EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPOG00000016425 (Gene tree)
Gene ID
110967964
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Acanthochromis_polyacanthus
Status
putative
Strand
Plus strand
Length
11999 bases
Position
chrMVNR01001950.1:45943-57941
Accession
110967964
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPOP00000013625RRM_1PF00076.222.4e-1711
ENSAPOP00000030094RRM_1PF00076.223.7e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPOT00000021837-1081XM_022217740ENSAPOP00000013625232 (aa)XP_022073432UPI000B8F12A7
ENSAPOT00000021827-1237XM_022217739ENSAPOP00000030094284 (aa)XP_022073431UPI000B905E62
Gene Model
Click here to download ENSAPOG00000016425's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000016425's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPOG00000016425pabpn17854.497ENSAPOG00000000685PABPN1L6253.695
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPOG00000016425pabpn19972.103ENSG00000258643BCL2L2-PABPN17072.103Homo_sapiens
ENSAPOG00000016425pabpn18682.039ENSG00000100836PABPN19481.548Homo_sapiens
ENSAPOG00000016425pabpn18183.684ENSAMEG00000007048BCL2L2-PABPN110083.684Ailuropoda_melanoleuca
ENSAPOG00000016425pabpn110097.203ENSACIG00000021744pabpn110098.295Amphilophus_citrinellus
ENSAPOG00000016425pabpn1100100.000ENSAOCG00000015805pabpn1100100.000Amphiprion_ocellaris
ENSAPOG00000016425pabpn1100100.000ENSAPEG00000009623pabpn1100100.000Amphiprion_percula
ENSAPOG00000016425pabpn110099.569ENSATEG00000020531pabpn110099.569Anabas_testudineus
ENSAPOG00000016425pabpn18185.263ENSACAG00000006185-8172.500Anolis_carolinensis
ENSAPOG00000016425pabpn18483.333ENSANAG00000024513-8475.620Aotus_nancymaae
ENSAPOG00000016425pabpn110096.864ENSACLG00000016374pabpn110096.864Astatotilapia_calliptera
ENSAPOG00000016425pabpn110096.996ENSAMXG00000000452pabpn110096.996Astyanax_mexicanus
ENSAPOG00000016425pabpn18476.531ENSBTAG00000050594-7679.293Bos_taurus
ENSAPOG00000016425pabpn18483.333ENSBTAG00000006884PABPN18669.318Bos_taurus
ENSAPOG00000016425pabpn18182.812ENSBTAG00000053753-7182.812Bos_taurus
ENSAPOG00000016425pabpn16258.904WBGene00003904pabp-28655.000Caenorhabditis_elegans
ENSAPOG00000016425pabpn19975.536ENSCJAG00000007960-8475.966Callithrix_jacchus
ENSAPOG00000016425pabpn17179.762ENSCJAG00000004407-8479.762Callithrix_jacchus
ENSAPOG00000016425pabpn18682.039ENSCAFG00000011482PABPN18670.833Canis_familiaris
ENSAPOG00000016425pabpn18682.039ENSCAFG00020007298-8670.455Canis_lupus_dingo
ENSAPOG00000016425pabpn18682.039ENSCAFG00020006651-8670.455Canis_lupus_dingo
ENSAPOG00000016425pabpn18682.039ENSCHIG00000012184PABPN18670.455Capra_hircus
ENSAPOG00000016425pabpn19972.103ENSTSYG00000033996BCL2L2-PABPN19481.548Carlito_syrichta
ENSAPOG00000016425pabpn15981.295ENSCAPG00000009461-9981.295Cavia_aperea
ENSAPOG00000016425pabpn18681.553ENSCPOG00000025574PABPN16881.340Cavia_porcellus
ENSAPOG00000016425pabpn19975.536ENSCCAG00000033954BCL2L2-PABPN18475.966Cebus_capucinus
ENSAPOG00000016425pabpn19975.536ENSCATG00000038536BCL2L2-PABPN18475.966Cercocebus_atys
ENSAPOG00000016425pabpn16581.457ENSCLAG00000012423PABPN15681.457Chinchilla_lanigera
ENSAPOG00000016425pabpn18680.583ENSCSAG00000016036PABPN18669.318Chlorocebus_sabaeus
ENSAPOG00000016425pabpn18972.857ENSCHOG00000004798BCL2L2-PABPN19270.909Choloepus_hoffmanni
ENSAPOG00000016425pabpn17184.524ENSCPBG00000026060-9484.524Chrysemys_picta_bellii
ENSAPOG00000016425pabpn19062.559ENSCING00000012468-8962.085Ciona_intestinalis
ENSAPOG00000016425pabpn17664.045ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSAPOG00000016425pabpn18571.212ENSCANG00000030980-8764.286Colobus_angolensis_palliatus
ENSAPOG00000016425pabpn19972.103ENSCANG00000009750BCL2L2-PABPN19481.548Colobus_angolensis_palliatus
ENSAPOG00000016425pabpn18681.553ENSCGRG00001019696Pabpn19480.952Cricetulus_griseus_chok1gshd
ENSAPOG00000016425pabpn16391.156ENSCGRG00000011102Pabpn19191.156Cricetulus_griseus_crigri
ENSAPOG00000016425pabpn110097.414ENSCSEG00000008774pabpn110097.414Cynoglossus_semilaevis
ENSAPOG00000016425pabpn110094.218ENSCVAG00000003152pabpn110095.299Cyprinodon_variegatus
ENSAPOG00000016425pabpn18153.476ENSDARG00000087996pabpn1l8659.184Danio_rerio
ENSAPOG00000016425pabpn110096.983ENSDARG00000045373pabpn110096.983Danio_rerio
ENSAPOG00000016425pabpn18682.039ENSDNOG00000023682PABPN18670.455Dasypus_novemcinctus
ENSAPOG00000016425pabpn18681.068ENSDORG00000028966-8669.318Dipodomys_ordii
ENSAPOG00000016425pabpn15682.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSAPOG00000016425pabpn110057.983FBgn0005648Pabp29758.333Drosophila_melanogaster
ENSAPOG00000016425pabpn19972.845ENSEBUG00000002322pabpn19972.845Eptatretus_burgeri
ENSAPOG00000016425pabpn18682.039ENSEASG00005011716PABPN18670.455Equus_asinus_asinus
ENSAPOG00000016425pabpn18581.373ENSECAG00000011652PABPN18569.960Equus_caballus
ENSAPOG00000016425pabpn18680.097ENSEEUG00000012973-6978.325Erinaceus_europaeus
ENSAPOG00000016425pabpn110094.515ENSELUG00000022654pabpn110094.515Esox_lucius
ENSAPOG00000016425pabpn18682.039ENSFCAG00000031922PABPN18670.455Felis_catus
ENSAPOG00000016425pabpn17181.548ENSFDAG00000018381BCL2L2-PABPN19481.548Fukomys_damarensis
ENSAPOG00000016425pabpn110095.259ENSFHEG00000007215pabpn110095.259Fundulus_heteroclitus
ENSAPOG00000016425pabpn110092.632ENSGMOG00000003922pabpn110095.439Gadus_morhua
ENSAPOG00000016425pabpn18382.828ENSGALG00000052930-6182.938Gallus_gallus
ENSAPOG00000016425pabpn110097.436ENSGAFG00000017099pabpn110097.436Gambusia_affinis
ENSAPOG00000016425pabpn110097.887ENSGACG00000002167pabpn110097.887Gasterosteus_aculeatus
ENSAPOG00000016425pabpn18969.231ENSGGOG00000039675-9165.417Gorilla_gorilla
ENSAPOG00000016425pabpn19465.812ENSGGOG00000025919-9868.456Gorilla_gorilla
ENSAPOG00000016425pabpn19975.536ENSGGOG00000022683-8475.966Gorilla_gorilla
ENSAPOG00000016425pabpn110098.707ENSHBUG00000019523pabpn110098.707Haplochromis_burtoni
ENSAPOG00000016425pabpn18770.048ENSHGLG00000018588-7074.468Heterocephalus_glaber_female
ENSAPOG00000016425pabpn17164.072ENSHGLG00000009842-9364.072Heterocephalus_glaber_female
ENSAPOG00000016425pabpn18681.553ENSHGLG00000002927-9291.156Heterocephalus_glaber_female
ENSAPOG00000016425pabpn17170.659ENSHGLG00100018935-9472.093Heterocephalus_glaber_male
ENSAPOG00000016425pabpn18770.048ENSHGLG00100015565-8765.502Heterocephalus_glaber_male
ENSAPOG00000016425pabpn19471.041ENSHGLG00100006673-9291.156Heterocephalus_glaber_male
ENSAPOG00000016425pabpn110097.414ENSHCOG00000004655pabpn110097.414Hippocampus_comes
ENSAPOG00000016425pabpn110089.224ENSIPUG00000000180-9989.224Ictalurus_punctatus
ENSAPOG00000016425pabpn110097.414ENSIPUG00000008085PABPN110097.414Ictalurus_punctatus
ENSAPOG00000016425pabpn17181.548ENSSTOG00000029847BCL2L2-PABPN19481.548Ictidomys_tridecemlineatus
ENSAPOG00000016425pabpn17181.548ENSJJAG00000023507Gm205219481.548Jaculus_jaculus
ENSAPOG00000016425pabpn110097.544ENSKMAG00000018748pabpn110097.544Kryptolebias_marmoratus
ENSAPOG00000016425pabpn110099.569ENSLBEG00000027266pabpn110099.569Labrus_bergylta
ENSAPOG00000016425pabpn17588.202ENSLACG00000000646pabpn18584.536Latimeria_chalumnae
ENSAPOG00000016425pabpn19065.888ENSLOCG00000004694pabpn1l9965.888Lepisosteus_oculatus
ENSAPOG00000016425pabpn110092.982ENSLOCG00000000796pabpn110093.333Lepisosteus_oculatus
ENSAPOG00000016425pabpn16582.119ENSLAFG00000031227-9982.119Loxodonta_africana
ENSAPOG00000016425pabpn16174.648ENSMFAG00000031355-9974.648Macaca_fascicularis
ENSAPOG00000016425pabpn19972.103ENSMFAG00000032183BCL2L2-PABPN19481.548Macaca_fascicularis
ENSAPOG00000016425pabpn18668.293ENSMMUG00000048382-8958.364Macaca_mulatta
ENSAPOG00000016425pabpn19972.103ENSMMUG00000014747BCL2L2-PABPN110081.633Macaca_mulatta
ENSAPOG00000016425pabpn17968.984ENSMNEG00000035750-9974.648Macaca_nemestrina
ENSAPOG00000016425pabpn19975.536ENSMNEG00000045065BCL2L2-PABPN18475.966Macaca_nemestrina
ENSAPOG00000016425pabpn17266.467ENSMLEG00000034623-9972.535Mandrillus_leucophaeus
ENSAPOG00000016425pabpn19972.103ENSMLEG00000043862BCL2L2-PABPN19481.548Mandrillus_leucophaeus
ENSAPOG00000016425pabpn110097.887ENSMAMG00000007979pabpn110097.887Mastacembelus_armatus
ENSAPOG00000016425pabpn110098.592ENSMZEG00005011904pabpn110098.592Maylandia_zebra
ENSAPOG00000016425pabpn19972.103ENSMAUG00000007383Gm205218770.229Mesocricetus_auratus
ENSAPOG00000016425pabpn19975.966ENSMICG00000010002BCL2L2-PABPN18476.695Microcebus_murinus
ENSAPOG00000016425pabpn19972.103ENSMOCG00000018557Gm205219091.156Microtus_ochrogaster
ENSAPOG00000016425pabpn110099.138ENSMMOG00000005405pabpn110099.138Mola_mola
ENSAPOG00000016425pabpn18578.713ENSMODG00000004535-8269.444Monodelphis_domestica
ENSAPOG00000016425pabpn110098.944ENSMALG00000019612pabpn110098.944Monopterus_albus
ENSAPOG00000016425pabpn18680.583MGP_CAROLIEiJ_G0019277Pabpn19090.476Mus_caroli
ENSAPOG00000016425pabpn19971.245MGP_CAROLIEiJ_G0019276Gm205217071.245Mus_caroli
ENSAPOG00000016425pabpn18681.068ENSMUSG00000022194Pabpn19090.476Mus_musculus
ENSAPOG00000016425pabpn19971.674ENSMUSG00000092232Gm205217071.674Mus_musculus
ENSAPOG00000016425pabpn18681.068MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSAPOG00000016425pabpn19971.674MGP_PahariEiJ_G0030294Gm205217071.674Mus_pahari
ENSAPOG00000016425pabpn19971.674MGP_SPRETEiJ_G0020165Gm205217071.674Mus_spretus
ENSAPOG00000016425pabpn18681.068MGP_SPRETEiJ_G0020166Pabpn19090.476Mus_spretus
ENSAPOG00000016425pabpn16681.410ENSMPUG00000006775-9281.410Mustela_putorius_furo
ENSAPOG00000016425pabpn18480.808ENSMLUG00000028677-8572.881Myotis_lucifugus
ENSAPOG00000016425pabpn18182.632ENSMLUG00000003800-10082.632Myotis_lucifugus
ENSAPOG00000016425pabpn18879.048ENSMLUG00000012452-8270.635Myotis_lucifugus
ENSAPOG00000016425pabpn19972.532ENSNGAG00000019529Gm205217072.532Nannospalax_galili
ENSAPOG00000016425pabpn110098.944ENSNBRG00000023955pabpn110098.944Neolamprologus_brichardi
ENSAPOG00000016425pabpn18669.268ENSNLEG00000030598-7770.526Nomascus_leucogenys
ENSAPOG00000016425pabpn19972.103ENSNLEG00000015007-7481.818Nomascus_leucogenys
ENSAPOG00000016425pabpn16460.135ENSNLEG00000035292-9960.135Nomascus_leucogenys
ENSAPOG00000016425pabpn18674.384ENSODEG00000003739-8862.646Octodon_degus
ENSAPOG00000016425pabpn17672.067ENSODEG00000011555-8970.833Octodon_degus
ENSAPOG00000016425pabpn19971.674ENSODEG00000002083BCL2L2-PABPN16881.340Octodon_degus
ENSAPOG00000016425pabpn110098.944ENSONIG00000008112pabpn110098.944Oreochromis_niloticus
ENSAPOG00000016425pabpn16383.673ENSOANG00000009218-10083.673Ornithorhynchus_anatinus
ENSAPOG00000016425pabpn18681.553ENSOCUG00000016174PABPN19570.229Oryctolagus_cuniculus
ENSAPOG00000016425pabpn110097.887ENSORLG00000027900pabpn110097.887Oryzias_latipes
ENSAPOG00000016425pabpn19997.817ENSORLG00020004681pabpn110095.205Oryzias_latipes_hni
ENSAPOG00000016425pabpn110098.276ENSORLG00015000018pabpn110098.276Oryzias_latipes_hsok
ENSAPOG00000016425pabpn110098.592ENSOMEG00000016618pabpn110098.592Oryzias_melastigma
ENSAPOG00000016425pabpn18682.039ENSOGAG00000008710PABPN18670.455Otolemur_garnettii
ENSAPOG00000016425pabpn19972.103ENSOARG00000019336BCL2L2-PABPN16472.103Ovis_aries
ENSAPOG00000016425pabpn19972.103ENSPPAG00000028984BCL2L2-PABPN19281.410Pan_paniscus
ENSAPOG00000016425pabpn17166.867ENSPPAG00000039421-9366.867Pan_paniscus
ENSAPOG00000016425pabpn18682.039ENSPPRG00000010567PABPN18670.455Panthera_pardus
ENSAPOG00000016425pabpn17181.548ENSPTIG00000001063BCL2L2-PABPN19481.548Panthera_tigris_altaica
ENSAPOG00000016425pabpn19975.536ENSPTRG00000006167BCL2L28475.966Pan_troglodytes
ENSAPOG00000016425pabpn110062.821ENSPTRG00000047273-9360.317Pan_troglodytes
ENSAPOG00000016425pabpn19975.536ENSPANG00000021100BCL2L2-PABPN18475.966Papio_anubis
ENSAPOG00000016425pabpn18469.697ENSPANG00000023326-9975.352Papio_anubis
ENSAPOG00000016425pabpn110091.845ENSPKIG00000018052pabpn110095.279Paramormyrops_kingsleyae
ENSAPOG00000016425pabpn17169.512ENSPKIG00000008340pabpn1l8667.039Paramormyrops_kingsleyae
ENSAPOG00000016425pabpn110095.775ENSPKIG00000008144-10095.775Paramormyrops_kingsleyae
ENSAPOG00000016425pabpn15084.348ENSPSIG00000011959-9477.444Pelodiscus_sinensis
ENSAPOG00000016425pabpn19598.182ENSPMGG00000022027pabpn110092.958Periophthalmus_magnuspinnatus
ENSAPOG00000016425pabpn19972.103ENSPEMG00000008332Gm205218991.156Peromyscus_maniculatus_bairdii
ENSAPOG00000016425pabpn17975.806ENSPMAG00000006212pabpn19965.041Petromyzon_marinus
ENSAPOG00000016425pabpn18679.512ENSPCIG00000027751-8670.076Phascolarctos_cinereus
ENSAPOG00000016425pabpn110097.009ENSPFOG00000010351pabpn19997.009Poecilia_formosa
ENSAPOG00000016425pabpn110097.203ENSPLAG00000022696pabpn110097.203Poecilia_latipinna
ENSAPOG00000016425pabpn110097.009ENSPMEG00000020856pabpn110097.009Poecilia_mexicana
ENSAPOG00000016425pabpn110097.552ENSPREG00000011278pabpn110097.552Poecilia_reticulata
ENSAPOG00000016425pabpn18181.959ENSPPYG00000005663PABPN18969.841Pongo_abelii
ENSAPOG00000016425pabpn17968.750ENSPCAG00000005902PABPN18459.600Procavia_capensis
ENSAPOG00000016425pabpn19975.966ENSPCOG00000028047BCL2L2-PABPN18476.695Propithecus_coquereli
ENSAPOG00000016425pabpn18880.383ENSPVAG00000005270PABPN18669.202Pteropus_vampyrus
ENSAPOG00000016425pabpn110098.707ENSPNYG00000013182pabpn110098.707Pundamilia_nyererei
ENSAPOG00000016425pabpn110097.845ENSPNAG00000023526pabpn110097.845Pygocentrus_nattereri
ENSAPOG00000016425pabpn18862.319ENSPNAG00000021666pabpn1l9565.641Pygocentrus_nattereri
ENSAPOG00000016425pabpn18681.553ENSRNOG00000042195Pabpn18570.229Rattus_norvegicus
ENSAPOG00000016425pabpn18870.813ENSRBIG00000042811-9566.960Rhinopithecus_bieti
ENSAPOG00000016425pabpn18971.698ENSRBIG00000039547-8266.518Rhinopithecus_bieti
ENSAPOG00000016425pabpn19471.493ENSRBIG00000040762BCL2L2-PABPN16871.493Rhinopithecus_bieti
ENSAPOG00000016425pabpn18867.299ENSRROG00000036409-7064.192Rhinopithecus_roxellana
ENSAPOG00000016425pabpn19471.493ENSRROG00000045535BCL2L2-PABPN19481.548Rhinopithecus_roxellana
ENSAPOG00000016425pabpn19466.964ENSRROG00000040409-8266.964Rhinopithecus_roxellana
ENSAPOG00000016425pabpn19968.293ENSSBOG00000026930BCL2L2-PABPN19281.410Saimiri_boliviensis_boliviensis
ENSAPOG00000016425pabpn18180.952ENSSHAG00000014841-8783.158Sarcophilus_harrisii
ENSAPOG00000016425pabpn19962.185ENSSHAG00000007707-9958.824Sarcophilus_harrisii
ENSAPOG00000016425pabpn110096.552ENSSFOG00015014718pabpn110096.552Scleropages_formosus
ENSAPOG00000016425pabpn18064.516ENSSFOG00015015833pabpn1l8466.120Scleropages_formosus
ENSAPOG00000016425pabpn110090.129ENSSFOG00015012565pabpn110090.129Scleropages_formosus
ENSAPOG00000016425pabpn110099.138ENSSMAG00000020157pabpn110099.138Scophthalmus_maximus
ENSAPOG00000016425pabpn110099.296ENSSDUG00000020582pabpn110099.296Seriola_dumerili
ENSAPOG00000016425pabpn110099.569ENSSLDG00000007118pabpn110099.569Seriola_lalandi_dorsalis
ENSAPOG00000016425pabpn17183.929ENSSPUG00000018308-9483.929Sphenodon_punctatus
ENSAPOG00000016425pabpn110098.947ENSSPAG00000021658pabpn110098.947Stegastes_partitus
ENSAPOG00000016425pabpn19972.103ENSSSCG00000002023PABPN18670.455Sus_scrofa
ENSAPOG00000016425pabpn19262.500ENSSSCG00000034805-7958.571Sus_scrofa
ENSAPOG00000016425pabpn110097.887ENSTRUG00000023664pabpn110097.887Takifugu_rubripes
ENSAPOG00000016425pabpn19293.023ENSTNIG00000005369pabpn19397.512Tetraodon_nigroviridis
ENSAPOG00000016425pabpn18682.039ENSUAMG00000024460PABPN16881.818Ursus_americanus
ENSAPOG00000016425pabpn19972.103ENSUMAG00000014288BCL2L2-PABPN17072.103Ursus_maritimus
ENSAPOG00000016425pabpn19972.103ENSVVUG00000019912BCL2L2-PABPN17682.474Vulpes_vulpes
ENSAPOG00000016425pabpn18485.714ENSXETG00000014597pabpn17382.407Xenopus_tropicalis
ENSAPOG00000016425pabpn17585.714ENSXCOG00000005158pabpn19885.714Xiphophorus_couchianus
ENSAPOG00000016425pabpn110097.863ENSXMAG00000006196pabpn110097.863Xiphophorus_maculatus

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