EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000016304 (Gene tree)
Gene ID: 110954930
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 14394 bases
Position: chrMVNR01000379.1:58076-72469
Accession: 110954930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000013474	Fox-1_C	PF12414.8	2.4e-34	1	1
ENSAPOP00000029983	Fox-1_C	PF12414.8	3.1e-14	1	1
ENSAPOP00000029983	RRM_1	PF00076.22	8.4e-18	1	1
ENSAPOP00000013474	RRM_1	PF00076.22	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000021624	-	1068	-	ENSAPOP00000029983	355 (aa)	-	-
ENSAPOT00000021653	-	1240	XM_022199699	ENSAPOP00000013474	378 (aa)	XP_022055391	UPI000B8F29A5

Gene Model

Click here to download ENSAPOG00000016304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000016304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000016304	rbfox1l	63	63.424	ENSAPOG00000004877	rbfox2	53	64.082
ENSAPOG00000016304	rbfox1l	62	59.302	ENSAPOG00000021561	-	61	63.137
ENSAPOG00000016304	rbfox1l	98	54.400	ENSAPOG00000021630	rbfox3b	59	74.779
ENSAPOG00000016304	rbfox1l	61	69.099	ENSAPOG00000003197	rbfox1	56	70.354
ENSAPOG00000016304	rbfox1l	73	55.396	ENSAPOG00000015658	-	62	62.281

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000016304	rbfox1l	97	84.527	ENSACIG00000006441	rbfox1l	97	83.668	Amphilophus_citrinellus
ENSAPOG00000016304	rbfox1l	86	93.827	ENSAOCG00000020938	rbfox1l	96	93.827	Amphiprion_ocellaris
ENSAPOG00000016304	rbfox1l	98	98.374	ENSAPEG00000008232	rbfox1l	97	98.374	Amphiprion_percula
ENSAPOG00000016304	rbfox1l	98	86.792	ENSATEG00000022649	rbfox1l	97	85.984	Anabas_testudineus
ENSAPOG00000016304	rbfox1l	62	71.369	ENSACAG00000011931	-	83	73.932	Anolis_carolinensis
ENSAPOG00000016304	rbfox1l	98	87.601	ENSACLG00000021394	rbfox1l	97	89.218	Astatotilapia_calliptera
ENSAPOG00000016304	rbfox1l	98	87.166	ENSAMXG00000010470	rbfox1l	97	85.294	Astyanax_mexicanus
ENSAPOG00000016304	rbfox1l	98	54.286	ENSCPBG00000010944	-	97	55.641	Chrysemys_picta_bellii
ENSAPOG00000016304	rbfox1l	98	87.903	ENSCSEG00000018898	rbfox1l	97	87.634	Cynoglossus_semilaevis
ENSAPOG00000016304	rbfox1l	98	89.973	ENSCVAG00000007986	rbfox1l	97	89.973	Cyprinodon_variegatus
ENSAPOG00000016304	rbfox1l	98	83.155	ENSDARG00000021184	rbfox1l	97	82.086	Danio_rerio
ENSAPOG00000016304	rbfox1l	98	79.528	ENSELUG00000015077	rbfox1l	97	82.415	Esox_lucius
ENSAPOG00000016304	rbfox1l	97	72.414	ENSFHEG00000016557	rbfox1l	91	89.655	Fundulus_heteroclitus
ENSAPOG00000016304	rbfox1l	98	83.288	ENSGMOG00000005040	rbfox1l	97	82.480	Gadus_morhua
ENSAPOG00000016304	rbfox1l	90	88.596	ENSGAFG00000013211	rbfox1l	94	88.596	Gambusia_affinis
ENSAPOG00000016304	rbfox1l	98	88.410	ENSGACG00000010757	rbfox1l	97	88.949	Gasterosteus_aculeatus
ENSAPOG00000016304	rbfox1l	71	63.177	ENSGAGG00000012440	-	79	72.294	Gopherus_agassizii
ENSAPOG00000016304	rbfox1l	98	87.601	ENSHBUG00000013406	rbfox1l	97	89.218	Haplochromis_burtoni
ENSAPOG00000016304	rbfox1l	98	83.602	ENSHCOG00000020771	rbfox1l	97	85.215	Hippocampus_comes
ENSAPOG00000016304	rbfox1l	100	81.201	ENSIPUG00000000065	rbfox1l	96	81.159	Ictalurus_punctatus
ENSAPOG00000016304	rbfox1l	98	89.008	ENSKMAG00000005146	rbfox1l	97	88.472	Kryptolebias_marmoratus
ENSAPOG00000016304	rbfox1l	98	90.566	ENSLBEG00000017089	rbfox1l	97	91.105	Labrus_bergylta
ENSAPOG00000016304	rbfox1l	98	89.757	ENSMAMG00000019480	rbfox1l	97	89.757	Mastacembelus_armatus
ENSAPOG00000016304	rbfox1l	98	87.601	ENSMZEG00005016374	rbfox1l	97	89.218	Maylandia_zebra
ENSAPOG00000016304	rbfox1l	98	88.410	ENSMMOG00000016530	rbfox1l	97	87.332	Mola_mola
ENSAPOG00000016304	rbfox1l	98	85.714	ENSMALG00000009384	rbfox1l	97	85.984	Monopterus_albus
ENSAPOG00000016304	rbfox1l	98	88.949	ENSNBRG00000003346	rbfox1l	97	88.140	Neolamprologus_brichardi
ENSAPOG00000016304	rbfox1l	98	88.140	ENSONIG00000012754	rbfox1l	97	89.757	Oreochromis_niloticus
ENSAPOG00000016304	rbfox1l	98	88.889	ENSORLG00000011269	rbfox1l	97	88.889	Oryzias_latipes
ENSAPOG00000016304	rbfox1l	98	89.702	ENSORLG00020000162	rbfox1l	97	89.702	Oryzias_latipes_hni
ENSAPOG00000016304	rbfox1l	98	89.702	ENSORLG00015013464	rbfox1l	97	89.702	Oryzias_latipes_hsok
ENSAPOG00000016304	rbfox1l	98	91.328	ENSOMEG00000010584	rbfox1l	97	91.328	Oryzias_melastigma
ENSAPOG00000016304	rbfox1l	98	85.484	ENSPKIG00000012029	rbfox1l	97	84.677	Paramormyrops_kingsleyae
ENSAPOG00000016304	rbfox1l	98	83.243	ENSPMGG00000012082	rbfox1l	97	82.703	Periophthalmus_magnuspinnatus
ENSAPOG00000016304	rbfox1l	98	90.027	ENSPFOG00000009338	rbfox1l	97	89.757	Poecilia_formosa
ENSAPOG00000016304	rbfox1l	86	82.263	ENSPLAG00000012816	rbfox1l	99	81.957	Poecilia_latipinna
ENSAPOG00000016304	rbfox1l	98	85.714	ENSPMEG00000017597	rbfox1l	97	84.906	Poecilia_mexicana
ENSAPOG00000016304	rbfox1l	98	85.714	ENSPREG00000007940	rbfox1l	97	84.906	Poecilia_reticulata
ENSAPOG00000016304	rbfox1l	98	87.332	ENSPNYG00000002098	rbfox1l	97	88.949	Pundamilia_nyererei
ENSAPOG00000016304	rbfox1l	98	86.133	ENSPNAG00000001620	rbfox1l	97	84.267	Pygocentrus_nattereri
ENSAPOG00000016304	rbfox1l	98	80.965	ENSSFOG00015000675	rbfox1l	97	82.306	Scleropages_formosus
ENSAPOG00000016304	rbfox1l	98	88.410	ENSSMAG00000013090	rbfox1l	97	88.949	Scophthalmus_maximus
ENSAPOG00000016304	rbfox1l	98	85.942	ENSSDUG00000008705	rbfox1l	97	87.268	Seriola_dumerili
ENSAPOG00000016304	rbfox1l	98	88.830	ENSSLDG00000022256	rbfox1l	97	87.766	Seriola_lalandi_dorsalis
ENSAPOG00000016304	rbfox1l	98	95.664	ENSSPAG00000016620	rbfox1l	97	95.664	Stegastes_partitus
ENSAPOG00000016304	rbfox1l	97	86.216	ENSTRUG00000015905	rbfox1l	100	85.405	Takifugu_rubripes
ENSAPOG00000016304	rbfox1l	62	80.859	ENSTNIG00000008088	rbfox1l	92	84.677	Tetraodon_nigroviridis
ENSAPOG00000016304	rbfox1l	98	90.027	ENSXMAG00000023471	rbfox1l	97	89.757	Xiphophorus_maculatus