EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000016489 (Gene tree)
Gene ID: 110970927
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 12948 bases
Position: chrMVNR01000049.1:1104400-1117347
Accession: 110970927
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000030088	GTP_EFTU	PF00009.27	3.4e-63	1	1
ENSAPOP00000013609	GTP_EFTU	PF00009.27	1.2e-59	1	1
ENSAPOP00000013609	GTP_EFTU_D2	PF03144.25	3.2e-17	1	1
ENSAPOP00000030088	GTP_EFTU_D2	PF03144.25	3.3e-17	1	1
ENSAPOP00000030088	EFG_IV	PF03764.18	1.6e-37	1	1
ENSAPOP00000013609	EFG_IV	PF03764.18	1.9e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000021841	-	2492	XM_022221242	ENSAPOP00000030088	701 (aa)	XP_022076934	-
ENSAPOT00000021817	-	2094	-	ENSAPOP00000013609	697 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000016489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000016489's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000016489	gfm1	76	38.194	ENSAPOG00000004529	-	69	38.194
ENSAPOG00000016489	gfm1	96	33.565	ENSAPOG00000005965	gfm2	89	33.705
ENSAPOG00000016489	gfm1	52	33.871	ENSAPOG00000000402	guf1	61	36.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000016489	gfm1	97	78.394	ENSG00000168827	GFM1	100	91.667	Homo_sapiens
ENSAPOG00000016489	gfm1	96	80.568	ENSAMEG00000013542	GFM1	93	78.378	Ailuropoda_melanoleuca
ENSAPOG00000016489	gfm1	95	83.910	ENSACIG00000014465	gfm1	86	83.910	Amphilophus_citrinellus
ENSAPOG00000016489	gfm1	99	95.415	ENSAOCG00000006023	gfm1	93	95.415	Amphiprion_ocellaris
ENSAPOG00000016489	gfm1	99	95.272	ENSAPEG00000024499	gfm1	93	95.272	Amphiprion_percula
ENSAPOG00000016489	gfm1	98	88.372	ENSATEG00000013789	gfm1	92	88.372	Anabas_testudineus
ENSAPOG00000016489	gfm1	96	78.924	ENSAPLG00000005022	GFM1	92	79.699	Anas_platyrhynchos
ENSAPOG00000016489	gfm1	96	79.852	ENSACAG00000006829	GFM1	92	79.764	Anolis_carolinensis
ENSAPOG00000016489	gfm1	99	76.605	ENSANAG00000035983	GFM1	93	76.605	Aotus_nancymaae
ENSAPOG00000016489	gfm1	98	89.244	ENSACLG00000016586	gfm1	92	89.244	Astatotilapia_calliptera
ENSAPOG00000016489	gfm1	99	82.521	ENSAMXG00000013435	gfm1	91	83.700	Astyanax_mexicanus
ENSAPOG00000016489	gfm1	96	79.491	ENSBTAG00000027795	GFM1	89	79.641	Bos_taurus
ENSAPOG00000016489	gfm1	96	57.036	WBGene00009246	gfm-1	89	57.036	Caenorhabditis_elegans
ENSAPOG00000016489	gfm1	96	79.372	ENSCJAG00000000363	GFM1	90	78.994	Callithrix_jacchus
ENSAPOG00000016489	gfm1	97	80.176	ENSCAFG00000009006	GFM1	95	80.435	Canis_familiaris
ENSAPOG00000016489	gfm1	97	80.059	ENSCAFG00020005878	GFM1	92	81.016	Canis_lupus_dingo
ENSAPOG00000016489	gfm1	96	79.790	ENSCHIG00000015220	GFM1	89	79.940	Capra_hircus
ENSAPOG00000016489	gfm1	99	77.667	ENSTSYG00000002013	GFM1	93	77.667	Carlito_syrichta
ENSAPOG00000016489	gfm1	96	69.585	ENSCAPG00000005699	GFM1	90	69.585	Cavia_aperea
ENSAPOG00000016489	gfm1	99	77.699	ENSCPOG00000001194	GFM1	93	77.699	Cavia_porcellus
ENSAPOG00000016489	gfm1	99	76.454	ENSCCAG00000025561	GFM1	93	76.454	Cebus_capucinus
ENSAPOG00000016489	gfm1	99	77.603	ENSCATG00000037622	GFM1	93	77.603	Cercocebus_atys
ENSAPOG00000016489	gfm1	96	79.372	ENSCLAG00000002503	GFM1	90	78.698	Chinchilla_lanigera
ENSAPOG00000016489	gfm1	99	77.746	ENSCSAG00000012162	GFM1	93	77.746	Chlorocebus_sabaeus
ENSAPOG00000016489	gfm1	99	68.079	ENSCHOG00000004867	GFM1	93	68.079	Choloepus_hoffmanni
ENSAPOG00000016489	gfm1	99	79.256	ENSCPBG00000018367	GFM1	93	79.256	Chrysemys_picta_bellii
ENSAPOG00000016489	gfm1	96	58.284	ENSCING00000011960	-	88	58.284	Ciona_intestinalis
ENSAPOG00000016489	gfm1	96	60.921	ENSCSAVG00000008514	-	97	58.046	Ciona_savignyi
ENSAPOG00000016489	gfm1	97	78.832	ENSCANG00000031714	GFM1	93	77.746	Colobus_angolensis_palliatus
ENSAPOG00000016489	gfm1	99	76.890	ENSCGRG00001022095	GFM1	93	76.890	Cricetulus_griseus_chok1gshd
ENSAPOG00000016489	gfm1	99	76.890	ENSCGRG00000012043	GFM1	93	76.890	Cricetulus_griseus_crigri
ENSAPOG00000016489	gfm1	95	83.308	ENSCSEG00000017088	gfm1	92	83.308	Cynoglossus_semilaevis
ENSAPOG00000016489	gfm1	99	89.398	ENSCVAG00000004126	gfm1	94	90.075	Cyprinodon_variegatus
ENSAPOG00000016489	gfm1	99	80.659	ENSDARG00000063624	gfm1	93	80.659	Danio_rerio
ENSAPOG00000016489	gfm1	54	76.923	ENSDNOG00000016385	-	92	76.923	Dasypus_novemcinctus
ENSAPOG00000016489	gfm1	96	78.176	ENSDORG00000014165	Gfm1	89	78.176	Dipodomys_ordii
ENSAPOG00000016489	gfm1	96	67.612	FBgn0263133	mEFG1	90	67.612	Drosophila_melanogaster
ENSAPOG00000016489	gfm1	96	71.088	ENSETEG00000019197	GFM1	89	71.386	Echinops_telfairi
ENSAPOG00000016489	gfm1	91	63.608	ENSEBUG00000012794	gfm1	94	63.608	Eptatretus_burgeri
ENSAPOG00000016489	gfm1	96	57.824	ENSEEUG00000000429	GFM1	92	57.824	Erinaceus_europaeus
ENSAPOG00000016489	gfm1	98	83.430	ENSELUG00000014728	gfm1	92	83.430	Esox_lucius
ENSAPOG00000016489	gfm1	96	79.970	ENSFCAG00000013291	GFM1	93	77.699	Felis_catus
ENSAPOG00000016489	gfm1	93	78.615	ENSFALG00000007619	GFM1	96	78.615	Ficedula_albicollis
ENSAPOG00000016489	gfm1	99	77.415	ENSFDAG00000016559	GFM1	93	77.415	Fukomys_damarensis
ENSAPOG00000016489	gfm1	99	88.252	ENSFHEG00000006091	gfm1	93	88.252	Fundulus_heteroclitus
ENSAPOG00000016489	gfm1	95	84.408	ENSGMOG00000010161	gfm1	92	84.408	Gadus_morhua
ENSAPOG00000016489	gfm1	96	79.762	ENSGALG00000009634	GFM1	91	79.762	Gallus_gallus
ENSAPOG00000016489	gfm1	99	88.968	ENSGAFG00000012527	gfm1	93	88.968	Gambusia_affinis
ENSAPOG00000016489	gfm1	99	87.983	ENSGACG00000009864	gfm1	93	87.983	Gasterosteus_aculeatus
ENSAPOG00000016489	gfm1	97	78.686	ENSGGOG00000003085	GFM1	93	77.603	Gorilla_gorilla
ENSAPOG00000016489	gfm1	98	89.244	ENSHBUG00000002120	gfm1	92	89.244	Haplochromis_burtoni
ENSAPOG00000016489	gfm1	96	79.821	ENSHGLG00000016855	GFM1	93	76.989	Heterocephalus_glaber_female
ENSAPOG00000016489	gfm1	96	79.821	ENSHGLG00100013049	GFM1	93	76.989	Heterocephalus_glaber_male
ENSAPOG00000016489	gfm1	98	86.773	ENSHCOG00000007638	gfm1	99	87.857	Hippocampus_comes
ENSAPOG00000016489	gfm1	99	81.805	ENSIPUG00000005873	gfm1	93	81.805	Ictalurus_punctatus
ENSAPOG00000016489	gfm1	96	78.326	ENSSTOG00000010150	GFM1	91	77.811	Ictidomys_tridecemlineatus
ENSAPOG00000016489	gfm1	99	76.934	ENSJJAG00000016447	Gfm1	93	76.934	Jaculus_jaculus
ENSAPOG00000016489	gfm1	98	86.628	ENSKMAG00000020768	gfm1	92	86.628	Kryptolebias_marmoratus
ENSAPOG00000016489	gfm1	97	88.218	ENSLBEG00000021315	gfm1	99	88.218	Labrus_bergylta
ENSAPOG00000016489	gfm1	98	79.215	ENSLACG00000012295	GFM1	92	79.215	Latimeria_chalumnae
ENSAPOG00000016489	gfm1	95	77.794	ENSLOCG00000003778	gfm1	92	77.794	Lepisosteus_oculatus
ENSAPOG00000016489	gfm1	99	76.614	ENSLAFG00000010945	GFM1	93	76.614	Loxodonta_africana
ENSAPOG00000016489	gfm1	99	77.746	ENSMFAG00000035731	GFM1	93	77.746	Macaca_fascicularis
ENSAPOG00000016489	gfm1	99	77.746	ENSMMUG00000004961	GFM1	93	77.746	Macaca_mulatta
ENSAPOG00000016489	gfm1	99	78.367	ENSMNEG00000033245	GFM1	93	78.367	Macaca_nemestrina
ENSAPOG00000016489	gfm1	96	77.578	ENSMLEG00000030908	GFM1	93	77.536	Mandrillus_leucophaeus
ENSAPOG00000016489	gfm1	99	88.825	ENSMAMG00000011760	gfm1	93	88.825	Mastacembelus_armatus
ENSAPOG00000016489	gfm1	98	89.390	ENSMZEG00005016639	gfm1	92	89.390	Maylandia_zebra
ENSAPOG00000016489	gfm1	96	79.790	ENSMGAG00000010641	GFM1	90	79.790	Meleagris_gallopavo
ENSAPOG00000016489	gfm1	96	79.790	ENSMAUG00000000611	Gfm1	90	79.111	Mesocricetus_auratus
ENSAPOG00000016489	gfm1	96	79.970	ENSMICG00000049086	GFM1	90	79.882	Microcebus_murinus
ENSAPOG00000016489	gfm1	99	77.318	ENSMOCG00000000465	Gfm1	93	77.318	Microtus_ochrogaster
ENSAPOG00000016489	gfm1	95	87.087	ENSMMOG00000012538	gfm1	90	87.087	Mola_mola
ENSAPOG00000016489	gfm1	98	78.363	ENSMODG00000015673	GFM1	92	78.363	Monodelphis_domestica
ENSAPOG00000016489	gfm1	96	86.377	ENSMALG00000012508	gfm1	89	86.377	Monopterus_albus
ENSAPOG00000016489	gfm1	96	79.491	MGP_CAROLIEiJ_G0025052	Gfm1	94	82.200	Mus_caroli
ENSAPOG00000016489	gfm1	96	79.491	ENSMUSG00000027774	Gfm1	89	79.491	Mus_musculus
ENSAPOG00000016489	gfm1	99	76.890	MGP_PahariEiJ_G0026495	Gfm1	100	78.652	Mus_pahari
ENSAPOG00000016489	gfm1	96	79.491	MGP_SPRETEiJ_G0025994	Gfm1	94	82.200	Mus_spretus
ENSAPOG00000016489	gfm1	96	81.016	ENSMPUG00000002859	GFM1	90	80.621	Mustela_putorius_furo
ENSAPOG00000016489	gfm1	96	80.269	ENSMLUG00000000452	GFM1	90	80.030	Myotis_lucifugus
ENSAPOG00000016489	gfm1	99	76.429	ENSNGAG00000012375	Gfm1	93	76.429	Nannospalax_galili
ENSAPOG00000016489	gfm1	96	88.323	ENSNBRG00000004631	gfm1	92	89.072	Neolamprologus_brichardi
ENSAPOG00000016489	gfm1	96	79.821	ENSNLEG00000004176	GFM1	93	77.461	Nomascus_leucogenys
ENSAPOG00000016489	gfm1	95	70.571	ENSMEUG00000007784	GFM1	97	70.571	Notamacropus_eugenii
ENSAPOG00000016489	gfm1	99	77.396	ENSOPRG00000009860	GFM1	93	77.396	Ochotona_princeps
ENSAPOG00000016489	gfm1	96	79.821	ENSODEG00000004316	GFM1	93	77.273	Octodon_degus
ENSAPOG00000016489	gfm1	98	89.244	ENSONIG00000003772	gfm1	92	89.244	Oreochromis_niloticus
ENSAPOG00000016489	gfm1	96	80.269	ENSOCUG00000013561	GFM1	91	79.240	Oryctolagus_cuniculus
ENSAPOG00000016489	gfm1	94	88.737	ENSORLG00000006487	gfm1	93	88.737	Oryzias_latipes
ENSAPOG00000016489	gfm1	99	87.536	ENSORLG00020003362	gfm1	93	87.536	Oryzias_latipes_hni
ENSAPOG00000016489	gfm1	98	88.372	ENSORLG00015005829	gfm1	92	88.372	Oryzias_latipes_hsok
ENSAPOG00000016489	gfm1	98	89.390	ENSOMEG00000012894	gfm1	92	89.390	Oryzias_melastigma
ENSAPOG00000016489	gfm1	96	78.924	ENSOGAG00000008298	GFM1	90	78.846	Otolemur_garnettii
ENSAPOG00000016489	gfm1	95	79.341	ENSOARG00000002409	GFM1	92	79.341	Ovis_aries
ENSAPOG00000016489	gfm1	97	78.686	ENSPPAG00000033881	GFM1	93	77.603	Pan_paniscus
ENSAPOG00000016489	gfm1	96	79.970	ENSPPRG00000009281	GFM1	93	77.699	Panthera_pardus
ENSAPOG00000016489	gfm1	96	79.970	ENSPTIG00000012416	GFM1	93	77.699	Panthera_tigris_altaica
ENSAPOG00000016489	gfm1	97	78.686	ENSPTRG00000015570	GFM1	93	77.603	Pan_troglodytes
ENSAPOG00000016489	gfm1	99	77.746	ENSPANG00000016512	GFM1	93	77.746	Papio_anubis
ENSAPOG00000016489	gfm1	99	82.665	ENSPKIG00000004876	gfm1	93	82.665	Paramormyrops_kingsleyae
ENSAPOG00000016489	gfm1	98	79.365	ENSPSIG00000012567	GFM1	92	79.365	Pelodiscus_sinensis
ENSAPOG00000016489	gfm1	96	83.881	ENSPMGG00000014068	gfm1	92	84.812	Periophthalmus_magnuspinnatus
ENSAPOG00000016489	gfm1	99	76.748	ENSPEMG00000008942	Gfm1	93	76.748	Peromyscus_maniculatus_bairdii
ENSAPOG00000016489	gfm1	92	77.054	ENSPCIG00000020195	GFM1	95	80.000	Phascolarctos_cinereus
ENSAPOG00000016489	gfm1	99	89.112	ENSPFOG00000011022	gfm1	93	89.112	Poecilia_formosa
ENSAPOG00000016489	gfm1	99	88.825	ENSPLAG00000019585	gfm1	98	88.825	Poecilia_latipinna
ENSAPOG00000016489	gfm1	99	88.968	ENSPMEG00000012376	gfm1	93	88.968	Poecilia_mexicana
ENSAPOG00000016489	gfm1	99	88.968	ENSPREG00000001332	gfm1	89	88.968	Poecilia_reticulata
ENSAPOG00000016489	gfm1	96	79.460	ENSPPYG00000014244	GFM1	93	77.175	Pongo_abelii
ENSAPOG00000016489	gfm1	96	78.176	ENSPCAG00000008934	GFM1	95	78.176	Procavia_capensis
ENSAPOG00000016489	gfm1	96	79.522	ENSPCOG00000022259	GFM1	93	76.989	Propithecus_coquereli
ENSAPOG00000016489	gfm1	96	79.073	ENSPVAG00000013605	GFM1	90	78.698	Pteropus_vampyrus
ENSAPOG00000016489	gfm1	98	89.099	ENSPNYG00000006037	gfm1	92	89.099	Pundamilia_nyererei
ENSAPOG00000016489	gfm1	99	82.235	ENSPNAG00000001237	gfm1	93	82.235	Pygocentrus_nattereri
ENSAPOG00000016489	gfm1	96	79.880	ENSRNOG00000012873	Gfm1	90	78.963	Rattus_norvegicus
ENSAPOG00000016489	gfm1	97	78.686	ENSRBIG00000031363	GFM1	93	77.603	Rhinopithecus_bieti
ENSAPOG00000016489	gfm1	97	78.832	ENSRROG00000031081	GFM1	93	77.746	Rhinopithecus_roxellana
ENSAPOG00000016489	gfm1	94	57.617	YLR069C	-	86	57.617	Saccharomyces_cerevisiae
ENSAPOG00000016489	gfm1	99	76.748	ENSSBOG00000023252	GFM1	93	76.748	Saimiri_boliviensis_boliviensis
ENSAPOG00000016489	gfm1	96	79.730	ENSSHAG00000017772	GFM1	90	79.464	Sarcophilus_harrisii
ENSAPOG00000016489	gfm1	98	83.019	ENSSFOG00015003117	gfm1	92	83.019	Scleropages_formosus
ENSAPOG00000016489	gfm1	99	88.252	ENSSMAG00000013221	gfm1	93	88.252	Scophthalmus_maximus
ENSAPOG00000016489	gfm1	99	88.825	ENSSDUG00000018665	gfm1	93	88.825	Seriola_dumerili
ENSAPOG00000016489	gfm1	99	88.682	ENSSLDG00000020606	gfm1	93	88.682	Seriola_lalandi_dorsalis
ENSAPOG00000016489	gfm1	98	76.778	ENSSPUG00000018686	GFM1	93	76.778	Sphenodon_punctatus
ENSAPOG00000016489	gfm1	98	92.587	ENSSPAG00000008800	gfm1	92	92.587	Stegastes_partitus
ENSAPOG00000016489	gfm1	96	79.341	ENSSSCG00000025651	GFM1	89	79.641	Sus_scrofa
ENSAPOG00000016489	gfm1	99	85.817	ENSTRUG00000009244	gfm1	97	82.897	Takifugu_rubripes
ENSAPOG00000016489	gfm1	98	87.645	ENSTNIG00000007729	gfm1	92	87.645	Tetraodon_nigroviridis
ENSAPOG00000016489	gfm1	92	70.140	ENSTBEG00000017404	GFM1	85	70.140	Tupaia_belangeri
ENSAPOG00000016489	gfm1	96	79.341	ENSTTRG00000001735	GFM1	87	80.547	Tursiops_truncatus
ENSAPOG00000016489	gfm1	96	80.269	ENSUAMG00000026381	GFM1	90	80.030	Ursus_americanus
ENSAPOG00000016489	gfm1	96	80.269	ENSUMAG00000011268	GFM1	90	80.030	Ursus_maritimus
ENSAPOG00000016489	gfm1	96	76.198	ENSVPAG00000009444	GFM1	90	75.852	Vicugna_pacos
ENSAPOG00000016489	gfm1	96	80.717	ENSVVUG00000020091	GFM1	95	80.124	Vulpes_vulpes
ENSAPOG00000016489	gfm1	98	80.491	ENSXETG00000032551	GFM1	92	80.491	Xenopus_tropicalis
ENSAPOG00000016489	gfm1	57	87.841	ENSXCOG00000012590	gfm1	93	87.841	Xiphophorus_couchianus
ENSAPOG00000016489	gfm1	99	88.682	ENSXMAG00000000261	gfm1	93	88.682	Xiphophorus_maculatus