EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000017002 (Gene tree)
Gene ID: 110956763
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 8543 bases
Position: chrMVNR01000492.1:706319-714861
Accession: 110956763
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000030433	Exo_endo_phos	PF03372.23	2.6e-19	1	1
ENSAPOP00000030429	Exo_endo_phos	PF03372.23	3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000022478	-	4812	XM_022202464	ENSAPOP00000030433	305 (aa)	XP_022058156	UPI000B90698A
ENSAPOT00000022483	-	4005	-	ENSAPOP00000030429	326 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000017002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000017002's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000017002	apex1	91	69.534	ENSG00000100823	APEX1	88	69.534	Homo_sapiens
ENSAPOG00000017002	apex1	91	69.176	ENSAMEG00000005418	APEX1	88	69.176	Ailuropoda_melanoleuca
ENSAPOG00000017002	apex1	91	90.253	ENSACIG00000010653	apex1	95	90.357	Amphilophus_citrinellus
ENSAPOG00000017002	apex1	100	96.129	ENSAOCG00000009649	apex1	100	96.129	Amphiprion_ocellaris
ENSAPOG00000017002	apex1	100	96.452	ENSAPEG00000021453	apex1	100	96.452	Amphiprion_percula
ENSAPOG00000017002	apex1	99	88.026	ENSATEG00000002883	apex1	97	88.026	Anabas_testudineus
ENSAPOG00000017002	apex1	92	70.714	ENSACAG00000008099	APEX1	88	70.714	Anolis_carolinensis
ENSAPOG00000017002	apex1	91	69.892	ENSANAG00000030117	APEX1	88	69.892	Aotus_nancymaae
ENSAPOG00000017002	apex1	97	90.169	ENSACLG00000018441	apex1	100	88.387	Astatotilapia_calliptera
ENSAPOG00000017002	apex1	99	83.388	ENSAMXG00000034699	apex1	90	87.143	Astyanax_mexicanus
ENSAPOG00000017002	apex1	91	68.459	ENSBTAG00000002745	APEX1	88	68.459	Bos_taurus
ENSAPOG00000017002	apex1	92	43.706	WBGene00001372	exo-3	92	44.944	Caenorhabditis_elegans
ENSAPOG00000017002	apex1	91	69.892	ENSCJAG00000009726	APEX1	88	69.892	Callithrix_jacchus
ENSAPOG00000017002	apex1	91	69.892	ENSCAFG00000032033	APEX1	88	69.892	Canis_familiaris
ENSAPOG00000017002	apex1	91	69.892	ENSCAFG00020014377	-	88	69.892	Canis_lupus_dingo
ENSAPOG00000017002	apex1	89	55.351	ENSCHIG00000014537	-	86	55.351	Capra_hircus
ENSAPOG00000017002	apex1	91	68.459	ENSCHIG00000007298	-	88	68.459	Capra_hircus
ENSAPOG00000017002	apex1	94	67.820	ENSTSYG00000034813	APEX1	88	68.817	Carlito_syrichta
ENSAPOG00000017002	apex1	87	63.504	ENSCAPG00000016235	APEX1	91	69.492	Cavia_aperea
ENSAPOG00000017002	apex1	95	68.041	ENSCPOG00000030909	APEX1	88	69.534	Cavia_porcellus
ENSAPOG00000017002	apex1	91	60.215	ENSCCAG00000031931	-	87	60.215	Cebus_capucinus
ENSAPOG00000017002	apex1	91	69.892	ENSCCAG00000033056	-	88	69.892	Cebus_capucinus
ENSAPOG00000017002	apex1	95	67.931	ENSCATG00000015580	APEX1	88	69.176	Cercocebus_atys
ENSAPOG00000017002	apex1	94	68.858	ENSCLAG00000001002	APEX1	88	69.892	Chinchilla_lanigera
ENSAPOG00000017002	apex1	95	68.276	ENSCSAG00000016685	-	88	69.534	Chlorocebus_sabaeus
ENSAPOG00000017002	apex1	95	68.276	ENSCSAG00000016670	-	88	69.534	Chlorocebus_sabaeus
ENSAPOG00000017002	apex1	99	66.772	ENSCPBG00000009567	APEX1	87	72.662	Chrysemys_picta_bellii
ENSAPOG00000017002	apex1	99	54.817	ENSCING00000008137	-	85	58.801	Ciona_intestinalis
ENSAPOG00000017002	apex1	88	50.746	ENSCSAVG00000007144	-	100	52.326	Ciona_savignyi
ENSAPOG00000017002	apex1	98	66.667	ENSCANG00000030726	APEX1	88	69.534	Colobus_angolensis_palliatus
ENSAPOG00000017002	apex1	99	63.175	ENSCGRG00001017046	Apex1	88	67.742	Cricetulus_griseus_chok1gshd
ENSAPOG00000017002	apex1	99	63.175	ENSCGRG00000008984	Apex1	88	67.742	Cricetulus_griseus_crigri
ENSAPOG00000017002	apex1	100	87.097	ENSCSEG00000017499	apex1	99	87.097	Cynoglossus_semilaevis
ENSAPOG00000017002	apex1	100	90.000	ENSCVAG00000022075	apex1	100	90.000	Cyprinodon_variegatus
ENSAPOG00000017002	apex1	99	82.566	ENSDARG00000045843	apex1	98	82.566	Danio_rerio
ENSAPOG00000017002	apex1	91	65.950	ENSDNOG00000042234	APEX1	83	65.950	Dasypus_novemcinctus
ENSAPOG00000017002	apex1	99	64.873	ENSDORG00000001616	Apex1	88	69.534	Dipodomys_ordii
ENSAPOG00000017002	apex1	91	69.534	ENSETEG00000004855	-	88	69.534	Echinops_telfairi
ENSAPOG00000017002	apex1	78	60.504	ENSEBUG00000000622	-	92	60.504	Eptatretus_burgeri
ENSAPOG00000017002	apex1	99	66.007	ENSEASG00005017489	APEX1	65	69.892	Equus_asinus_asinus
ENSAPOG00000017002	apex1	99	66.007	ENSECAG00000022325	APEX1	72	69.892	Equus_caballus
ENSAPOG00000017002	apex1	88	69.145	ENSEEUG00000012569	APEX1	93	69.145	Erinaceus_europaeus
ENSAPOG00000017002	apex1	99	80.000	ENSELUG00000021706	apex1	99	81.935	Esox_lucius
ENSAPOG00000017002	apex1	94	68.858	ENSFCAG00000030869	APEX1	88	69.892	Felis_catus
ENSAPOG00000017002	apex1	94	69.204	ENSFDAG00000006120	APEX1	88	70.251	Fukomys_damarensis
ENSAPOG00000017002	apex1	100	89.677	ENSFHEG00000009031	apex1	83	89.677	Fundulus_heteroclitus
ENSAPOG00000017002	apex1	100	75.241	ENSGMOG00000007943	apex1	99	75.241	Gadus_morhua
ENSAPOG00000017002	apex1	100	91.290	ENSGAFG00000005311	apex1	100	91.290	Gambusia_affinis
ENSAPOG00000017002	apex1	100	87.419	ENSGACG00000019497	apex1	100	89.139	Gasterosteus_aculeatus
ENSAPOG00000017002	apex1	99	66.456	ENSGAGG00000014999	APEX1	87	72.302	Gopherus_agassizii
ENSAPOG00000017002	apex1	91	69.176	ENSGGOG00000002128	APEX1	88	69.176	Gorilla_gorilla
ENSAPOG00000017002	apex1	100	88.673	ENSHBUG00000005894	apex1	100	88.673	Haplochromis_burtoni
ENSAPOG00000017002	apex1	94	68.858	ENSHGLG00000002848	APEX1	88	69.892	Heterocephalus_glaber_female
ENSAPOG00000017002	apex1	94	68.858	ENSHGLG00100017878	APEX1	88	69.892	Heterocephalus_glaber_male
ENSAPOG00000017002	apex1	100	86.174	ENSHCOG00000009961	apex1	100	86.174	Hippocampus_comes
ENSAPOG00000017002	apex1	99	82.623	ENSIPUG00000005799	apex1	98	82.623	Ictalurus_punctatus
ENSAPOG00000017002	apex1	91	69.892	ENSSTOG00000010096	APEX1	88	69.892	Ictidomys_tridecemlineatus
ENSAPOG00000017002	apex1	99	56.329	ENSJJAG00000003660	-	88	60.573	Jaculus_jaculus
ENSAPOG00000017002	apex1	91	62.007	ENSJJAG00000020465	-	90	62.007	Jaculus_jaculus
ENSAPOG00000017002	apex1	99	64.241	ENSJJAG00000012067	-	88	68.817	Jaculus_jaculus
ENSAPOG00000017002	apex1	100	88.387	ENSKMAG00000021171	apex1	100	88.387	Kryptolebias_marmoratus
ENSAPOG00000017002	apex1	100	87.419	ENSLBEG00000010248	apex1	100	87.419	Labrus_bergylta
ENSAPOG00000017002	apex1	99	72.222	ENSLACG00000008617	APEX1	89	75.357	Latimeria_chalumnae
ENSAPOG00000017002	apex1	98	76.159	ENSLOCG00000015516	apex1	88	78.571	Lepisosteus_oculatus
ENSAPOG00000017002	apex1	91	69.892	ENSLAFG00000021872	APEX1	88	69.892	Loxodonta_africana
ENSAPOG00000017002	apex1	94	68.166	ENSMFAG00000002565	APEX1	88	69.176	Macaca_fascicularis
ENSAPOG00000017002	apex1	94	68.166	ENSMMUG00000048039	APEX1	88	69.176	Macaca_mulatta
ENSAPOG00000017002	apex1	99	65.894	ENSMNEG00000036944	APEX1	88	69.176	Macaca_nemestrina
ENSAPOG00000017002	apex1	95	67.931	ENSMLEG00000042125	APEX1	88	69.176	Mandrillus_leucophaeus
ENSAPOG00000017002	apex1	100	87.419	ENSMAMG00000023526	apex1	100	87.419	Mastacembelus_armatus
ENSAPOG00000017002	apex1	97	90.169	ENSMZEG00005014187	apex1	100	88.387	Maylandia_zebra
ENSAPOG00000017002	apex1	99	63.376	ENSMAUG00000013994	Apex1	88	67.742	Mesocricetus_auratus
ENSAPOG00000017002	apex1	98	65.886	ENSMICG00000043554	APEX1	88	68.817	Microcebus_murinus
ENSAPOG00000017002	apex1	99	64.444	ENSMOCG00000013721	Apex1	88	69.534	Microtus_ochrogaster
ENSAPOG00000017002	apex1	100	83.280	ENSMMOG00000010031	apex1	97	83.280	Mola_mola
ENSAPOG00000017002	apex1	91	67.742	ENSMODG00000007125	APEX1	87	67.742	Monodelphis_domestica
ENSAPOG00000017002	apex1	92	82.500	ENSMALG00000011699	apex1	75	82.500	Monopterus_albus
ENSAPOG00000017002	apex1	99	65.287	MGP_CAROLIEiJ_G0019209	Apex1	88	69.784	Mus_caroli
ENSAPOG00000017002	apex1	99	65.397	ENSMUSG00000035960	Apex1	88	69.892	Mus_musculus
ENSAPOG00000017002	apex1	99	64.762	MGP_PahariEiJ_G0030232	Apex1	88	69.534	Mus_pahari
ENSAPOG00000017002	apex1	99	65.397	MGP_SPRETEiJ_G0020101	Apex1	88	69.892	Mus_spretus
ENSAPOG00000017002	apex1	98	66.221	ENSMLUG00000028957	APEX1	87	68.817	Myotis_lucifugus
ENSAPOG00000017002	apex1	85	51.923	ENSNGAG00000021748	-	72	54.583	Nannospalax_galili
ENSAPOG00000017002	apex1	98	65.886	ENSNGAG00000002725	-	88	68.817	Nannospalax_galili
ENSAPOG00000017002	apex1	97	90.169	ENSNBRG00000005334	apex1	91	88.387	Neolamprologus_brichardi
ENSAPOG00000017002	apex1	91	69.176	ENSNLEG00000010839	APEX1	89	69.176	Nomascus_leucogenys
ENSAPOG00000017002	apex1	99	63.782	ENSMEUG00000014519	APEX1	89	67.384	Notamacropus_eugenii
ENSAPOG00000017002	apex1	95	66.781	ENSOPRG00000014029	APEX1	88	68.100	Ochotona_princeps
ENSAPOG00000017002	apex1	94	68.858	ENSODEG00000001703	-	88	69.892	Octodon_degus
ENSAPOG00000017002	apex1	94	54.237	ENSODEG00000006583	-	87	54.737	Octodon_degus
ENSAPOG00000017002	apex1	91	53.047	ENSODEG00000004777	-	83	56.349	Octodon_degus
ENSAPOG00000017002	apex1	97	90.169	ENSONIG00000012089	apex1	100	88.387	Oreochromis_niloticus
ENSAPOG00000017002	apex1	90	68.000	ENSOANG00000008836	APEX1	68	68.000	Ornithorhynchus_anatinus
ENSAPOG00000017002	apex1	91	69.892	ENSOCUG00000005022	APEX1	88	69.892	Oryctolagus_cuniculus
ENSAPOG00000017002	apex1	100	88.103	ENSORLG00000012378	apex1	100	88.103	Oryzias_latipes
ENSAPOG00000017002	apex1	100	88.103	ENSORLG00020021371	apex1	100	88.103	Oryzias_latipes_hni
ENSAPOG00000017002	apex1	100	88.103	ENSORLG00015020089	apex1	100	88.103	Oryzias_latipes_hsok
ENSAPOG00000017002	apex1	100	88.424	ENSOMEG00000018876	apex1	100	88.424	Oryzias_melastigma
ENSAPOG00000017002	apex1	91	62.007	ENSOGAG00000029355	-	89	62.007	Otolemur_garnettii
ENSAPOG00000017002	apex1	94	68.858	ENSOGAG00000013335	-	88	69.892	Otolemur_garnettii
ENSAPOG00000017002	apex1	88	65.799	ENSOARG00000001876	-	87	65.799	Ovis_aries
ENSAPOG00000017002	apex1	94	56.055	ENSOARG00000014424	-	89	57.348	Ovis_aries
ENSAPOG00000017002	apex1	91	68.459	ENSOARG00000019740	-	88	68.459	Ovis_aries
ENSAPOG00000017002	apex1	91	69.534	ENSPPAG00000038760	APEX1	89	69.534	Pan_paniscus
ENSAPOG00000017002	apex1	91	69.892	ENSPPRG00000011794	APEX1	88	69.892	Panthera_pardus
ENSAPOG00000017002	apex1	94	68.858	ENSPTIG00000014829	APEX1	88	69.892	Panthera_tigris_altaica
ENSAPOG00000017002	apex1	91	69.534	ENSPTRG00000006093	APEX1	89	69.534	Pan_troglodytes
ENSAPOG00000017002	apex1	95	67.931	ENSPANG00000022757	APEX1	88	69.176	Papio_anubis
ENSAPOG00000017002	apex1	90	85.145	ENSPKIG00000003504	apex1	99	81.731	Paramormyrops_kingsleyae
ENSAPOG00000017002	apex1	89	75.824	ENSPMGG00000016596	apex1	80	75.824	Periophthalmus_magnuspinnatus
ENSAPOG00000017002	apex1	99	64.127	ENSPEMG00000019097	Apex1	88	68.817	Peromyscus_maniculatus_bairdii
ENSAPOG00000017002	apex1	94	69.759	ENSPMAG00000007275	-	95	70.968	Petromyzon_marinus
ENSAPOG00000017002	apex1	91	67.384	ENSPCIG00000023274	APEX1	87	67.384	Phascolarctos_cinereus
ENSAPOG00000017002	apex1	100	90.323	ENSPFOG00000004178	apex1	100	90.323	Poecilia_formosa
ENSAPOG00000017002	apex1	100	90.323	ENSPLAG00000012779	apex1	100	90.323	Poecilia_latipinna
ENSAPOG00000017002	apex1	100	90.323	ENSPMEG00000019623	apex1	100	90.323	Poecilia_mexicana
ENSAPOG00000017002	apex1	100	88.710	ENSPREG00000014298	apex1	99	88.710	Poecilia_reticulata
ENSAPOG00000017002	apex1	91	69.176	ENSPPYG00000005565	APEX1	88	69.176	Pongo_abelii
ENSAPOG00000017002	apex1	98	64.548	ENSPCAG00000010376	APEX1	88	67.742	Procavia_capensis
ENSAPOG00000017002	apex1	98	66.221	ENSPCOG00000021564	APEX1	88	69.176	Propithecus_coquereli
ENSAPOG00000017002	apex1	94	68.166	ENSPVAG00000010736	APEX1	87	69.176	Pteropus_vampyrus
ENSAPOG00000017002	apex1	97	90.508	ENSPNYG00000023940	apex1	100	88.710	Pundamilia_nyererei
ENSAPOG00000017002	apex1	90	86.131	ENSPNAG00000020897	apex1	93	84.058	Pygocentrus_nattereri
ENSAPOG00000017002	apex1	99	65.079	ENSRNOG00000009663	Apex1	88	69.534	Rattus_norvegicus
ENSAPOG00000017002	apex1	95	68.276	ENSRBIG00000038325	APEX1	87	69.534	Rhinopithecus_bieti
ENSAPOG00000017002	apex1	91	69.892	ENSSBOG00000018921	-	88	69.892	Saimiri_boliviensis_boliviensis
ENSAPOG00000017002	apex1	99	58.361	ENSSBOG00000031372	-	99	58.361	Saimiri_boliviensis_boliviensis
ENSAPOG00000017002	apex1	91	66.667	ENSSHAG00000013524	APEX1	87	66.667	Sarcophilus_harrisii
ENSAPOG00000017002	apex1	99	77.597	ENSSFOG00015001948	apex1	90	83.571	Scleropages_formosus
ENSAPOG00000017002	apex1	100	85.714	ENSSMAG00000013348	apex1	100	86.032	Scophthalmus_maximus
ENSAPOG00000017002	apex1	100	88.065	ENSSDUG00000016377	apex1	99	88.065	Seriola_dumerili
ENSAPOG00000017002	apex1	100	88.387	ENSSLDG00000023005	apex1	100	88.387	Seriola_lalandi_dorsalis
ENSAPOG00000017002	apex1	92	69.643	ENSSPUG00000000531	APEX1	94	69.534	Sphenodon_punctatus
ENSAPOG00000017002	apex1	100	92.258	ENSSPAG00000000458	apex1	100	92.258	Stegastes_partitus
ENSAPOG00000017002	apex1	97	39.404	ENSSSCG00000039705	-	89	41.516	Sus_scrofa
ENSAPOG00000017002	apex1	93	68.182	ENSSSCG00000040060	-	88	69.176	Sus_scrofa
ENSAPOG00000017002	apex1	77	57.447	ENSTGUG00000014378	APEX1	100	57.447	Taeniopygia_guttata
ENSAPOG00000017002	apex1	100	81.470	ENSTRUG00000004268	apex1	95	81.789	Takifugu_rubripes
ENSAPOG00000017002	apex1	100	83.442	ENSTNIG00000005778	apex1	100	83.442	Tetraodon_nigroviridis
ENSAPOG00000017002	apex1	91	66.667	ENSTBEG00000006405	APEX1	88	66.667	Tupaia_belangeri
ENSAPOG00000017002	apex1	77	68.511	ENSTTRG00000007860	APEX1	100	68.511	Tursiops_truncatus
ENSAPOG00000017002	apex1	95	67.698	ENSUAMG00000010457	APEX1	88	69.176	Ursus_americanus
ENSAPOG00000017002	apex1	95	67.698	ENSUMAG00000009178	APEX1	88	69.176	Ursus_maritimus
ENSAPOG00000017002	apex1	77	64.681	ENSVPAG00000005083	APEX1	100	64.681	Vicugna_pacos
ENSAPOG00000017002	apex1	91	69.534	ENSVVUG00000009010	APEX1	88	69.534	Vulpes_vulpes
ENSAPOG00000017002	apex1	92	71.786	ENSXETG00000024773	apex1	89	71.786	Xenopus_tropicalis
ENSAPOG00000017002	apex1	100	90.323	ENSXCOG00000015233	apex1	99	90.323	Xiphophorus_couchianus
ENSAPOG00000017002	apex1	100	90.323	ENSXMAG00000006195	apex1	100	90.323	Xiphophorus_maculatus