EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000016610 (Gene tree)
Gene ID: 110954360
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 74416 bases
Position: chrMVNR01000343.1:67379-141794
Accession: 110954360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000030206	PPR	PF01535.20	1.8e-33	1	5
ENSAPOP00000030206	PPR	PF01535.20	1.8e-33	2	5
ENSAPOP00000030206	PPR	PF01535.20	1.8e-33	3	5
ENSAPOP00000030206	PPR	PF01535.20	1.8e-33	4	5
ENSAPOP00000030206	PPR	PF01535.20	1.8e-33	5	5
ENSAPOP00000013794	PPR	PF01535.20	3.2e-31	1	5
ENSAPOP00000013794	PPR	PF01535.20	3.2e-31	2	5
ENSAPOP00000013794	PPR	PF01535.20	3.2e-31	3	5
ENSAPOP00000013794	PPR	PF01535.20	3.2e-31	4	5
ENSAPOP00000013794	PPR	PF01535.20	3.2e-31	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000022034	-	4334	-	ENSAPOP00000013794	1350 (aa)	-	-
ENSAPOT00000022069	-	4562	XM_022198834	ENSAPOP00000030206	1426 (aa)	XP_022054526	UPI000B8FFBFE

Gene Model

Click here to download ENSAPOG00000016610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000016610's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000016610	lrpprc	96	51.524	ENSAMEG00000005852	LRPPRC	99	51.375	Ailuropoda_melanoleuca
ENSAPOG00000016610	lrpprc	100	73.931	ENSACIG00000009604	lrpprc	99	73.931	Amphilophus_citrinellus
ENSAPOG00000016610	lrpprc	100	90.483	ENSAOCG00000005886	lrpprc	100	90.553	Amphiprion_ocellaris
ENSAPOG00000016610	lrpprc	100	85.056	ENSAPEG00000002937	lrpprc	98	85.126	Amphiprion_percula
ENSAPOG00000016610	lrpprc	92	71.961	ENSATEG00000010555	lrpprc	97	71.961	Anabas_testudineus
ENSAPOG00000016610	lrpprc	94	56.900	ENSACAG00000029278	LRPPRC	99	55.232	Anolis_carolinensis
ENSAPOG00000016610	lrpprc	99	50.982	ENSANAG00000027440	LRPPRC	97	57.036	Aotus_nancymaae
ENSAPOG00000016610	lrpprc	96	73.300	ENSACLG00000023712	lrpprc	92	82.241	Astatotilapia_calliptera
ENSAPOG00000016610	lrpprc	95	51.901	ENSCJAG00000000794	LRPPRC	89	60.000	Callithrix_jacchus
ENSAPOG00000016610	lrpprc	97	52.009	ENSCHIG00000020173	LRPPRC	99	51.971	Capra_hircus
ENSAPOG00000016610	lrpprc	94	42.336	ENSCAPG00000013631	LRPPRC	99	42.336	Cavia_aperea
ENSAPOG00000016610	lrpprc	85	50.532	ENSCPOG00000000204	LRPPRC	99	50.532	Cavia_porcellus
ENSAPOG00000016610	lrpprc	99	51.086	ENSCCAG00000031900	LRPPRC	97	56.367	Cebus_capucinus
ENSAPOG00000016610	lrpprc	99	50.666	ENSCATG00000014187	LRPPRC	97	57.250	Cercocebus_atys
ENSAPOG00000016610	lrpprc	99	50.210	ENSCLAG00000005203	LRPPRC	99	50.210	Chinchilla_lanigera
ENSAPOG00000016610	lrpprc	99	51.156	ENSCSAG00000013233	LRPPRC	99	51.296	Chlorocebus_sabaeus
ENSAPOG00000016610	lrpprc	84	50.718	ENSCHOG00000003631	LRPPRC	84	50.718	Choloepus_hoffmanni
ENSAPOG00000016610	lrpprc	94	49.963	ENSCANG00000034961	LRPPRC	99	77.387	Colobus_angolensis_palliatus
ENSAPOG00000016610	lrpprc	99	50.842	ENSCGRG00001016261	Lrpprc	99	50.842	Cricetulus_griseus_chok1gshd
ENSAPOG00000016610	lrpprc	99	50.842	ENSCGRG00000004072	Lrpprc	99	50.842	Cricetulus_griseus_crigri
ENSAPOG00000016610	lrpprc	100	52.315	ENSCSEG00000003850	lrpprc	96	58.984	Cynoglossus_semilaevis
ENSAPOG00000016610	lrpprc	100	77.645	ENSCVAG00000012967	lrpprc	100	77.645	Cyprinodon_variegatus
ENSAPOG00000016610	lrpprc	99	58.587	ENSDARG00000043970	lrpprc	98	58.587	Danio_rerio
ENSAPOG00000016610	lrpprc	82	42.831	ENSDNOG00000032336	-	95	42.831	Dasypus_novemcinctus
ENSAPOG00000016610	lrpprc	99	50.946	ENSDNOG00000012594	-	99	51.086	Dasypus_novemcinctus
ENSAPOG00000016610	lrpprc	97	52.028	ENSDORG00000012233	Lrpprc	99	51.823	Dipodomys_ordii
ENSAPOG00000016610	lrpprc	99	51.332	ENSETEG00000006657	LRPPRC	99	51.332	Echinops_telfairi
ENSAPOG00000016610	lrpprc	77	56.618	ENSEEUG00000012340	LRPPRC	81	56.618	Erinaceus_europaeus
ENSAPOG00000016610	lrpprc	95	58.845	ENSELUG00000012803	lrpprc	99	58.845	Esox_lucius
ENSAPOG00000016610	lrpprc	99	51.964	ENSFCAG00000013468	LRPPRC	99	52.384	Felis_catus
ENSAPOG00000016610	lrpprc	94	50.223	ENSFALG00000012738	LRPPRC	99	50.223	Ficedula_albicollis
ENSAPOG00000016610	lrpprc	99	49.302	ENSFDAG00000015328	LRPPRC	99	49.302	Fukomys_damarensis
ENSAPOG00000016610	lrpprc	100	75.473	ENSFHEG00000019604	lrpprc	100	75.473	Fundulus_heteroclitus
ENSAPOG00000016610	lrpprc	99	64.245	ENSGMOG00000008337	lrpprc	99	64.245	Gadus_morhua
ENSAPOG00000016610	lrpprc	99	75.106	ENSGAFG00000001455	lrpprc	99	75.106	Gambusia_affinis
ENSAPOG00000016610	lrpprc	99	71.169	ENSGACG00000010679	lrpprc	99	73.196	Gasterosteus_aculeatus
ENSAPOG00000016610	lrpprc	100	80.659	ENSHBUG00000000393	lrpprc	98	80.659	Haplochromis_burtoni
ENSAPOG00000016610	lrpprc	99	49.267	ENSHGLG00000006123	LRPPRC	99	49.267	Heterocephalus_glaber_female
ENSAPOG00000016610	lrpprc	59	47.045	ENSHGLG00100005960	-	99	47.045	Heterocephalus_glaber_male
ENSAPOG00000016610	lrpprc	99	72.218	ENSHCOG00000002107	lrpprc	100	72.218	Hippocampus_comes
ENSAPOG00000016610	lrpprc	99	62.248	ENSIPUG00000009406	lrpprc	99	62.248	Ictalurus_punctatus
ENSAPOG00000016610	lrpprc	99	50.629	ENSSTOG00000011185	LRPPRC	99	50.734	Ictidomys_tridecemlineatus
ENSAPOG00000016610	lrpprc	94	51.737	ENSJJAG00000020475	Lrpprc	99	50.772	Jaculus_jaculus
ENSAPOG00000016610	lrpprc	99	65.057	ENSKMAG00000003287	lrpprc	85	65.057	Kryptolebias_marmoratus
ENSAPOG00000016610	lrpprc	100	64.316	ENSLBEG00000023225	lrpprc	96	72.568	Labrus_bergylta
ENSAPOG00000016610	lrpprc	100	57.212	ENSLACG00000014030	LRPPRC	100	57.212	Latimeria_chalumnae
ENSAPOG00000016610	lrpprc	99	61.329	ENSLOCG00000016390	lrpprc	97	61.595	Lepisosteus_oculatus
ENSAPOG00000016610	lrpprc	99	49.055	ENSLAFG00000008614	LRPPRC	99	49.161	Loxodonta_africana
ENSAPOG00000016610	lrpprc	99	50.806	ENSMFAG00000041560	LRPPRC	99	77.387	Macaca_fascicularis
ENSAPOG00000016610	lrpprc	99	50.035	ENSMMUG00000019841	LRPPRC	99	77.889	Macaca_mulatta
ENSAPOG00000016610	lrpprc	99	51.124	ENSMNEG00000031613	LRPPRC	97	57.250	Macaca_nemestrina
ENSAPOG00000016610	lrpprc	98	65.053	ENSMAMG00000021835	lrpprc	98	65.347	Mastacembelus_armatus
ENSAPOG00000016610	lrpprc	100	80.799	ENSMZEG00005027379	lrpprc	99	80.799	Maylandia_zebra
ENSAPOG00000016610	lrpprc	99	50.596	ENSMAUG00000012118	Lrpprc	99	50.959	Mesocricetus_auratus
ENSAPOG00000016610	lrpprc	99	51.439	ENSMICG00000010486	LRPPRC	97	56.015	Microcebus_murinus
ENSAPOG00000016610	lrpprc	99	51.862	ENSMOCG00000006048	Lrpprc	99	51.862	Microtus_ochrogaster
ENSAPOG00000016610	lrpprc	100	70.066	ENSMMOG00000007830	lrpprc	94	77.059	Mola_mola
ENSAPOG00000016610	lrpprc	95	52.241	ENSMODG00000000648	LRPPRC	99	52.992	Monodelphis_domestica
ENSAPOG00000016610	lrpprc	100	70.988	ENSMALG00000001271	lrpprc	99	70.988	Monopterus_albus
ENSAPOG00000016610	lrpprc	96	52.202	ENSMPUG00000011800	LRPPRC	99	53.013	Mustela_putorius_furo
ENSAPOG00000016610	lrpprc	99	51.647	ENSMLUG00000010575	LRPPRC	99	51.717	Myotis_lucifugus
ENSAPOG00000016610	lrpprc	99	51.581	ENSNGAG00000013069	Lrpprc	99	51.581	Nannospalax_galili
ENSAPOG00000016610	lrpprc	94	71.238	ENSNBRG00000013202	lrpprc	92	79.915	Neolamprologus_brichardi
ENSAPOG00000016610	lrpprc	99	50.000	ENSNLEG00000016782	LRPPRC	99	55.091	Nomascus_leucogenys
ENSAPOG00000016610	lrpprc	87	55.738	ENSOPRG00000016774	LRPPRC	92	45.980	Ochotona_princeps
ENSAPOG00000016610	lrpprc	99	50.526	ENSODEG00000011211	LRPPRC	99	50.526	Octodon_degus
ENSAPOG00000016610	lrpprc	100	80.729	ENSONIG00000000917	lrpprc	100	78.892	Oreochromis_niloticus
ENSAPOG00000016610	lrpprc	74	47.887	ENSOANG00000014670	-	100	47.887	Ornithorhynchus_anatinus
ENSAPOG00000016610	lrpprc	99	51.327	ENSOCUG00000015046	LRPPRC	96	51.327	Oryctolagus_cuniculus
ENSAPOG00000016610	lrpprc	100	71.838	ENSORLG00000004605	lrpprc	99	69.135	Oryzias_latipes
ENSAPOG00000016610	lrpprc	91	75.385	ENSORLG00020012536	lrpprc	99	74.821	Oryzias_latipes_hni
ENSAPOG00000016610	lrpprc	100	70.168	ENSORLG00015018270	lrpprc	100	70.238	Oryzias_latipes_hsok
ENSAPOG00000016610	lrpprc	95	51.707	ENSOGAG00000012798	LRPPRC	99	51.228	Otolemur_garnettii
ENSAPOG00000016610	lrpprc	95	52.605	ENSOARG00000006522	LRPPRC	99	51.611	Ovis_aries
ENSAPOG00000016610	lrpprc	99	49.755	ENSPPAG00000040876	LRPPRC	97	56.285	Pan_paniscus
ENSAPOG00000016610	lrpprc	99	51.964	ENSPPRG00000006578	LRPPRC	99	52.174	Panthera_pardus
ENSAPOG00000016610	lrpprc	95	53.075	ENSPTIG00000000933	LRPPRC	97	53.075	Panthera_tigris_altaica
ENSAPOG00000016610	lrpprc	99	50.736	ENSPTRG00000011880	LRPPRC	97	56.497	Pan_troglodytes
ENSAPOG00000016610	lrpprc	99	50.596	ENSPANG00000020731	LRPPRC	97	56.874	Papio_anubis
ENSAPOG00000016610	lrpprc	95	48.939	ENSPKIG00000022232	lrpprc	97	59.302	Paramormyrops_kingsleyae
ENSAPOG00000016610	lrpprc	61	53.547	ENSPSIG00000006830	-	99	54.348	Pelodiscus_sinensis
ENSAPOG00000016610	lrpprc	67	63.979	ENSPMGG00000016597	lrpprc	97	63.979	Periophthalmus_magnuspinnatus
ENSAPOG00000016610	lrpprc	93	46.356	ENSPMAG00000002147	lrpprc	99	46.661	Petromyzon_marinus
ENSAPOG00000016610	lrpprc	99	73.573	ENSPFOG00000011227	lrpprc	99	73.573	Poecilia_formosa
ENSAPOG00000016610	lrpprc	99	73.784	ENSPLAG00000004018	lrpprc	99	73.784	Poecilia_latipinna
ENSAPOG00000016610	lrpprc	99	73.362	ENSPMEG00000016425	lrpprc	99	73.362	Poecilia_mexicana
ENSAPOG00000016610	lrpprc	99	73.592	ENSPREG00000003662	lrpprc	99	73.592	Poecilia_reticulata
ENSAPOG00000016610	lrpprc	57	48.157	ENSPPYG00000029532	-	99	48.157	Pongo_abelii
ENSAPOG00000016610	lrpprc	79	55.413	ENSPCAG00000001430	LRPPRC	81	55.515	Procavia_capensis
ENSAPOG00000016610	lrpprc	99	49.440	ENSPVAG00000002007	LRPPRC	99	49.440	Pteropus_vampyrus
ENSAPOG00000016610	lrpprc	100	70.160	ENSPNYG00000000756	lrpprc	100	70.160	Pundamilia_nyererei
ENSAPOG00000016610	lrpprc	99	64.566	ENSPNAG00000002895	lrpprc	99	64.566	Pygocentrus_nattereri
ENSAPOG00000016610	lrpprc	94	51.846	ENSRNOG00000005877	Lrpprc	99	50.805	Rattus_norvegicus
ENSAPOG00000016610	lrpprc	99	49.477	ENSRBIG00000031552	LRPPRC	99	49.477	Rhinopithecus_bieti
ENSAPOG00000016610	lrpprc	99	51.122	ENSSBOG00000011807	LRPPRC	97	56.848	Saimiri_boliviensis_boliviensis
ENSAPOG00000016610	lrpprc	94	51.216	ENSSHAG00000018725	LRPPRC	99	51.216	Sarcophilus_harrisii
ENSAPOG00000016610	lrpprc	99	56.362	ENSSFOG00015001042	lrpprc	99	56.362	Scleropages_formosus
ENSAPOG00000016610	lrpprc	100	74.230	ENSSDUG00000019062	lrpprc	99	74.230	Seriola_dumerili
ENSAPOG00000016610	lrpprc	100	68.317	ENSSLDG00000023028	lrpprc	100	68.647	Seriola_lalandi_dorsalis
ENSAPOG00000016610	lrpprc	90	49.147	ENSSARG00000000426	LRPPRC	99	49.147	Sorex_araneus
ENSAPOG00000016610	lrpprc	100	69.406	ENSSPAG00000000162	lrpprc	100	69.737	Stegastes_partitus
ENSAPOG00000016610	lrpprc	99	51.332	ENSSSCG00000008452	LRPPRC	99	51.332	Sus_scrofa
ENSAPOG00000016610	lrpprc	93	48.165	ENSTGUG00000003759	LRPPRC	99	48.165	Taeniopygia_guttata
ENSAPOG00000016610	lrpprc	99	70.933	ENSTRUG00000008409	lrpprc	96	70.933	Takifugu_rubripes
ENSAPOG00000016610	lrpprc	99	69.144	ENSTNIG00000007470	lrpprc	100	69.985	Tetraodon_nigroviridis
ENSAPOG00000016610	lrpprc	99	49.789	ENSTTRG00000006403	LRPPRC	99	50.000	Tursiops_truncatus
ENSAPOG00000016610	lrpprc	94	49.446	ENSVPAG00000008993	LRPPRC	99	49.446	Vicugna_pacos
ENSAPOG00000016610	lrpprc	99	56.552	ENSXETG00000009296	lrpprc	99	57.337	Xenopus_tropicalis
ENSAPOG00000016610	lrpprc	98	68.559	ENSXCOG00000013343	lrpprc	95	70.450	Xiphophorus_couchianus
ENSAPOG00000016610	lrpprc	99	74.542	ENSXMAG00000018108	lrpprc	99	74.542	Xiphophorus_maculatus