2	100	90.361	ENSATEG00000021677	UPF2	99	90.752	Anabas_testudineus
ENSAPOG00000015837	UPF2	100	77.356	ENSAPLG00000010287	UPF2	90	81.842	Anas_platyrhynchos
ENSAPOG00000015837	UPF2	100	78.622	ENSACAG00000009259	UPF2	99	78.778	Anolis_carolinensis
ENSAPOG00000015837	UPF2	91	74.313	ENSANAG00000028451	UPF2	93	74.572	Aotus_nancymaae
ENSAPOG00000015837	UPF2	100	90.282	ENSACLG00000012696	UPF2	99	90.290	Astatotilapia_calliptera
ENSAPOG00000015837	UPF2	100	83.699	ENSAMXG00000013700	UPF2	99	83.934	Astyanax_mexicanus
ENSAPOG00000015837	UPF2	100	78.778	ENSBTAG00000000288	UPF2	99	78.778	Bos_taurus
ENSAPOG00000015837	UPF2	100	77.645	ENSCJAG00000020685	UPF2	99	77.525	Callithrix_jacchus
ENSAPOG00000015837	UPF2	100	78.857	ENSCAFG00000004839	UPF2	99	79.013	Canis_familiaris
ENSAPOG00000015837	UPF2	100	79.888	ENSCAFG00020005882	UPF2	100	79.968	Canis_lupus_dingo
ENSAPOG00000015837	UPF2	100	78.778	ENSCHIG00000020359	UPF2	99	78.935	Capra_hircus
ENSAPOG00000015837	UPF2	100	78.686	ENSTSYG00000000935	UPF2	100	78.285	Carlito_syrichta
ENSAPOG00000015837	UPF2	91	70.884	ENSCAPG00000016658	UPF2	95	70.873	Cavia_aperea
ENSAPOG00000015837	UPF2	99	76.270	ENSCPOG00000008809	UPF2	100	76.667	Cavia_porcellus
ENSAPOG00000015837	UPF2	100	75.120	ENSCCAG00000035991	UPF2	99	74.880	Cebus_capucinus
ENSAPOG00000015837	UPF2	100	78.326	ENSCATG00000032679	UPF2	99	78.482	Cercocebus_atys
ENSAPOG00000015837	UPF2	100	77.900	ENSCLAG00000011434	UPF2	99	77.978	Chinchilla_lanigera
ENSAPOG00000015837	UPF2	100	78.326	ENSCSAG00000013372	UPF2	99	78.482	Chlorocebus_sabaeus
ENSAPOG00000015837	UPF2	79	82.243	ENSCHOG00000000422	UPF2	78	85.714	Choloepus_hoffmanni
ENSAPOG00000015837	UPF2	100	77.255	ENSCPBG00000027823	UPF2	100	77.412	Chrysemys_picta_bellii
ENSAPOG00000015837	UPF2	78	47.379	ENSCSAVG00000007772	-	78	48.705	Ciona_savignyi
ENSAPOG00000015837	UPF2	100	74.744	ENSCANG00000040396	UPF2	100	73.643	Colobus_angolensis_palliatus
ENSAPOG00000015837	UPF2	100	78.448	ENSCGRG00001019347	Upf2	99	78.605	Cricetulus_griseus_chok1gshd
ENSAPOG00000015837	UPF2	100	78.448	ENSCGRG00000017993	Upf2	99	78.605	Cricetulus_griseus_crigri
ENSAPOG00000015837	UPF2	99	85.897	ENSCSEG00000003520	UPF2	99	85.256	Cynoglossus_semilaevis
ENSAPOG00000015837	UPF2	99	88.574	ENSCVAG00000006167	UPF2	100	88.933	Cyprinodon_variegatus
ENSAPOG00000015837	UPF2	100	78.622	ENSDNOG00000018160	UPF2	99	78.778	Dasypus_novemcinctus
ENSAPOG00000015837	UPF2	100	78.292	ENSDORG00000002478	Upf2	99	78.448	Dipodomys_ordii
ENSAPOG00000015837	UPF2	89	35.079	FBgn0029992	Upf2	90	37.908	Drosophila_melanogaster
ENSAPOG00000015837	UPF2	58	92.647	ENSETEG00000011583	-	62	92.647	Echinops_telfairi
ENSAPOG00000015837	UPF2	65	72.185	ENSEBUG00000012448	-	97	63.229	Eptatretus_burgeri
ENSAPOG00000015837	UPF2	100	78.056	ENSEASG00005019274	UPF2	99	78.654	Equus_asinus_asinus
ENSAPOG00000015837	UPF2	100	78.056	ENSECAG00000017022	UPF2	99	78.213	Equus_caballus
ENSAPOG00000015837	UPF2	77	73.620	ENSEEUG00000007819	UPF2	68	79.487	Erinaceus_europaeus
ENSAPOG00000015837	UPF2	100	83.997	ENSELUG00000012014	UPF2	99	85.500	Esox_lucius
ENSAPOG00000015837	UPF2	100	85.635	ENSFCAG00000005785	UPF2	99	78.935	Felis_catus
ENSAPOG00000015837	UPF2	100	79.170	ENSFALG00000001889	UPF2	98	80.031	Ficedula_albicollis
ENSAPOG00000015837	UPF2	100	77.255	ENSFDAG00000014348	UPF2	99	77.333	Fukomys_damarensis
ENSAPOG00000015837	UPF2	99	88.565	ENSFHEG00000009826	UPF2	99	88.924	Fundulus_heteroclitus
ENSAPOG00000015837	UPF2	90	85.391	ENSGMOG00000005557	UPF2	100	83.896	Gadus_morhua
ENSAPOG00000015837	UPF2	100	79.186	ENSGALG00000033772	UPF2	99	80.094	Gallus_gallus
ENSAPOG00000015837	UPF2	100	87.991	ENSGAFG00000020867	UPF2	99	88.462	Gambusia_affinis
ENSAPOG00000015837	UPF2	100	89.176	ENSGACG00000001080	UPF2	100	89.725	Gasterosteus_aculeatus
ENSAPOG00000015837	UPF2	100	78.230	ENSGAGG00000002700	UPF2	99	78.387	Gopherus_agassizii
ENSAPOG00000015837	UPF2	100	78.169	ENSGGOG00000001479	UPF2	99	78.326	Gorilla_gorilla
ENSAPOG00000015837	UPF2	100	90.361	ENSHBUG00000004249	UPF2	100	90.368	Haplochromis_burtoni
ENSAPOG00000015837	UPF2	100	68.755	ENSHGLG00000003822	-	99	68.755	Heterocephalus_glaber_female
ENSAPOG00000015837	UPF2	100	77.038	ENSHGLG00000015176	-	99	77.508	Heterocephalus_glaber_female
ENSAPOG00000015837	UPF2	100	74.745	ENSHGLG00100010036	UPF2	100	73.705	Heterocephalus_glaber_male
ENSAPOG00000015837	UPF2	100	85.927	ENSHCOG00000004025	UPF2	99	86.317	Hippocampus_comes
ENSAPOG00000015837	UPF2	100	83.659	ENSIPUG00000015524	UPF2	99	81.861	Ictalurus_punctatus
ENSAPOG00000015837	UPF2	100	78.448	ENSSTOG00000013075	UPF2	99	78.605	Ictidomys_tridecemlineatus
ENSAPOG00000015837	UPF2	100	75.432	ENSJJAG00000004913	Upf2	99	78.118	Jaculus_jaculus
ENSAPOG00000015837	UPF2	99	88.389	ENSKMAG00000001071	UPF2	99	88.784	Kryptolebias_marmoratus
ENSAPOG00000015837	UPF2	82	89.289	ENSLBEG00000000728	-	93	90.049	Labrus_bergylta
ENSAPOG00000015837	UPF2	100	91.707	ENSLBEG00000016394	-	100	91.143	Labrus_bergylta
ENSAPOG00000015837	UPF2	99	72.374	ENSLACG00000015945	UPF2	100	73.032	Latimeria_chalumnae
ENSAPOG00000015837	UPF2	99	82.413	ENSLOCG00000015698	UPF2	99	82.413	Lepisosteus_oculatus
ENSAPOG00000015837	UPF2	100	78.326	ENSMFAG00000043865	UPF2	99	78.482	Macaca_fascicularis
ENSAPOG00000015837	UPF2	100	78.326	ENSMMUG00000008241	UPF2	99	78.482	Macaca_mulatta
ENSAPOG00000015837	UPF2	81	80.255	ENSMNEG00000008062	UPF2	99	80.157	Macaca_nemestrina
ENSAPOG00000015837	UPF2	100	77.087	ENSMLEG00000036120	UPF2	100	76.299	Mandrillus_leucophaeus
ENSAPOG00000015837	UPF2	100	92.382	ENSMAMG00000018276	UPF2	100	92.486	Mastacembelus_armatus
ENSAPOG00000015837	UPF2	100	90.282	ENSMZEG00005021595	UPF2	99	90.290	Maylandia_zebra
ENSAPOG00000015837	UPF2	99	78.695	ENSMGAG00000004573	UPF2	99	79.373	Meleagris_gallopavo
ENSAPOG00000015837	UPF2	100	76.411	ENSMAUG00000016512	Upf2	99	76.567	Mesocricetus_auratus
ENSAPOG00000015837	UPF2	100	79.647	ENSMICG00000001716	UPF2	100	79.888	Microcebus_murinus
ENSAPOG00000015837	UPF2	100	77.647	ENSMOCG00000008263	Upf2	99	77.725	Microtus_ochrogaster
ENSAPOG00000015837	UPF2	100	90.821	ENSMMOG00000006528	UPF2	100	90.660	Mola_mola
ENSAPOG00000015837	UPF2	100	76.273	ENSMODG00000016794	UPF2	99	78.935	Monodelphis_domestica
ENSAPOG00000015837	UPF2	100	91.640	ENSMALG00000002663	UPF2	100	91.799	Monopterus_albus
ENSAPOG00000015837	UPF2	100	78.292	MGP_CAROLIEiJ_G0023157	Upf2	99	80.262	Mus_caroli
ENSAPOG00000015837	UPF2	100	78.605	ENSMUSG00000043241	Upf2	99	80.418	Mus_musculus
ENSAPOG00000015837	UPF2	100	78.605	MGP_PahariEiJ_G0019217	Upf2	99	80.418	Mus_pahari
ENSAPOG00000015837	UPF2	100	78.762	MGP_SPRETEiJ_G0024075	Upf2	99	80.418	Mus_spretus
ENSAPOG00000015837	UPF2	100	78.700	ENSMPUG00000001064	UPF2	99	78.857	Mustela_putorius_furo
ENSAPOG00000015837	UPF2	100	78.030	ENSMLUG00000000228	UPF2	100	78.298	Myotis_lucifugus
ENSAPOG00000015837	UPF2	100	90.361	ENSNBRG00000013629	UPF2	99	90.368	Neolamprologus_brichardi
ENSAPOG00000015837	UPF2	100	78.247	ENSNLEG00000012058	UPF2	100	77.663	Nomascus_leucogenys
ENSAPOG00000015837	UPF2	73	94.366	ENSOPRG00000006801	-	73	94.366	Ochotona_princeps
ENSAPOG00000015837	UPF2	100	77.508	ENSODEG00000001290	UPF2	99	77.561	Octodon_degus
ENSAPOG00000015837	UPF2	100	89.969	ENSONIG00000017991	UPF2	99	89.977	Oreochromis_niloticus
ENSAPOG00000015837	UPF2	100	77.301	ENSOCUG00000006230	UPF2	100	76.443	Oryctolagus_cuniculus
ENSAPOG00000015837	UPF2	100	87.529	ENSORLG00000017189	UPF2	99	87.451	Oryzias_latipes
ENSAPOG00000015837	UPF2	100	87.608	ENSORLG00020005969	UPF2	99	87.529	Oryzias_latipes_hni
ENSAPOG00000015837	UPF2	100	87.608	ENSORLG00015005713	UPF2	99	87.529	Oryzias_latipes_hsok
ENSAPOG00000015837	UPF2	100	84.144	ENSOMEG00000023420	UPF2	98	84.458	Oryzias_melastigma
ENSAPOG00000015837	UPF2	100	78.465	ENSOGAG00000005796	UPF2	99	78.387	Otolemur_garnettii
ENSAPOG00000015837	UPF2	100	78.549	ENSOARG00000014587	UPF2	99	78.733	Ovis_aries
ENSAPOG00000015837	UPF2	100	76.457	ENSPPAG00000037953	UPF2	100	75.529	Pan_paniscus
ENSAPOG00000015837	UPF2	100	78.778	ENSPPRG00000000690	UPF2	99	78.935	Panthera_pardus
ENSAPOG00000015837	UPF2	100	78.778	ENSPTIG00000008867	UPF2	99	78.935	Panthera_tigris_altaica
ENSAPOG00000015837	UPF2	100	78.169	ENSPTRG00000002291	UPF2	99	78.326	Pan_troglodytes
ENSAPOG00000015837	UPF2	100	78.326	ENSPANG00000023399	UPF2	99	78.482	Papio_anubis
ENSAPOG00000015837	UPF2	100	82.252	ENSPKIG00000025502	UPF2	99	80.375	Paramormyrops_kingsleyae
ENSAPOG00000015837	UPF2	60	77.339	ENSPSIG00000015158	UPF2	95	77.207	Pelodiscus_sinensis
ENSAPOG00000015837	UPF2	100	85.478	ENSPMGG00000005259	UPF2	100	86.267	Periophthalmus_magnuspinnatus
ENSAPOG00000015837	UPF2	93	76.369	ENSPEMG00000015731	Upf2	99	76.369	Peromyscus_maniculatus_bairdii
ENSAPOG00000015837	UPF2	81	80.728	ENSPCIG00000006656	UPF2	100	78.750	Phascolarctos_cinereus
ENSAPOG00000015837	UPF2	100	88.185	ENSPFOG00000017118	UPF2	99	88.540	Poecilia_formosa
ENSAPOG00000015837	UPF2	100	88.263	ENSPLAG00000005094	UPF2	99	88.619	Poecilia_latipinna
ENSAPOG00000015837	UPF2	100	88.106	ENSPMEG00000017009	UPF2	99	88.462	Poecilia_mexicana
ENSAPOG00000015837	UPF2	100	88.477	ENSPREG00000021880	UPF2	100	88.713	Poecilia_reticulata
ENSAPOG00000015837	UPF2	64	78.520	ENSPPYG00000002089	-	99	78.759	Pongo_abelii
ENSAPOG00000015837	UPF2	91	76.141	ENSPCAG00000000684	UPF2	89	76.763	Procavia_capensis
ENSAPOG00000015837	UPF2	100	78.926	ENSPCOG00000021656	UPF2	100	78.766	Propithecus_coquereli
ENSAPOG00000015837	UPF2	100	74.491	ENSPVAG00000017286	UPF2	99	74.648	Pteropus_vampyrus
ENSAPOG00000015837	UPF2	100	87.774	ENSPNYG00000017096	UPF2	100	88.166	Pundamilia_nyererei
ENSAPOG00000015837	UPF2	100	83.737	ENSPNAG00000009357	UPF2	100	83.635	Pygocentrus_nattereri
ENSAPOG00000015837	UPF2	100	74.415	ENSRNOG00000023593	Upf2	98	94.318	Rattus_norvegicus
ENSAPOG00000015837	UPF2	100	77.194	ENSRBIG00000037780	UPF2	100	77.273	Rhinopithecus_bieti
ENSAPOG00000015837	UPF2	100	78.152	ENSRROG00000043547	UPF2	99	78.230	Rhinopithecus_roxellana
ENSAPOG00000015837	UPF2	100	78.045	ENSSBOG00000020012	UPF2	99	77.404	Saimiri_boliviensis_boliviensis
ENSAPOG00000015837	UPF2	100	81.668	ENSSFOG00015023788	upf2	100	82.061	Scleropages_formosus
ENSAPOG00000015837	UPF2	89	93.606	ENSSMAG00000007637	UPF2	100	88.125	Scophthalmus_maximus
ENSAPOG00000015837	UPF2	100	93.961	ENSSDUG00000017244	UPF2	100	93.564	Seriola_dumerili
ENSAPOG00000015837	UPF2	100	94.122	ENSSLDG00000016866	UPF2	100	94.122	Seriola_lalandi_dorsalis
ENSAPOG00000015837	UPF2	100	77.447	ENSSARG00000008615	UPF2	99	77.760	Sorex_araneus
ENSAPOG00000015837	UPF2	100	80.551	ENSSPUG00000014544	UPF2	99	80.470	Sphenodon_punctatus
ENSAPOG00000015837	UPF2	67	78.506	ENSSSCG00000011117	-	99	77.904	Sus_scrofa
ENSAPOG00000015837	UPF2	99	79.310	ENSTGUG00000002163	-	100	79.859	Taeniopygia_guttata
ENSAPOG00000015837	UPF2	100	87.931	ENSTRUG00000007519	UPF2	99	88.323	Takifugu_rubripes
ENSAPOG00000015837	UPF2	100	84.820	ENSTNIG00000004453	UPF2	78	87.438	Tetraodon_nigroviridis
ENSAPOG00000015837	UPF2	93	69.840	ENSTBEG00000012679	UPF2	93	70.598	Tupaia_belangeri
ENSAPOG00000015837	UPF2	100	77.665	ENSTTRG00000016388	UPF2	99	77.821	Tursiops_truncatus
ENSAPOG00000015837	UPF2	88	94.382	ENSUAMG00000023560	UPF2	95	94.382	Ursus_americanus
ENSAPOG00000015837	UPF2	100	78.778	ENSUMAG00000012953	UPF2	95	78.935	Ursus_maritimus
ENSAPOG00000015837	UPF2	84	96.774	ENSVPAG00000006763	UPF2	82	96.774	Vicugna_pacos
ENSAPOG00000015837	UPF2	100	78.857	ENSVVUG00000006166	UPF2	99	79.013	Vulpes_vulpes
ENSAPOG00000015837	UPF2	100	73.668	ENSXETG00000033103	UPF2	91	79.432	Xenopus_tropicalis
ENSAPOG00000015837	UPF2	100	88.106	ENSXCOG00000011604	UPF2	100	88.462	Xiphophorus_couchianus
ENSAPOG00000015837	UPF2	100	88.263	ENSXMAG00000017209	UPF2	99	88.619	Xiphophorus_maculatus