EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000016035 (Gene tree)
Gene ID: 110962034
Gene Symbol: smarca5
Alias: SWI/SNF related|matrix associated|actin dependent regulator of chromatin A5|chunp6878|fb26d12|fb49g04|im:7146484|wu:fb26d12|wu:fb49g04|zgc:158434
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 15579 bases
Position: chrMVNR01000976.1:93847-109425
Accession: 110962034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000029781	ResIII	PF04851.15	8.8e-11	1	1
ENSAPOP00000013176	ResIII	PF04851.15	9.3e-11	1	1
ENSAPOP00000029781	DEAD	PF00270.29	5.6e-06	1	1
ENSAPOP00000013176	DEAD	PF00270.29	7.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000021247	-	5533	XM_022209881	ENSAPOP00000013176	1036 (aa)	XP_022065573	UPI000B9077CC
ENSAPOT00000021241	-	2787	-	ENSAPOP00000029781	928 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000016035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000016035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000016035	smarca5	64	39.733	ENSAPOG00000001539	chd1l	62	42.000
ENSAPOG00000016035	smarca5	57	41.100	ENSAPOG00000007707	hells	79	40.523

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000016035	smarca5	98	84.026	ENSG00000102038	SMARCA1	92	83.709	Homo_sapiens
ENSAPOG00000016035	smarca5	98	83.153	ENSAMEG00000015218	SMARCA1	92	82.692	Ailuropoda_melanoleuca
ENSAPOG00000016035	smarca5	97	98.446	ENSACIG00000016982	smarca5	100	98.446	Amphilophus_citrinellus
ENSAPOG00000016035	smarca5	100	100.000	ENSAOCG00000015578	smarca5	100	100.000	Amphiprion_ocellaris
ENSAPOG00000016035	smarca5	100	100.000	ENSAPEG00000011117	smarca5	100	100.000	Amphiprion_percula
ENSAPOG00000016035	smarca5	100	98.069	ENSATEG00000012894	smarca5	100	98.069	Anabas_testudineus
ENSAPOG00000016035	smarca5	98	84.683	ENSAPLG00000013149	SMARCA1	99	84.426	Anas_platyrhynchos
ENSAPOG00000016035	smarca5	98	85.120	ENSACAG00000011376	SMARCA1	93	84.939	Anolis_carolinensis
ENSAPOG00000016035	smarca5	98	78.884	ENSANAG00000023098	SMARCA1	92	78.893	Aotus_nancymaae
ENSAPOG00000016035	smarca5	100	97.683	ENSACLG00000025356	smarca5	100	97.683	Astatotilapia_calliptera
ENSAPOG00000016035	smarca5	98	84.447	ENSAMXG00000011227	smarca1	99	85.645	Astyanax_mexicanus
ENSAPOG00000016035	smarca5	99	95.534	ENSAMXG00000005709	smarca5	97	93.855	Astyanax_mexicanus
ENSAPOG00000016035	smarca5	98	84.251	ENSBTAG00000002292	SMARCA1	90	83.667	Bos_taurus
ENSAPOG00000016035	smarca5	98	66.521	WBGene00002169	isw-1	95	64.087	Caenorhabditis_elegans
ENSAPOG00000016035	smarca5	98	84.026	ENSCJAG00000002868	SMARCA1	92	83.709	Callithrix_jacchus
ENSAPOG00000016035	smarca5	98	74.006	ENSCAFG00000018673	SMARCA1	99	75.410	Canis_familiaris
ENSAPOG00000016035	smarca5	98	84.245	ENSCAFG00020001751	SMARCA1	92	83.811	Canis_lupus_dingo
ENSAPOG00000016035	smarca5	98	83.917	ENSCHIG00000009837	SMARCA1	92	83.402	Capra_hircus
ENSAPOG00000016035	smarca5	98	84.354	ENSTSYG00000004240	SMARCA1	94	84.697	Carlito_syrichta
ENSAPOG00000016035	smarca5	98	83.479	ENSCPOG00000013601	SMARCA1	93	82.383	Cavia_porcellus
ENSAPOG00000016035	smarca5	98	81.291	ENSCCAG00000030817	SMARCA1	92	81.045	Cebus_capucinus
ENSAPOG00000016035	smarca5	96	85.281	ENSCATG00000015921	SMARCA1	90	84.952	Cercocebus_atys
ENSAPOG00000016035	smarca5	98	83.479	ENSCLAG00000002171	SMARCA1	92	82.992	Chinchilla_lanigera
ENSAPOG00000016035	smarca5	98	84.026	ENSCSAG00000008460	SMARCA1	92	83.709	Chlorocebus_sabaeus
ENSAPOG00000016035	smarca5	98	84.792	ENSCPBG00000001146	SMARCA1	92	84.734	Chrysemys_picta_bellii
ENSAPOG00000016035	smarca5	98	76.856	ENSCING00000004110	swi/snf	99	74.155	Ciona_intestinalis
ENSAPOG00000016035	smarca5	98	76.831	ENSCSAVG00000004620	-	99	76.286	Ciona_savignyi
ENSAPOG00000016035	smarca5	98	84.136	ENSCANG00000007183	SMARCA1	92	83.811	Colobus_angolensis_palliatus
ENSAPOG00000016035	smarca5	98	83.260	ENSCGRG00001010776	Smarca1	92	82.684	Cricetulus_griseus_chok1gshd
ENSAPOG00000016035	smarca5	96	84.270	ENSCGRG00000015301	Smarca1	94	83.227	Cricetulus_griseus_crigri
ENSAPOG00000016035	smarca5	100	97.394	ENSCSEG00000000328	smarca5	100	97.394	Cynoglossus_semilaevis
ENSAPOG00000016035	smarca5	100	96.815	ENSCVAG00000008668	smarca5	100	96.815	Cyprinodon_variegatus
ENSAPOG00000016035	smarca5	99	94.662	ENSDARG00000052348	smarca5	100	91.506	Danio_rerio
ENSAPOG00000016035	smarca5	98	82.869	ENSDARG00000012776	smarca1	96	82.915	Danio_rerio
ENSAPOG00000016035	smarca5	96	84.831	ENSDNOG00000004315	SMARCA1	90	84.632	Dasypus_novemcinctus
ENSAPOG00000016035	smarca5	96	85.073	ENSDORG00000009270	Smarca1	90	84.845	Dipodomys_ordii
ENSAPOG00000016035	smarca5	96	78.795	FBgn0011604	Iswi	97	74.400	Drosophila_melanogaster
ENSAPOG00000016035	smarca5	78	81.818	ENSETEG00000017426	SMARCA1	83	81.818	Echinops_telfairi
ENSAPOG00000016035	smarca5	98	83.278	ENSEBUG00000001239	smarca5	99	80.834	Eptatretus_burgeri
ENSAPOG00000016035	smarca5	96	80.931	ENSEASG00005008218	SMARCA1	99	79.735	Equus_asinus_asinus
ENSAPOG00000016035	smarca5	98	84.245	ENSECAG00000012106	SMARCA1	92	83.709	Equus_caballus
ENSAPOG00000016035	smarca5	79	86.531	ENSEEUG00000014927	SMARCA1	80	83.775	Erinaceus_europaeus
ENSAPOG00000016035	smarca5	98	84.556	ENSELUG00000010515	smarca1	95	85.377	Esox_lucius
ENSAPOG00000016035	smarca5	98	84.136	ENSFCAG00000018496	SMARCA1	92	83.709	Felis_catus
ENSAPOG00000016035	smarca5	92	85.981	ENSFALG00000000209	SMARCA1	98	85.339	Ficedula_albicollis
ENSAPOG00000016035	smarca5	96	83.592	ENSFDAG00000009818	SMARCA1	93	83.246	Fukomys_damarensis
ENSAPOG00000016035	smarca5	99	97.059	ENSFHEG00000007687	smarca5	100	94.365	Fundulus_heteroclitus
ENSAPOG00000016035	smarca5	96	85.666	ENSGALG00000008431	SMARCA1	94	85.340	Gallus_gallus
ENSAPOG00000016035	smarca5	100	97.297	ENSGAFG00000017731	smarca5	100	97.297	Gambusia_affinis
ENSAPOG00000016035	smarca5	98	84.792	ENSGAGG00000023575	SMARCA1	99	84.671	Gopherus_agassizii
ENSAPOG00000016035	smarca5	70	96.000	ENSGGOG00000012841	-	91	80.118	Gorilla_gorilla
ENSAPOG00000016035	smarca5	98	83.151	ENSHGLG00000003080	SMARCA1	92	82.787	Heterocephalus_glaber_female
ENSAPOG00000016035	smarca5	98	83.151	ENSHGLG00100001102	SMARCA1	98	82.281	Heterocephalus_glaber_male
ENSAPOG00000016035	smarca5	99	98.802	ENSHCOG00000005458	smarca5	100	97.782	Hippocampus_comes
ENSAPOG00000016035	smarca5	99	94.771	ENSIPUG00000005229	SMARCA5	96	95.277	Ictalurus_punctatus
ENSAPOG00000016035	smarca5	98	84.775	ENSIPUG00000016905	Smarca1	99	84.189	Ictalurus_punctatus
ENSAPOG00000016035	smarca5	98	83.807	ENSSTOG00000014524	SMARCA1	97	81.700	Ictidomys_tridecemlineatus
ENSAPOG00000016035	smarca5	98	83.151	ENSJJAG00000002593	Smarca1	92	82.263	Jaculus_jaculus
ENSAPOG00000016035	smarca5	100	97.104	ENSKMAG00000003777	smarca5	100	97.104	Kryptolebias_marmoratus
ENSAPOG00000016035	smarca5	94	96.626	ENSLBEG00000013295	SMARCA1	100	98.354	Labrus_bergylta
ENSAPOG00000016035	smarca5	100	96.718	ENSLBEG00000018112	smarca5	100	96.718	Labrus_bergylta
ENSAPOG00000016035	smarca5	98	85.573	ENSLACG00000016697	SMARCA1	95	85.258	Latimeria_chalumnae
ENSAPOG00000016035	smarca5	98	85.996	ENSLOCG00000014591	smarca1	95	85.949	Lepisosteus_oculatus
ENSAPOG00000016035	smarca5	99	82.935	ENSLAFG00000000896	SMARCA1	98	82.485	Loxodonta_africana
ENSAPOG00000016035	smarca5	98	84.026	ENSMFAG00000002117	SMARCA1	93	84.771	Macaca_fascicularis
ENSAPOG00000016035	smarca5	96	85.281	ENSMMUG00000008818	SMARCA1	97	84.829	Macaca_mulatta
ENSAPOG00000016035	smarca5	96	85.281	ENSMNEG00000041768	SMARCA1	93	84.771	Macaca_nemestrina
ENSAPOG00000016035	smarca5	98	84.026	ENSMLEG00000043198	SMARCA1	92	83.709	Mandrillus_leucophaeus
ENSAPOG00000016035	smarca5	100	97.979	ENSMAMG00000014294	smarca5	100	97.979	Mastacembelus_armatus
ENSAPOG00000016035	smarca5	100	97.683	ENSMZEG00005009369	smarca5	100	97.683	Maylandia_zebra
ENSAPOG00000016035	smarca5	98	83.477	ENSMGAG00000007042	SMARCA1	97	83.300	Meleagris_gallopavo
ENSAPOG00000016035	smarca5	96	84.382	ENSMAUG00000008133	Smarca1	90	83.121	Mesocricetus_auratus
ENSAPOG00000016035	smarca5	98	84.245	ENSMICG00000015768	SMARCA1	92	84.016	Microcebus_murinus
ENSAPOG00000016035	smarca5	99	82.628	ENSMOCG00000009464	Smarca1	92	81.957	Microtus_ochrogaster
ENSAPOG00000016035	smarca5	99	97.059	ENSMMOG00000005547	smarca5	100	97.384	Mola_mola
ENSAPOG00000016035	smarca5	98	84.447	ENSMODG00000013187	-	94	84.205	Monodelphis_domestica
ENSAPOG00000016035	smarca5	100	97.782	ENSMALG00000002081	smarca5	100	97.782	Monopterus_albus
ENSAPOG00000016035	smarca5	98	83.370	MGP_CAROLIEiJ_G0033034	Smarca1	92	82.263	Mus_caroli
ENSAPOG00000016035	smarca5	98	83.370	ENSMUSG00000031099	Smarca1	92	82.263	Mus_musculus
ENSAPOG00000016035	smarca5	98	83.682	MGP_PahariEiJ_G0031579	Smarca1	92	82.546	Mus_pahari
ENSAPOG00000016035	smarca5	98	83.370	MGP_SPRETEiJ_G0034192	Smarca1	92	82.263	Mus_spretus
ENSAPOG00000016035	smarca5	98	83.153	ENSMPUG00000017423	SMARCA1	87	82.794	Mustela_putorius_furo
ENSAPOG00000016035	smarca5	98	81.897	ENSMLUG00000029614	SMARCA1	92	81.212	Myotis_lucifugus
ENSAPOG00000016035	smarca5	96	84.719	ENSNGAG00000006492	Smarca1	90	83.652	Nannospalax_galili
ENSAPOG00000016035	smarca5	99	98.257	ENSNBRG00000004463	smarca5	99	98.390	Neolamprologus_brichardi
ENSAPOG00000016035	smarca5	96	84.494	ENSNLEG00000015179	SMARCA1	94	84.043	Nomascus_leucogenys
ENSAPOG00000016035	smarca5	92	76.009	ENSMEUG00000008819	SMARCA1	97	76.319	Notamacropus_eugenii
ENSAPOG00000016035	smarca5	96	83.260	ENSODEG00000012163	SMARCA1	90	83.246	Octodon_degus
ENSAPOG00000016035	smarca5	100	97.780	ENSONIG00000009993	smarca5	100	97.780	Oreochromis_niloticus
ENSAPOG00000016035	smarca5	98	85.120	ENSOANG00000002862	SMARCA1	99	84.979	Ornithorhynchus_anatinus
ENSAPOG00000016035	smarca5	99	83.696	ENSOCUG00000001047	SMARCA1	92	83.811	Oryctolagus_cuniculus
ENSAPOG00000016035	smarca5	100	96.923	ENSORLG00000021998	smarca5	100	96.923	Oryzias_latipes
ENSAPOG00000016035	smarca5	100	97.016	ENSORLG00020017679	smarca5	100	97.016	Oryzias_latipes_hni
ENSAPOG00000016035	smarca5	100	97.303	ENSORLG00015017210	smarca5	100	97.303	Oryzias_latipes_hsok
ENSAPOG00000016035	smarca5	100	97.300	ENSOMEG00000000086	smarca5	100	97.300	Oryzias_melastigma
ENSAPOG00000016035	smarca5	96	84.351	ENSOGAG00000004399	SMARCA1	90	84.089	Otolemur_garnettii
ENSAPOG00000016035	smarca5	98	83.917	ENSOARG00000014638	SMARCA1	99	83.402	Ovis_aries
ENSAPOG00000016035	smarca5	98	84.026	ENSPPAG00000034647	SMARCA1	92	83.709	Pan_paniscus
ENSAPOG00000016035	smarca5	98	84.245	ENSPPRG00000008929	SMARCA1	92	83.811	Panthera_pardus
ENSAPOG00000016035	smarca5	98	82.277	ENSPTIG00000000915	SMARCA1	96	81.974	Panthera_tigris_altaica
ENSAPOG00000016035	smarca5	98	84.026	ENSPTRG00000049876	SMARCA1	90	84.952	Pan_troglodytes
ENSAPOG00000016035	smarca5	98	84.026	ENSPANG00000003871	SMARCA1	92	83.709	Papio_anubis
ENSAPOG00000016035	smarca5	96	84.040	ENSPKIG00000013411	smarca1	96	83.912	Paramormyrops_kingsleyae
ENSAPOG00000016035	smarca5	98	84.792	ENSPSIG00000010101	SMARCA1	99	84.671	Pelodiscus_sinensis
ENSAPOG00000016035	smarca5	96	84.494	ENSPEMG00000017503	Smarca1	90	83.439	Peromyscus_maniculatus_bairdii
ENSAPOG00000016035	smarca5	98	84.902	ENSPCIG00000015460	SMARCA1	96	84.631	Phascolarctos_cinereus
ENSAPOG00000016035	smarca5	100	97.394	ENSPFOG00000007649	smarca5	100	97.394	Poecilia_formosa
ENSAPOG00000016035	smarca5	100	97.394	ENSPLAG00000003363	smarca5	100	97.394	Poecilia_latipinna
ENSAPOG00000016035	smarca5	100	97.490	ENSPMEG00000019849	smarca5	100	97.490	Poecilia_mexicana
ENSAPOG00000016035	smarca5	100	97.394	ENSPREG00000023250	smarca5	100	97.394	Poecilia_reticulata
ENSAPOG00000016035	smarca5	98	80.963	ENSPPYG00000020703	SMARCA1	92	80.840	Pongo_abelii
ENSAPOG00000016035	smarca5	77	78.125	ENSPCOG00000020722	SMARCA1	93	80.415	Propithecus_coquereli
ENSAPOG00000016035	smarca5	89	83.484	ENSPVAG00000003805	SMARCA1	84	83.574	Pteropus_vampyrus
ENSAPOG00000016035	smarca5	58	98.417	ENSPNYG00000012299	smarca5	92	98.417	Pundamilia_nyererei
ENSAPOG00000016035	smarca5	98	83.151	ENSRNOG00000003762	Smarca1	92	82.480	Rattus_norvegicus
ENSAPOG00000016035	smarca5	98	84.136	ENSRROG00000034167	SMARCA1	92	83.811	Rhinopithecus_roxellana
ENSAPOG00000016035	smarca5	98	84.026	ENSSBOG00000020641	SMARCA1	99	83.607	Saimiri_boliviensis_boliviensis
ENSAPOG00000016035	smarca5	98	80.635	ENSSHAG00000013518	SMARCA1	99	79.733	Sarcophilus_harrisii
ENSAPOG00000016035	smarca5	98	85.214	ENSSFOG00015009043	smarca1	95	85.010	Scleropages_formosus
ENSAPOG00000016035	smarca5	99	93.573	ENSSFOG00015016794	smarca5	100	93.814	Scleropages_formosus
ENSAPOG00000016035	smarca5	100	96.724	ENSSMAG00000004801	smarca5	100	96.724	Scophthalmus_maximus
ENSAPOG00000016035	smarca5	100	97.973	ENSSDUG00000020690	smarca5	100	97.973	Seriola_dumerili
ENSAPOG00000016035	smarca5	100	97.973	ENSSLDG00000025190	smarca5	100	97.973	Seriola_lalandi_dorsalis
ENSAPOG00000016035	smarca5	88	83.986	ENSSARG00000000842	SMARCA1	81	83.986	Sorex_araneus
ENSAPOG00000016035	smarca5	96	85.650	ENSSPUG00000000590	SMARCA1	92	85.445	Sphenodon_punctatus
ENSAPOG00000016035	smarca5	100	99.421	ENSSPAG00000002894	smarca5	100	99.421	Stegastes_partitus
ENSAPOG00000016035	smarca5	98	84.026	ENSSSCG00000012649	SMARCA1	95	83.214	Sus_scrofa
ENSAPOG00000016035	smarca5	98	84.573	ENSTGUG00000003899	-	99	84.119	Taeniopygia_guttata
ENSAPOG00000016035	smarca5	100	96.622	ENSTRUG00000014094	smarca5	100	96.139	Takifugu_rubripes
ENSAPOG00000016035	smarca5	98	98.357	ENSTNIG00000017717	smarca5	97	95.870	Tetraodon_nigroviridis
ENSAPOG00000016035	smarca5	96	82.594	ENSTBEG00000014973	SMARCA1	89	82.638	Tupaia_belangeri
ENSAPOG00000016035	smarca5	96	80.820	ENSTTRG00000006168	SMARCA1	96	80.400	Tursiops_truncatus
ENSAPOG00000016035	smarca5	98	84.026	ENSUAMG00000020201	SMARCA1	92	83.504	Ursus_americanus
ENSAPOG00000016035	smarca5	98	80.197	ENSUMAG00000004073	SMARCA1	95	85.360	Ursus_maritimus
ENSAPOG00000016035	smarca5	76	86.842	ENSVPAG00000010492	-	77	87.197	Vicugna_pacos
ENSAPOG00000016035	smarca5	98	84.245	ENSVVUG00000008878	SMARCA1	98	85.059	Vulpes_vulpes
ENSAPOG00000016035	smarca5	98	84.725	ENSXETG00000001526	smarca1	97	84.671	Xenopus_tropicalis
ENSAPOG00000016035	smarca5	99	97.712	ENSXCOG00000011170	smarca5	100	97.423	Xiphophorus_couchianus
ENSAPOG00000016035	smarca5	100	97.201	ENSXMAG00000009678	smarca5	100	97.201	Xiphophorus_maculatus