EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000016051 (Gene tree)
Gene ID: 110953784
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 4499 bases
Position: chrMVNR01000311.1:316729-321227
Accession: 110953784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000029882	zf-C2H2	PF00096.26	7.1e-11	1	2
ENSAPOP00000029882	zf-C2H2	PF00096.26	7.1e-11	2	2
ENSAPOP00000029882	zf-met	PF12874.7	9.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000032333	-	2683	XM_022197949	ENSAPOP00000029882	384 (aa)	XP_022053641	UPI000B8F00BD

Gene Model

Click here to download ENSAPOG00000016051's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000016051's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000016051	prdm12b	66	41.176	ENSAPOG00000023220	prdm5	93	42.105
ENSAPOG00000016051	prdm12b	100	67.708	ENSAPOG00000018234	-	100	67.708

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000016051	prdm12b	90	80.290	ENSG00000130711	PRDM12	99	73.643	Homo_sapiens
ENSAPOG00000016051	prdm12b	90	79.070	ENSAMEG00000016234	PRDM12	99	79.070	Ailuropoda_melanoleuca
ENSAPOG00000016051	prdm12b	100	94.531	ENSACIG00000019578	prdm12b	100	94.531	Amphilophus_citrinellus
ENSAPOG00000016051	prdm12b	100	78.987	ENSACIG00000005193	-	100	79.241	Amphilophus_citrinellus
ENSAPOG00000016051	prdm12b	100	97.135	ENSAOCG00000015040	prdm12b	100	97.135	Amphiprion_ocellaris
ENSAPOG00000016051	prdm12b	100	72.319	ENSAPEG00000022849	-	99	72.070	Amphiprion_percula
ENSAPOG00000016051	prdm12b	100	96.615	ENSAPEG00000015092	prdm12b	100	96.615	Amphiprion_percula
ENSAPOG00000016051	prdm12b	100	82.821	ENSATEG00000014595	-	100	83.077	Anabas_testudineus
ENSAPOG00000016051	prdm12b	94	77.778	ENSANAG00000020616	PRDM12	97	79.202	Aotus_nancymaae
ENSAPOG00000016051	prdm12b	100	77.037	ENSACLG00000007631	-	100	77.531	Astatotilapia_calliptera
ENSAPOG00000016051	prdm12b	100	88.021	ENSACLG00000011876	prdm12b	100	87.240	Astatotilapia_calliptera
ENSAPOG00000016051	prdm12b	100	81.095	ENSAMXG00000008540	PRDM12	100	81.095	Astyanax_mexicanus
ENSAPOG00000016051	prdm12b	100	82.338	ENSAMXG00000033665	prdm12b	100	82.597	Astyanax_mexicanus
ENSAPOG00000016051	prdm12b	90	80.870	ENSBTAG00000023797	PRDM12	99	75.260	Bos_taurus
ENSAPOG00000016051	prdm12b	90	80.290	ENSCJAG00000020540	PRDM12	99	74.740	Callithrix_jacchus
ENSAPOG00000016051	prdm12b	81	78.526	ENSCAFG00000023076	PRDM12	99	74.269	Canis_familiaris
ENSAPOG00000016051	prdm12b	90	80.580	ENSCAFG00020024046	PRDM12	99	75.000	Canis_lupus_dingo
ENSAPOG00000016051	prdm12b	90	80.580	ENSCHIG00000025005	PRDM12	99	75.000	Capra_hircus
ENSAPOG00000016051	prdm12b	87	79.580	ENSCPOG00000005901	PRDM12	95	79.580	Cavia_porcellus
ENSAPOG00000016051	prdm12b	90	80.290	ENSCCAG00000037485	PRDM12	99	74.740	Cebus_capucinus
ENSAPOG00000016051	prdm12b	90	80.290	ENSCATG00000020327	PRDM12	99	74.740	Cercocebus_atys
ENSAPOG00000016051	prdm12b	90	80.290	ENSCLAG00000005499	PRDM12	90	78.917	Chinchilla_lanigera
ENSAPOG00000016051	prdm12b	90	80.290	ENSCSAG00000014756	PRDM12	99	74.740	Chlorocebus_sabaeus
ENSAPOG00000016051	prdm12b	100	76.562	ENSCPBG00000022628	PRDM12	99	76.302	Chrysemys_picta_bellii
ENSAPOG00000016051	prdm12b	90	80.870	ENSCGRG00001015005	Prdm12	99	75.130	Cricetulus_griseus_chok1gshd
ENSAPOG00000016051	prdm12b	100	80.612	ENSCVAG00000000944	-	100	80.612	Cyprinodon_variegatus
ENSAPOG00000016051	prdm12b	100	90.104	ENSCVAG00000017166	prdm12b	100	89.062	Cyprinodon_variegatus
ENSAPOG00000016051	prdm12b	100	82.031	ENSDARG00000007430	prdm12b	100	80.729	Danio_rerio
ENSAPOG00000016051	prdm12b	90	80.347	ENSDNOG00000042302	PRDM12	99	75.065	Dasypus_novemcinctus
ENSAPOG00000016051	prdm12b	84	66.967	ENSEBUG00000016780	prdm12b	80	64.365	Eptatretus_burgeri
ENSAPOG00000016051	prdm12b	94	78.056	ENSEASG00005008472	PRDM12	99	75.000	Equus_asinus_asinus
ENSAPOG00000016051	prdm12b	94	78.056	ENSECAG00000005933	PRDM12	99	75.000	Equus_caballus
ENSAPOG00000016051	prdm12b	100	81.510	ENSELUG00000009905	prdm12b	100	81.250	Esox_lucius
ENSAPOG00000016051	prdm12b	100	83.377	ENSELUG00000013674	PRDM12	100	83.333	Esox_lucius
ENSAPOG00000016051	prdm12b	90	80.580	ENSFCAG00000043086	PRDM12	99	75.000	Felis_catus
ENSAPOG00000016051	prdm12b	100	76.823	ENSFALG00000001445	PRDM12	89	76.302	Ficedula_albicollis
ENSAPOG00000016051	prdm12b	100	90.130	ENSFHEG00000003944	prdm12b	100	89.091	Fundulus_heteroclitus
ENSAPOG00000016051	prdm12b	100	75.556	ENSFHEG00000007746	-	100	75.556	Fundulus_heteroclitus
ENSAPOG00000016051	prdm12b	100	83.548	ENSGMOG00000011797	prdm12b	100	82.474	Gadus_morhua
ENSAPOG00000016051	prdm12b	100	76.823	ENSGALG00000003895	PRDM12	99	76.302	Gallus_gallus
ENSAPOG00000016051	prdm12b	100	87.887	ENSGAFG00000010827	prdm12b	99	88.402	Gambusia_affinis
ENSAPOG00000016051	prdm12b	100	88.083	ENSGACG00000016713	prdm12b	99	87.047	Gasterosteus_aculeatus
ENSAPOG00000016051	prdm12b	100	76.562	ENSGAGG00000014083	PRDM12	99	76.302	Gopherus_agassizii
ENSAPOG00000016051	prdm12b	92	78.531	ENSGGOG00000010568	PRDM12	99	74.352	Gorilla_gorilla
ENSAPOG00000016051	prdm12b	100	91.406	ENSHBUG00000022878	prdm12b	100	90.885	Haplochromis_burtoni
ENSAPOG00000016051	prdm12b	100	77.037	ENSHBUG00000022537	-	93	77.531	Haplochromis_burtoni
ENSAPOG00000016051	prdm12b	90	80.290	ENSHGLG00000013939	PRDM12	99	74.026	Heterocephalus_glaber_female
ENSAPOG00000016051	prdm12b	100	71.208	ENSHCOG00000021167	-	100	69.666	Hippocampus_comes
ENSAPOG00000016051	prdm12b	90	87.429	ENSHCOG00000003663	prdm12b	100	80.750	Hippocampus_comes
ENSAPOG00000016051	prdm12b	100	83.854	ENSIPUG00000017053	prdm12b	100	83.594	Ictalurus_punctatus
ENSAPOG00000016051	prdm12b	100	76.823	ENSIPUG00000019544	PRDM12	100	77.083	Ictalurus_punctatus
ENSAPOG00000016051	prdm12b	94	77.839	ENSSTOG00000005986	PRDM12	86	79.202	Ictidomys_tridecemlineatus
ENSAPOG00000016051	prdm12b	91	80.172	ENSJJAG00000005424	Prdm12	98	80.580	Jaculus_jaculus
ENSAPOG00000016051	prdm12b	94	76.923	ENSKMAG00000021205	-	94	76.087	Kryptolebias_marmoratus
ENSAPOG00000016051	prdm12b	100	83.990	ENSKMAG00000016921	prdm12b	100	84.729	Kryptolebias_marmoratus
ENSAPOG00000016051	prdm12b	100	88.946	ENSLBEG00000017769	prdm12b	100	88.946	Labrus_bergylta
ENSAPOG00000016051	prdm12b	100	80.256	ENSLBEG00000007776	-	100	80.000	Labrus_bergylta
ENSAPOG00000016051	prdm12b	100	78.385	ENSLACG00000017560	PRDM12	99	77.344	Latimeria_chalumnae
ENSAPOG00000016051	prdm12b	100	83.594	ENSLOCG00000005429	prdm12b	100	84.115	Lepisosteus_oculatus
ENSAPOG00000016051	prdm12b	90	79.143	ENSLAFG00000006979	PRDM12	90	77.809	Loxodonta_africana
ENSAPOG00000016051	prdm12b	100	73.643	ENSMFAG00000040322	PRDM12	99	74.160	Macaca_fascicularis
ENSAPOG00000016051	prdm12b	90	80.290	ENSMNEG00000037234	PRDM12	99	74.740	Macaca_nemestrina
ENSAPOG00000016051	prdm12b	100	93.523	ENSMAMG00000013212	prdm12b	100	93.523	Mastacembelus_armatus
ENSAPOG00000016051	prdm12b	100	73.529	ENSMAMG00000018988	-	100	74.020	Mastacembelus_armatus
ENSAPOG00000016051	prdm12b	100	76.658	ENSMZEG00005000415	PRDM12	100	76.904	Maylandia_zebra
ENSAPOG00000016051	prdm12b	94	79.006	ENSMGAG00000005438	PRDM12	91	81.449	Meleagris_gallopavo
ENSAPOG00000016051	prdm12b	100	75.065	ENSMAUG00000013040	Prdm12	99	74.805	Mesocricetus_auratus
ENSAPOG00000016051	prdm12b	93	78.212	ENSMICG00000015480	PRDM12	99	74.740	Microcebus_murinus
ENSAPOG00000016051	prdm12b	99	75.526	ENSMOCG00000021026	Prdm12	90	79.772	Microtus_ochrogaster
ENSAPOG00000016051	prdm12b	100	76.302	ENSMODG00000012108	PRDM12	99	75.844	Monodelphis_domestica
ENSAPOG00000016051	prdm12b	100	75.389	ENSMALG00000021901	prdm12b	99	74.611	Monopterus_albus
ENSAPOG00000016051	prdm12b	92	79.096	MGP_CAROLIEiJ_G0023414	Prdm12	99	75.065	Mus_caroli
ENSAPOG00000016051	prdm12b	92	79.096	ENSMUSG00000079466	Prdm12	99	75.065	Mus_musculus
ENSAPOG00000016051	prdm12b	92	79.096	MGP_PahariEiJ_G0024871	Prdm12	99	75.065	Mus_pahari
ENSAPOG00000016051	prdm12b	92	79.096	MGP_SPRETEiJ_G0024331	Prdm12	99	75.065	Mus_spretus
ENSAPOG00000016051	prdm12b	90	80.580	ENSNGAG00000018480	Prdm12	99	74.219	Nannospalax_galili
ENSAPOG00000016051	prdm12b	100	93.750	ENSNBRG00000006727	prdm12b	100	93.750	Neolamprologus_brichardi
ENSAPOG00000016051	prdm12b	100	71.429	ENSNBRG00000024312	-	100	70.918	Neolamprologus_brichardi
ENSAPOG00000016051	prdm12b	100	68.490	ENSMEUG00000003828	PRDM12	99	68.052	Notamacropus_eugenii
ENSAPOG00000016051	prdm12b	90	80.580	ENSOPRG00000008680	PRDM12	98	80.580	Ochotona_princeps
ENSAPOG00000016051	prdm12b	94	77.778	ENSODEG00000016282	PRDM12	62	78.917	Octodon_degus
ENSAPOG00000016051	prdm12b	64	73.171	ENSOANG00000001043	PRDM12	100	72.764	Ornithorhynchus_anatinus
ENSAPOG00000016051	prdm12b	88	76.696	ENSOCUG00000008241	PRDM12	96	79.688	Oryctolagus_cuniculus
ENSAPOG00000016051	prdm12b	100	89.351	ENSORLG00000007114	prdm12b	99	88.802	Oryzias_latipes
ENSAPOG00000016051	prdm12b	100	79.093	ENSORLG00000017558	-	100	78.841	Oryzias_latipes
ENSAPOG00000016051	prdm12b	100	79.597	ENSORLG00020013167	-	100	79.597	Oryzias_latipes_hni
ENSAPOG00000016051	prdm12b	100	89.583	ENSORLG00020019565	prdm12b	99	89.583	Oryzias_latipes_hni
ENSAPOG00000016051	prdm12b	100	89.323	ENSORLG00015007621	prdm12b	99	89.062	Oryzias_latipes_hsok
ENSAPOG00000016051	prdm12b	100	79.093	ENSORLG00015003435	-	100	78.841	Oryzias_latipes_hsok
ENSAPOG00000016051	prdm12b	100	90.390	ENSOMEG00000004134	prdm12b	99	89.844	Oryzias_melastigma
ENSAPOG00000016051	prdm12b	100	78.827	ENSOMEG00000007762	-	100	79.082	Oryzias_melastigma
ENSAPOG00000016051	prdm12b	90	80.580	ENSOGAG00000007557	PRDM12	97	80.580	Otolemur_garnettii
ENSAPOG00000016051	prdm12b	80	78.176	ENSPPAG00000031506	-	99	76.997	Pan_paniscus
ENSAPOG00000016051	prdm12b	98	69.761	ENSPPRG00000023024	PRDM12	91	69.761	Panthera_pardus
ENSAPOG00000016051	prdm12b	90	80.290	ENSPTRG00000043324	-	99	74.611	Pan_troglodytes
ENSAPOG00000016051	prdm12b	90	80.290	ENSPTRG00000021475	PRDM12	99	74.611	Pan_troglodytes
ENSAPOG00000016051	prdm12b	90	80.290	ENSPANG00000025967	PRDM12	99	74.740	Papio_anubis
ENSAPOG00000016051	prdm12b	100	82.812	ENSPKIG00000007228	prdm12b	100	83.594	Paramormyrops_kingsleyae
ENSAPOG00000016051	prdm12b	95	77.686	ENSPKIG00000004305	PRDM12	94	77.971	Paramormyrops_kingsleyae
ENSAPOG00000016051	prdm12b	100	76.823	ENSPSIG00000006739	PRDM12	99	76.562	Pelodiscus_sinensis
ENSAPOG00000016051	prdm12b	100	73.632	ENSPMGG00000002356	-	100	73.134	Periophthalmus_magnuspinnatus
ENSAPOG00000016051	prdm12b	100	88.281	ENSPMGG00000008867	prdm12b	99	88.542	Periophthalmus_magnuspinnatus
ENSAPOG00000016051	prdm12b	96	76.190	ENSPEMG00000009969	Prdm12	91	79.487	Peromyscus_maniculatus_bairdii
ENSAPOG00000016051	prdm12b	100	76.302	ENSPCIG00000024119	PRDM12	99	75.844	Phascolarctos_cinereus
ENSAPOG00000016051	prdm12b	100	88.601	ENSPFOG00000019841	prdm12b	100	88.342	Poecilia_formosa
ENSAPOG00000016051	prdm12b	100	87.212	ENSPLAG00000016626	prdm12b	99	87.724	Poecilia_latipinna
ENSAPOG00000016051	prdm12b	96	87.268	ENSPMEG00000016698	prdm12b	99	87.798	Poecilia_mexicana
ENSAPOG00000016051	prdm12b	100	86.990	ENSPREG00000015073	prdm12b	99	87.500	Poecilia_reticulata
ENSAPOG00000016051	prdm12b	95	72.995	ENSPREG00000003211	-	94	72.193	Poecilia_reticulata
ENSAPOG00000016051	prdm12b	94	78.333	ENSPPYG00000019694	PRDM12	92	80.580	Pongo_abelii
ENSAPOG00000016051	prdm12b	90	80.580	ENSPCOG00000022255	PRDM12	99	75.130	Propithecus_coquereli
ENSAPOG00000016051	prdm12b	90	80.580	ENSPVAG00000001511	PRDM12	99	74.870	Pteropus_vampyrus
ENSAPOG00000016051	prdm12b	100	91.667	ENSPNYG00000009607	prdm12b	100	90.885	Pundamilia_nyererei
ENSAPOG00000016051	prdm12b	100	76.658	ENSPNYG00000013589	-	100	76.904	Pundamilia_nyererei
ENSAPOG00000016051	prdm12b	100	82.552	ENSPNAG00000024532	prdm12b	100	82.292	Pygocentrus_nattereri
ENSAPOG00000016051	prdm12b	100	78.718	ENSPNAG00000013396	PRDM12	100	78.718	Pygocentrus_nattereri
ENSAPOG00000016051	prdm12b	92	79.096	ENSRNOG00000009218	Prdm12	99	75.065	Rattus_norvegicus
ENSAPOG00000016051	prdm12b	88	80.415	ENSRBIG00000042712	PRDM12	88	79.765	Rhinopithecus_bieti
ENSAPOG00000016051	prdm12b	89	80.645	ENSRROG00000043554	PRDM12	99	80.645	Rhinopithecus_roxellana
ENSAPOG00000016051	prdm12b	100	76.104	ENSSHAG00000015972	PRDM12	99	75.648	Sarcophilus_harrisii
ENSAPOG00000016051	prdm12b	100	89.203	ENSSMAG00000003754	prdm12b	100	88.520	Scophthalmus_maximus
ENSAPOG00000016051	prdm12b	100	82.564	ENSSDUG00000019071	-	100	82.519	Seriola_dumerili
ENSAPOG00000016051	prdm12b	100	93.798	ENSSDUG00000023498	prdm12b	100	93.798	Seriola_dumerili
ENSAPOG00000016051	prdm12b	100	76.425	ENSSLDG00000013562	-	100	76.166	Seriola_lalandi_dorsalis
ENSAPOG00000016051	prdm12b	100	93.282	ENSSLDG00000009557	prdm12b	100	92.248	Seriola_lalandi_dorsalis
ENSAPOG00000016051	prdm12b	100	76.823	ENSSPUG00000013424	PRDM12	99	76.302	Sphenodon_punctatus
ENSAPOG00000016051	prdm12b	100	73.028	ENSSPAG00000022420	-	100	72.519	Stegastes_partitus
ENSAPOG00000016051	prdm12b	100	94.010	ENSSPAG00000018824	prdm12b	100	94.010	Stegastes_partitus
ENSAPOG00000016051	prdm12b	90	80.580	ENSSSCG00000005703	PRDM12	99	75.000	Sus_scrofa
ENSAPOG00000016051	prdm12b	100	77.403	ENSTRUG00000013239	-	100	77.403	Takifugu_rubripes
ENSAPOG00000016051	prdm12b	100	87.824	ENSTRUG00000018659	prdm12b	100	86.528	Takifugu_rubripes
ENSAPOG00000016051	prdm12b	100	74.419	ENSTNIG00000005859	-	99	73.643	Tetraodon_nigroviridis
ENSAPOG00000016051	prdm12b	100	86.528	ENSTNIG00000009020	prdm12b	99	85.233	Tetraodon_nigroviridis
ENSAPOG00000016051	prdm12b	90	80.580	ENSUAMG00000009653	PRDM12	90	80.580	Ursus_americanus
ENSAPOG00000016051	prdm12b	90	80.580	ENSVVUG00000027662	PRDM12	79	79.202	Vulpes_vulpes
ENSAPOG00000016051	prdm12b	100	88.601	ENSXCOG00000002836	prdm12b	99	88.860	Xiphophorus_couchianus
ENSAPOG00000016051	prdm12b	100	89.378	ENSXMAG00000005537	prdm12b	100	89.637	Xiphophorus_maculatus
ENSAPOG00000016051	prdm12b	100	78.218	ENSXMAG00000028012	-	100	76.980	Xiphophorus_maculatus