EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000016582 (Gene tree)
Gene ID: 110949676
Gene Symbol: -
Alias: zgc:109966
Full Name: poly(rC)-binding protein 3
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 24815 bases
Position: chrMVNR01000117.1:422359-447173
Accession: 110949676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000013728	KH_1	PF00013.29	1.1e-54	1	3
ENSAPOP00000013728	KH_1	PF00013.29	1.1e-54	2	3
ENSAPOP00000013728	KH_1	PF00013.29	1.1e-54	3	3
ENSAPOP00000030160	KH_1	PF00013.29	2e-48	1	3
ENSAPOP00000030160	KH_1	PF00013.29	2e-48	2	3
ENSAPOP00000030160	KH_1	PF00013.29	2e-48	3	3
ENSAPOP00000013728	KH_2	PF07650.17	2.4e-14	1	1
ENSAPOP00000030160	KH_2	PF07650.17	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000032532	-	975	XM_022191843	ENSAPOP00000030160	324 (aa)	XP_022047535	-
ENSAPOT00000021957	-	2327	XM_022191841	ENSAPOP00000013728	327 (aa)	XP_022047533	UPI000873D0B0

Gene Model

Click here to download ENSAPOG00000016582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000016582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000016582	-	87	37.500	ENSAPOG00000016135	fubp3	73	37.500
ENSAPOG00000016582	-	88	40.845	ENSAPOG00000002171	nova1	54	40.845
ENSAPOG00000016582	-	99	72.222	ENSAPOG00000023735	zgc:110045	96	74.603
ENSAPOG00000016582	-	94	31.690	ENSAPOG00000007660	igf2bp1	59	31.507
ENSAPOG00000016582	-	72	36.000	ENSAPOG00000014845	fubp1	51	36.923
ENSAPOG00000016582	-	74	70.886	ENSAPOG00000018462	-	71	71.250
ENSAPOG00000016582	-	92	63.497	ENSAPOG00000009897	-	71	63.497
ENSAPOG00000016582	-	94	78.896	ENSAPOG00000003089	pcbp2	96	78.896
ENSAPOG00000016582	-	94	78.095	ENSAPOG00000019824	PCBP2	96	78.095
ENSAPOG00000016582	-	76	52.857	ENSAPOG00000011203	hnrnpk	58	52.857
ENSAPOG00000016582	-	91	34.161	ENSAPOG00000004098	igf2bp2a	64	34.375
ENSAPOG00000016582	-	87	39.683	ENSAPOG00000018241	-	65	39.683
ENSAPOG00000016582	-	65	39.706	ENSAPOG00000012989	KHSRP	57	39.706
ENSAPOG00000016582	-	99	92.523	ENSAPOG00000020003	pcbp3	89	92.523
ENSAPOG00000016582	-	79	46.914	ENSAPOG00000006764	hnrpkl	52	52.857
ENSAPOG00000016582	-	66	41.176	ENSAPOG00000009524	khsrp	69	41.176
ENSAPOG00000016582	-	94	33.333	ENSAPOG00000017377	igf2bp3	62	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000016582	-	98	88.166	ENSAMEG00000001697	-	99	85.345	Ailuropoda_melanoleuca
ENSAPOG00000016582	-	100	98.466	ENSACIG00000002739	-	100	98.466	Amphilophus_citrinellus
ENSAPOG00000016582	-	100	88.571	ENSACIG00000010933	pcbp3	100	88.571	Amphilophus_citrinellus
ENSAPOG00000016582	-	97	95.899	ENSAOCG00000008592	-	100	95.899	Amphiprion_ocellaris
ENSAPOG00000016582	-	91	95.053	ENSAOCG00000007806	-	100	93.624	Amphiprion_ocellaris
ENSAPOG00000016582	-	100	97.840	ENSAPEG00000005209	-	100	97.840	Amphiprion_percula
ENSAPOG00000016582	-	100	90.909	ENSAPEG00000008011	pcbp3	100	90.909	Amphiprion_percula
ENSAPOG00000016582	-	100	97.531	ENSATEG00000009833	-	100	97.531	Anabas_testudineus
ENSAPOG00000016582	-	97	89.728	ENSATEG00000015787	-	100	89.728	Anabas_testudineus
ENSAPOG00000016582	-	98	89.489	ENSAPLG00000002975	-	95	93.082	Anas_platyrhynchos
ENSAPOG00000016582	-	98	75.477	ENSAPLG00000008951	-	82	75.477	Anas_platyrhynchos
ENSAPOG00000016582	-	98	84.314	ENSACAG00000004607	-	99	84.314	Anolis_carolinensis
ENSAPOG00000016582	-	99	82.111	ENSACAG00000009819	-	99	82.111	Anolis_carolinensis
ENSAPOG00000016582	-	91	96.930	ENSANAG00000030702	-	100	95.062	Aotus_nancymaae
ENSAPOG00000016582	-	100	99.388	ENSACLG00000003801	-	100	99.388	Astatotilapia_calliptera
ENSAPOG00000016582	-	100	90.057	ENSACLG00000011835	pcbp3	100	90.057	Astatotilapia_calliptera
ENSAPOG00000016582	-	95	68.788	ENSAMXG00000001760	zgc:110045	72	68.788	Astyanax_mexicanus
ENSAPOG00000016582	-	100	92.571	ENSAMXG00000003440	pcbp3	100	92.571	Astyanax_mexicanus
ENSAPOG00000016582	-	97	92.013	ENSAMXG00000013588	-	100	92.903	Astyanax_mexicanus
ENSAPOG00000016582	-	89	97.380	ENSCAFG00020019472	-	81	97.380	Canis_lupus_dingo
ENSAPOG00000016582	-	98	93.730	ENSCSAG00000007440	-	87	97.368	Chlorocebus_sabaeus
ENSAPOG00000016582	-	98	93.438	ENSCPBG00000012151	-	95	93.438	Chrysemys_picta_bellii
ENSAPOG00000016582	-	99	80.925	ENSCPBG00000000733	-	76	80.925	Chrysemys_picta_bellii
ENSAPOG00000016582	-	100	78.571	ENSCSEG00000016984	-	100	78.571	Cynoglossus_semilaevis
ENSAPOG00000016582	-	97	92.652	ENSCSEG00000000822	pcbp3	99	93.548	Cynoglossus_semilaevis
ENSAPOG00000016582	-	100	90.625	ENSCVAG00000014482	pcbp3	100	90.625	Cyprinodon_variegatus
ENSAPOG00000016582	-	100	99.083	ENSCVAG00000005262	-	100	99.083	Cyprinodon_variegatus
ENSAPOG00000016582	-	100	92.857	ENSDARG00000054378	pcbp3	100	92.857	Danio_rerio
ENSAPOG00000016582	-	98	82.445	ENSETEG00000015988	-	98	82.445	Echinops_telfairi
ENSAPOG00000016582	-	90	70.445	ENSEBUG00000005495	pcbp3	74	70.445	Eptatretus_burgeri
ENSAPOG00000016582	-	91	73.704	ENSEBUG00000016192	pcbp3	99	73.978	Eptatretus_burgeri
ENSAPOG00000016582	-	98	77.640	ENSEBUG00000007485	-	92	82.192	Eptatretus_burgeri
ENSAPOG00000016582	-	100	90.935	ENSELUG00000003521	pcbp3	100	90.935	Esox_lucius
ENSAPOG00000016582	-	100	98.777	ENSELUG00000001560	-	91	98.777	Esox_lucius
ENSAPOG00000016582	-	98	92.790	ENSFALG00000003949	-	95	97.039	Ficedula_albicollis
ENSAPOG00000016582	-	98	75.749	ENSFALG00000004411	-	77	75.749	Ficedula_albicollis
ENSAPOG00000016582	-	100	96.296	ENSFHEG00000006539	-	100	96.296	Fundulus_heteroclitus
ENSAPOG00000016582	-	98	93.671	ENSFHEG00000016615	pcbp3	97	93.060	Fundulus_heteroclitus
ENSAPOG00000016582	-	96	69.851	ENSGMOG00000008611	-	100	70.997	Gadus_morhua
ENSAPOG00000016582	-	94	81.682	ENSGMOG00000011992	pcbp3	96	81.682	Gadus_morhua
ENSAPOG00000016582	-	98	84.507	ENSGALG00000004394	-	98	89.674	Gallus_gallus
ENSAPOG00000016582	-	97	81.627	ENSGALG00000013155	-	99	81.627	Gallus_gallus
ENSAPOG00000016582	-	100	86.550	ENSGAFG00000011430	pcbp3	99	86.550	Gambusia_affinis
ENSAPOG00000016582	-	100	99.388	ENSGAFG00000010274	-	100	99.388	Gambusia_affinis
ENSAPOG00000016582	-	100	88.761	ENSGACG00000002266	-	97	92.447	Gasterosteus_aculeatus
ENSAPOG00000016582	-	100	77.747	ENSGACG00000014955	-	97	81.586	Gasterosteus_aculeatus
ENSAPOG00000016582	-	77	88.542	ENSGAGG00000006956	-	95	77.155	Gopherus_agassizii
ENSAPOG00000016582	-	89	89.513	ENSGAGG00000000271	-	100	89.513	Gopherus_agassizii
ENSAPOG00000016582	-	97	93.651	ENSHBUG00000010697	pcbp3	98	94.516	Haplochromis_burtoni
ENSAPOG00000016582	-	100	99.388	ENSHBUG00000021782	-	100	99.388	Haplochromis_burtoni
ENSAPOG00000016582	-	100	90.883	ENSHCOG00000017868	pcbp3	100	90.883	Hippocampus_comes
ENSAPOG00000016582	-	100	90.184	ENSHCOG00000006067	-	97	93.569	Hippocampus_comes
ENSAPOG00000016582	-	100	95.062	ENSIPUG00000006238	pcbp3	100	95.062	Ictalurus_punctatus
ENSAPOG00000016582	-	100	90.909	ENSKMAG00000003046	pcbp3	100	90.909	Kryptolebias_marmoratus
ENSAPOG00000016582	-	100	98.471	ENSKMAG00000018530	-	100	98.471	Kryptolebias_marmoratus
ENSAPOG00000016582	-	99	93.146	ENSLBEG00000006201	pcbp3	98	93.146	Labrus_bergylta
ENSAPOG00000016582	-	100	84.259	ENSLBEG00000006542	-	100	84.259	Labrus_bergylta
ENSAPOG00000016582	-	97	81.267	ENSLACG00000010386	pcbp3	77	81.267	Latimeria_chalumnae
ENSAPOG00000016582	-	99	75.543	ENSLACG00000010804	zgc:110045	77	75.543	Latimeria_chalumnae
ENSAPOG00000016582	-	98	89.911	ENSLOCG00000009369	pcbp3	99	89.911	Lepisosteus_oculatus
ENSAPOG00000016582	-	93	83.486	ENSLOCG00000005058	zgc:110045	80	83.486	Lepisosteus_oculatus
ENSAPOG00000016582	-	97	93.930	ENSMAMG00000022336	pcbp3	93	94.839	Mastacembelus_armatus
ENSAPOG00000016582	-	100	96.296	ENSMAMG00000011620	-	100	96.296	Mastacembelus_armatus
ENSAPOG00000016582	-	100	88.286	ENSMZEG00005008993	pcbp3	100	88.286	Maylandia_zebra
ENSAPOG00000016582	-	100	89.645	ENSMZEG00005014882	-	100	90.237	Maylandia_zebra
ENSAPOG00000016582	-	93	81.268	ENSMGAG00000001883	-	96	81.556	Meleagris_gallopavo
ENSAPOG00000016582	-	98	75.749	ENSMGAG00000006794	-	77	75.749	Meleagris_gallopavo
ENSAPOG00000016582	-	100	95.679	ENSMMOG00000005216	-	100	95.679	Mola_mola
ENSAPOG00000016582	-	95	93.910	ENSMMOG00000000730	pcbp3	88	93.910	Mola_mola
ENSAPOG00000016582	-	72	78.972	ENSMODG00000027884	-	93	78.972	Monodelphis_domestica
ENSAPOG00000016582	-	100	88.604	ENSMALG00000000691	pcbp3	100	88.604	Monopterus_albus
ENSAPOG00000016582	-	98	85.163	ENSMPUG00000001779	-	90	85.163	Mustela_putorius_furo
ENSAPOG00000016582	-	100	88.286	ENSNBRG00000016409	-	100	88.286	Neolamprologus_brichardi
ENSAPOG00000016582	-	100	90.237	ENSNBRG00000016714	-	100	90.237	Neolamprologus_brichardi
ENSAPOG00000016582	-	95	83.573	ENSOPRG00000003431	-	99	83.573	Ochotona_princeps
ENSAPOG00000016582	-	100	95.399	ENSONIG00000004611	-	97	99.035	Oreochromis_niloticus
ENSAPOG00000016582	-	97	83.569	ENSONIG00000012122	-	98	85.269	Oreochromis_niloticus
ENSAPOG00000016582	-	98	92.790	ENSOCUG00000002696	-	87	96.711	Oryctolagus_cuniculus
ENSAPOG00000016582	-	95	97.742	ENSORLG00000000059	pcbp3	100	97.742	Oryzias_latipes
ENSAPOG00000016582	-	99	98.773	ENSORLG00000022739	-	99	98.773	Oryzias_latipes
ENSAPOG00000016582	-	95	97.742	ENSORLG00020012671	pcbp3	97	97.742	Oryzias_latipes_hni
ENSAPOG00000016582	-	99	98.466	ENSORLG00020006124	-	99	98.466	Oryzias_latipes_hni
ENSAPOG00000016582	-	99	98.773	ENSORLG00015008051	-	99	98.773	Oryzias_latipes_hsok
ENSAPOG00000016582	-	95	97.742	ENSORLG00015000429	pcbp3	97	97.742	Oryzias_latipes_hsok
ENSAPOG00000016582	-	90	96.441	ENSOMEG00000020811	pcbp3	97	96.441	Oryzias_melastigma
ENSAPOG00000016582	-	100	95.370	ENSOMEG00000020162	-	97	98.714	Oryzias_melastigma
ENSAPOG00000016582	-	98	81.944	ENSOGAG00000008044	-	99	81.944	Otolemur_garnettii
ENSAPOG00000016582	-	100	98.165	ENSPKIG00000019329	pcbp3	100	98.165	Paramormyrops_kingsleyae
ENSAPOG00000016582	-	81	81.095	ENSPKIG00000020913	-	86	81.095	Paramormyrops_kingsleyae
ENSAPOG00000016582	-	94	77.778	ENSPSIG00000008350	-	68	82.114	Pelodiscus_sinensis
ENSAPOG00000016582	-	98	80.357	ENSPSIG00000014970	-	95	84.112	Pelodiscus_sinensis
ENSAPOG00000016582	-	100	90.857	ENSPMGG00000022383	pcbp3	100	90.857	Periophthalmus_magnuspinnatus
ENSAPOG00000016582	-	76	88.830	ENSPMAG00000004637	-	97	88.830	Petromyzon_marinus
ENSAPOG00000016582	-	94	74.522	ENSPMAG00000004551	pcbp3	90	74.522	Petromyzon_marinus
ENSAPOG00000016582	-	98	89.021	ENSPCIG00000028092	-	99	89.021	Phascolarctos_cinereus
ENSAPOG00000016582	-	100	81.389	ENSPLAG00000011449	pcbp3	100	76.500	Poecilia_latipinna
ENSAPOG00000016582	-	99	91.892	ENSPLAG00000004074	-	92	91.892	Poecilia_latipinna
ENSAPOG00000016582	-	99	91.496	ENSPMEG00000006653	-	99	91.496	Poecilia_mexicana
ENSAPOG00000016582	-	100	90.113	ENSPMEG00000021239	pcbp3	100	90.113	Poecilia_mexicana
ENSAPOG00000016582	-	97	92.332	ENSPREG00000015736	pcbp3	99	92.949	Poecilia_reticulata
ENSAPOG00000016582	-	100	95.679	ENSPREG00000020585	-	100	95.679	Poecilia_reticulata
ENSAPOG00000016582	-	97	93.968	ENSPNYG00000012326	pcbp3	95	94.839	Pundamilia_nyererei
ENSAPOG00000016582	-	100	95.988	ENSPNYG00000013205	-	100	95.988	Pundamilia_nyererei
ENSAPOG00000016582	-	100	88.889	ENSPNAG00000008541	-	98	93.506	Pygocentrus_nattereri
ENSAPOG00000016582	-	100	95.092	ENSPNAG00000015104	pcbp3	97	98.714	Pygocentrus_nattereri
ENSAPOG00000016582	-	98	93.417	ENSRNOG00000001245	Pcbp3	95	97.368	Rattus_norvegicus
ENSAPOG00000016582	-	98	84.592	ENSRBIG00000028177	-	99	76.152	Rhinopithecus_bieti
ENSAPOG00000016582	-	98	87.611	ENSSHAG00000007890	-	96	91.049	Sarcophilus_harrisii
ENSAPOG00000016582	-	100	98.777	ENSSFOG00015010205	pcbp3	100	98.777	Scleropages_formosus
ENSAPOG00000016582	-	100	90.000	ENSSFOG00015014706	pcbp3	100	90.000	Scleropages_formosus
ENSAPOG00000016582	-	98	82.650	ENSSFOG00015007118	-	93	85.430	Scleropages_formosus
ENSAPOG00000016582	-	97	94.249	ENSSMAG00000011929	pcbp3	97	95.161	Scophthalmus_maximus
ENSAPOG00000016582	-	100	99.083	ENSSMAG00000003135	-	100	99.083	Scophthalmus_maximus
ENSAPOG00000016582	-	97	88.889	ENSSDUG00000011608	pcbp3	99	88.889	Seriola_dumerili
ENSAPOG00000016582	-	100	93.636	ENSSDUG00000008502	-	100	93.636	Seriola_dumerili
ENSAPOG00000016582	-	97	88.889	ENSSLDG00000008518	pcbp3	99	88.889	Seriola_lalandi_dorsalis
ENSAPOG00000016582	-	100	100.000	ENSSLDG00000020161	-	100	100.000	Seriola_lalandi_dorsalis
ENSAPOG00000016582	-	95	77.810	ENSSPUG00000013214	-	92	82.131	Sphenodon_punctatus
ENSAPOG00000016582	-	91	95.053	ENSSPAG00000004190	-	100	93.960	Stegastes_partitus
ENSAPOG00000016582	-	100	78.571	ENSSPAG00000023341	-	100	78.571	Stegastes_partitus
ENSAPOG00000016582	-	98	84.302	ENSTGUG00000003316	-	96	87.963	Taeniopygia_guttata
ENSAPOG00000016582	-	98	86.207	ENSTGUG00000008158	-	96	90.461	Taeniopygia_guttata
ENSAPOG00000016582	-	91	99.281	ENSTRUG00000006280	-	99	90.654	Takifugu_rubripes
ENSAPOG00000016582	-	100	92.353	ENSTRUG00000013604	pcbp3	100	92.353	Takifugu_rubripes
ENSAPOG00000016582	-	98	83.193	ENSTTRG00000015075	-	99	83.193	Tursiops_truncatus
ENSAPOG00000016582	-	98	86.136	ENSXETG00000011483	pcbp1	96	89.506	Xenopus_tropicalis
ENSAPOG00000016582	-	93	74.504	ENSXETG00000010491	pcbp2	77	74.504	Xenopus_tropicalis
ENSAPOG00000016582	-	100	90.113	ENSXCOG00000020481	pcbp3	100	90.113	Xiphophorus_couchianus
ENSAPOG00000016582	-	100	99.694	ENSXMAG00000028711	-	100	99.694	Xiphophorus_maculatus
ENSAPOG00000016582	-	100	90.909	ENSXMAG00000008175	pcbp3	100	90.909	Xiphophorus_maculatus