EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000017113 (Gene tree)
Gene ID: 110961421
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 10246 bases
Position: chrMVNR01000902.1:245838-256083
Accession: 110961421
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000014190	ResIII	PF04851.15	5.8e-07	1	1
ENSAPOP00000030458	ResIII	PF04851.15	7e-07	1	1
ENSAPOP00000030458	DEAD	PF00270.29	3.8e-39	1	1
ENSAPOP00000014190	DEAD	PF00270.29	4.2e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000032716	-	1944	XM_022209033	ENSAPOP00000030458	561 (aa)	XP_022064725	UPI000B902DBB
ENSAPOT00000032723	-	1548	-	ENSAPOP00000014190	515 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000017113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000017113's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000017113	ddx56	72	30.027	ENSAPOG00000002796	-	55	30.027
ENSAPOG00000017113	ddx56	74	31.714	ENSAPOG00000008759	ddx52	52	31.714
ENSAPOG00000017113	ddx56	73	30.990	ENSAPOG00000002749	ddx5	63	30.713
ENSAPOG00000017113	ddx56	73	30.130	ENSAPOG00000017303	si:dkey-156n14.5	57	30.130
ENSAPOG00000017113	ddx56	77	31.250	ENSAPOG00000010961	ddx49	79	31.250
ENSAPOG00000017113	ddx56	70	30.105	ENSAPOG00000001712	ddx43	50	30.105
ENSAPOG00000017113	ddx56	75	30.508	ENSAPOG00000000991	ddx28	69	30.918
ENSAPOG00000017113	ddx56	76	30.227	ENSAPOG00000019022	ddx18	59	30.227
ENSAPOG00000017113	ddx56	75	30.491	ENSAPOG00000007695	ddx6	76	30.491
ENSAPOG00000017113	ddx56	74	33.508	ENSAPOG00000017645	ddx27	50	31.265
ENSAPOG00000017113	ddx56	68	50.847	ENSAPOG00000003166	ddx1	53	50.847
ENSAPOG00000017113	ddx56	74	30.105	ENSAPOG00000014829	ddx61	74	30.105
ENSAPOG00000017113	ddx56	79	32.432	ENSAPOG00000021751	ddx47	80	32.432
ENSAPOG00000017113	ddx56	74	30.311	ENSAPOG00000018223	DDX5	61	30.073

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000017113	ddx56	98	64.505	ENSG00000136271	DDX56	98	68.132	Homo_sapiens
ENSAPOG00000017113	ddx56	98	63.538	ENSAMEG00000017711	DDX56	98	63.538	Ailuropoda_melanoleuca
ENSAPOG00000017113	ddx56	99	72.983	ENSACIG00000013747	ddx56	99	86.885	Amphilophus_citrinellus
ENSAPOG00000017113	ddx56	87	98.566	ENSAOCG00000015447	-	87	98.566	Amphiprion_ocellaris
ENSAPOG00000017113	ddx56	89	98.603	ENSAOCG00000018059	ddx56	94	98.603	Amphiprion_ocellaris
ENSAPOG00000017113	ddx56	100	97.683	ENSAPEG00000007267	ddx56	100	97.683	Amphiprion_percula
ENSAPOG00000017113	ddx56	99	86.918	ENSATEG00000005279	ddx56	99	86.918	Anabas_testudineus
ENSAPOG00000017113	ddx56	100	86.453	ENSACLG00000020113	ddx56	100	86.453	Astatotilapia_calliptera
ENSAPOG00000017113	ddx56	99	77.379	ENSAMXG00000019357	ddx56	99	77.379	Astyanax_mexicanus
ENSAPOG00000017113	ddx56	99	64.337	ENSBTAG00000010602	DDX56	99	64.158	Bos_taurus
ENSAPOG00000017113	ddx56	97	40.714	WBGene00016073	C24H12.4	86	39.821	Caenorhabditis_elegans
ENSAPOG00000017113	ddx56	98	64.685	ENSCJAG00000012233	DDX56	98	64.324	Callithrix_jacchus
ENSAPOG00000017113	ddx56	81	61.135	ENSCAFG00000029295	DDX56	99	61.135	Canis_familiaris
ENSAPOG00000017113	ddx56	98	61.733	ENSCAFG00020019695	DDX56	98	61.552	Canis_lupus_dingo
ENSAPOG00000017113	ddx56	99	64.158	ENSCHIG00000014261	DDX56	99	63.978	Capra_hircus
ENSAPOG00000017113	ddx56	98	64.079	ENSTSYG00000008048	DDX56	98	64.260	Carlito_syrichta
ENSAPOG00000017113	ddx56	86	63.617	ENSCAPG00000006286	DDX56	98	63.202	Cavia_aperea
ENSAPOG00000017113	ddx56	99	64.695	ENSCPOG00000003359	DDX56	99	64.516	Cavia_porcellus
ENSAPOG00000017113	ddx56	98	63.423	ENSCCAG00000025303	DDX56	98	63.489	Cebus_capucinus
ENSAPOG00000017113	ddx56	97	65.589	ENSCATG00000039389	DDX56	98	63.815	Cercocebus_atys
ENSAPOG00000017113	ddx56	98	64.728	ENSCLAG00000007666	DDX56	98	64.728	Chinchilla_lanigera
ENSAPOG00000017113	ddx56	98	64.452	ENSCSAG00000015636	DDX56	98	64.093	Chlorocebus_sabaeus
ENSAPOG00000017113	ddx56	98	69.691	ENSCPBG00000024556	DDX56	97	69.510	Chrysemys_picta_bellii
ENSAPOG00000017113	ddx56	93	60.039	ENSCING00000005185	-	98	61.569	Ciona_intestinalis
ENSAPOG00000017113	ddx56	91	59.319	ENSCSAVG00000011266	-	99	61.122	Ciona_savignyi
ENSAPOG00000017113	ddx56	98	64.452	ENSCANG00000028187	DDX56	98	64.273	Colobus_angolensis_palliatus
ENSAPOG00000017113	ddx56	98	64.674	ENSCGRG00001019019	Ddx56	98	64.312	Cricetulus_griseus_chok1gshd
ENSAPOG00000017113	ddx56	98	64.674	ENSCGRG00000011870	Ddx56	98	64.312	Cricetulus_griseus_crigri
ENSAPOG00000017113	ddx56	100	84.520	ENSCSEG00000008368	ddx56	100	85.231	Cynoglossus_semilaevis
ENSAPOG00000017113	ddx56	100	85.740	ENSCVAG00000006499	ddx56	100	85.740	Cyprinodon_variegatus
ENSAPOG00000017113	ddx56	99	80.536	ENSDARG00000020913	ddx56	99	80.714	Danio_rerio
ENSAPOG00000017113	ddx56	85	63.420	ENSDNOG00000036526	DDX56	96	63.420	Dasypus_novemcinctus
ENSAPOG00000017113	ddx56	98	51.521	FBgn0001565	Hlc	98	49.911	Drosophila_melanogaster
ENSAPOG00000017113	ddx56	65	75.000	ENSETEG00000002969	-	64	75.000	Echinops_telfairi
ENSAPOG00000017113	ddx56	88	43.617	ENSETEG00000019559	-	99	43.958	Echinops_telfairi
ENSAPOG00000017113	ddx56	98	65.704	ENSEBUG00000009986	ddx56	99	65.704	Eptatretus_burgeri
ENSAPOG00000017113	ddx56	98	63.357	ENSEASG00005017795	DDX56	98	63.718	Equus_asinus_asinus
ENSAPOG00000017113	ddx56	98	63.177	ENSECAG00000019897	DDX56	98	63.538	Equus_caballus
ENSAPOG00000017113	ddx56	84	63.478	ENSEEUG00000004849	DDX56	98	63.478	Erinaceus_europaeus
ENSAPOG00000017113	ddx56	100	83.779	ENSELUG00000004150	ddx56	100	83.779	Esox_lucius
ENSAPOG00000017113	ddx56	98	63.177	ENSFCAG00000010261	DDX56	98	62.996	Felis_catus
ENSAPOG00000017113	ddx56	98	63.899	ENSFDAG00000007128	DDX56	98	63.718	Fukomys_damarensis
ENSAPOG00000017113	ddx56	100	81.818	ENSFHEG00000018008	ddx56	96	89.200	Fundulus_heteroclitus
ENSAPOG00000017113	ddx56	100	77.224	ENSGAFG00000006906	ddx56	99	77.224	Gambusia_affinis
ENSAPOG00000017113	ddx56	97	69.790	ENSGAGG00000006789	DDX56	97	68.116	Gopherus_agassizii
ENSAPOG00000017113	ddx56	98	64.505	ENSGGOG00000012031	DDX56	98	64.144	Gorilla_gorilla
ENSAPOG00000017113	ddx56	99	77.799	ENSHBUG00000015246	ddx56	96	81.273	Haplochromis_burtoni
ENSAPOG00000017113	ddx56	98	63.364	ENSHGLG00000017271	DDX56	98	62.816	Heterocephalus_glaber_female
ENSAPOG00000017113	ddx56	98	63.364	ENSHGLG00100015731	DDX56	98	62.816	Heterocephalus_glaber_male
ENSAPOG00000017113	ddx56	100	83.126	ENSHCOG00000001685	ddx56	100	82.416	Hippocampus_comes
ENSAPOG00000017113	ddx56	99	77.580	ENSIPUG00000006602	ddx56	97	77.758	Ictalurus_punctatus
ENSAPOG00000017113	ddx56	97	65.333	ENSSTOG00000000464	DDX56	98	63.718	Ictidomys_tridecemlineatus
ENSAPOG00000017113	ddx56	98	64.972	ENSJJAG00000014269	Ddx56	99	64.440	Jaculus_jaculus
ENSAPOG00000017113	ddx56	99	85.893	ENSKMAG00000016611	ddx56	99	85.536	Kryptolebias_marmoratus
ENSAPOG00000017113	ddx56	99	89.088	ENSLBEG00000026281	ddx56	100	89.088	Labrus_bergylta
ENSAPOG00000017113	ddx56	98	73.333	ENSLACG00000015551	DDX56	97	73.429	Latimeria_chalumnae
ENSAPOG00000017113	ddx56	100	77.699	ENSLOCG00000015185	ddx56	100	77.699	Lepisosteus_oculatus
ENSAPOG00000017113	ddx56	99	64.758	ENSLAFG00000018206	DDX56	99	64.401	Loxodonta_africana
ENSAPOG00000017113	ddx56	97	65.589	ENSMFAG00000041001	DDX56	96	65.589	Macaca_fascicularis
ENSAPOG00000017113	ddx56	97	65.589	ENSMMUG00000002645	DDX56	96	65.589	Macaca_mulatta
ENSAPOG00000017113	ddx56	97	65.779	ENSMNEG00000028492	DDX56	96	65.779	Macaca_nemestrina
ENSAPOG00000017113	ddx56	97	65.399	ENSMLEG00000043591	DDX56	98	63.784	Mandrillus_leucophaeus
ENSAPOG00000017113	ddx56	100	87.011	ENSMAMG00000007776	ddx56	100	87.189	Mastacembelus_armatus
ENSAPOG00000017113	ddx56	100	86.453	ENSMZEG00005009813	ddx56	100	86.453	Maylandia_zebra
ENSAPOG00000017113	ddx56	98	64.855	ENSMICG00000005550	DDX56	98	64.493	Microcebus_murinus
ENSAPOG00000017113	ddx56	98	62.996	ENSMOCG00000016782	Ddx56	98	62.635	Microtus_ochrogaster
ENSAPOG00000017113	ddx56	100	84.369	ENSMMOG00000009654	ddx56	100	84.547	Mola_mola
ENSAPOG00000017113	ddx56	98	59.677	ENSMODG00000016137	DDX56	98	59.319	Monodelphis_domestica
ENSAPOG00000017113	ddx56	69	84.384	ENSMALG00000016910	ddx56	99	84.384	Monopterus_albus
ENSAPOG00000017113	ddx56	98	64.205	MGP_CAROLIEiJ_G0016069	Ddx56	98	66.935	Mus_caroli
ENSAPOG00000017113	ddx56	98	63.357	ENSMUSG00000004393	Ddx56	98	67.339	Mus_musculus
ENSAPOG00000017113	ddx56	98	64.773	MGP_PahariEiJ_G0016822	Ddx56	98	66.935	Mus_pahari
ENSAPOG00000017113	ddx56	98	63.357	MGP_SPRETEiJ_G0016911	Ddx56	98	67.339	Mus_spretus
ENSAPOG00000017113	ddx56	97	64.436	ENSMPUG00000018196	DDX56	85	64.436	Mustela_putorius_furo
ENSAPOG00000017113	ddx56	98	63.177	ENSMLUG00000003509	DDX56	98	62.996	Myotis_lucifugus
ENSAPOG00000017113	ddx56	98	64.621	ENSNGAG00000018785	Ddx56	98	64.260	Nannospalax_galili
ENSAPOG00000017113	ddx56	99	82.718	ENSNBRG00000002656	ddx56	97	82.718	Neolamprologus_brichardi
ENSAPOG00000017113	ddx56	98	64.865	ENSNLEG00000003816	DDX56	98	64.505	Nomascus_leucogenys
ENSAPOG00000017113	ddx56	92	60.324	ENSMEUG00000006788	DDX56	99	60.679	Notamacropus_eugenii
ENSAPOG00000017113	ddx56	98	63.043	ENSOPRG00000000292	-	98	63.225	Ochotona_princeps
ENSAPOG00000017113	ddx56	69	66.307	ENSODEG00000014807	DDX56	99	66.307	Octodon_degus
ENSAPOG00000017113	ddx56	100	82.888	ENSONIG00000011509	ddx56	99	82.888	Oreochromis_niloticus
ENSAPOG00000017113	ddx56	92	59.544	ENSOANG00000006320	-	99	55.741	Ornithorhynchus_anatinus
ENSAPOG00000017113	ddx56	74	59.173	ENSOANG00000015987	-	94	59.173	Ornithorhynchus_anatinus
ENSAPOG00000017113	ddx56	98	64.419	ENSOCUG00000022918	DDX56	98	64.557	Oryctolagus_cuniculus
ENSAPOG00000017113	ddx56	100	85.383	ENSORLG00000001434	ddx56	100	85.205	Oryzias_latipes
ENSAPOG00000017113	ddx56	100	85.027	ENSORLG00020015718	ddx56	97	84.848	Oryzias_latipes_hni
ENSAPOG00000017113	ddx56	99	85.357	ENSORLG00015003004	ddx56	96	85.179	Oryzias_latipes_hsok
ENSAPOG00000017113	ddx56	100	85.383	ENSOMEG00000022072	ddx56	99	85.205	Oryzias_melastigma
ENSAPOG00000017113	ddx56	98	63.899	ENSOGAG00000009981	DDX56	98	63.899	Otolemur_garnettii
ENSAPOG00000017113	ddx56	99	64.337	ENSOARG00000015240	DDX56	99	64.158	Ovis_aries
ENSAPOG00000017113	ddx56	98	61.879	ENSPPAG00000029147	DDX56	98	61.525	Pan_paniscus
ENSAPOG00000017113	ddx56	97	55.728	ENSPPAG00000031263	-	96	55.728	Pan_paniscus
ENSAPOG00000017113	ddx56	98	63.357	ENSPPRG00000014594	DDX56	98	62.996	Panthera_pardus
ENSAPOG00000017113	ddx56	95	51.955	ENSPTIG00000019500	DDX56	90	60.752	Panthera_tigris_altaica
ENSAPOG00000017113	ddx56	98	64.505	ENSPTRG00000019147	DDX56	98	64.144	Pan_troglodytes
ENSAPOG00000017113	ddx56	91	55.031	ENSPTRG00000052765	-	97	56.468	Pan_troglodytes
ENSAPOG00000017113	ddx56	97	65.209	ENSPANG00000002446	DDX56	98	63.243	Papio_anubis
ENSAPOG00000017113	ddx56	99	79.279	ENSPKIG00000018998	ddx56	98	78.559	Paramormyrops_kingsleyae
ENSAPOG00000017113	ddx56	99	82.739	ENSPMGG00000017421	ddx56	99	85.019	Periophthalmus_magnuspinnatus
ENSAPOG00000017113	ddx56	99	66.187	ENSPCIG00000009336	DDX56	98	66.007	Phascolarctos_cinereus
ENSAPOG00000017113	ddx56	100	84.848	ENSPFOG00000018658	ddx56	100	85.561	Poecilia_formosa
ENSAPOG00000017113	ddx56	100	85.027	ENSPLAG00000019208	ddx56	100	85.740	Poecilia_latipinna
ENSAPOG00000017113	ddx56	100	85.027	ENSPMEG00000001775	ddx56	100	85.740	Poecilia_mexicana
ENSAPOG00000017113	ddx56	100	85.740	ENSPREG00000015142	ddx56	100	85.740	Poecilia_reticulata
ENSAPOG00000017113	ddx56	98	64.505	ENSPPYG00000017591	DDX56	98	64.144	Pongo_abelii
ENSAPOG00000017113	ddx56	95	65.000	ENSPCAG00000011499	DDX56	99	64.630	Procavia_capensis
ENSAPOG00000017113	ddx56	98	64.801	ENSPCOG00000024864	DDX56	98	64.440	Propithecus_coquereli
ENSAPOG00000017113	ddx56	88	68.720	ENSPVAG00000000791	DDX56	88	68.720	Pteropus_vampyrus
ENSAPOG00000017113	ddx56	100	86.275	ENSPNYG00000019212	ddx56	100	86.275	Pundamilia_nyererei
ENSAPOG00000017113	ddx56	99	81.475	ENSPNAG00000025446	ddx56	99	81.475	Pygocentrus_nattereri
ENSAPOG00000017113	ddx56	98	63.899	ENSRNOG00000004670	Ddx56	98	63.718	Rattus_norvegicus
ENSAPOG00000017113	ddx56	98	64.452	ENSRBIG00000030140	DDX56	98	64.093	Rhinopithecus_bieti
ENSAPOG00000017113	ddx56	98	64.273	ENSRROG00000044428	DDX56	98	63.914	Rhinopithecus_roxellana
ENSAPOG00000017113	ddx56	96	42.564	YLR276C	-	97	43.761	Saccharomyces_cerevisiae
ENSAPOG00000017113	ddx56	98	64.144	ENSSBOG00000034339	DDX56	98	63.784	Saimiri_boliviensis_boliviensis
ENSAPOG00000017113	ddx56	86	64.682	ENSSHAG00000016615	DDX56	99	64.271	Sarcophilus_harrisii
ENSAPOG00000017113	ddx56	100	78.863	ENSSFOG00015012795	ddx56	100	78.863	Scleropages_formosus
ENSAPOG00000017113	ddx56	100	89.165	ENSSMAG00000011280	ddx56	99	91.231	Scophthalmus_maximus
ENSAPOG00000017113	ddx56	100	92.349	ENSSDUG00000023597	ddx56	100	92.527	Seriola_dumerili
ENSAPOG00000017113	ddx56	100	92.171	ENSSLDG00000018369	ddx56	100	92.349	Seriola_lalandi_dorsalis
ENSAPOG00000017113	ddx56	70	77.586	ENSSARG00000014363	DDX56	78	72.464	Sorex_araneus
ENSAPOG00000017113	ddx56	100	70.390	ENSSPUG00000000784	DDX56	97	70.213	Sphenodon_punctatus
ENSAPOG00000017113	ddx56	95	96.629	ENSSPAG00000009392	ddx56	99	96.629	Stegastes_partitus
ENSAPOG00000017113	ddx56	99	63.082	ENSSSCG00000016745	DDX56	99	63.489	Sus_scrofa
ENSAPOG00000017113	ddx56	100	86.170	ENSTRUG00000018623	ddx56	100	86.170	Takifugu_rubripes
ENSAPOG00000017113	ddx56	99	85.487	ENSTNIG00000013593	ddx56	100	85.487	Tetraodon_nigroviridis
ENSAPOG00000017113	ddx56	99	63.993	ENSTBEG00000007119	DDX56	98	63.964	Tupaia_belangeri
ENSAPOG00000017113	ddx56	86	61.728	ENSTTRG00000010552	DDX56	98	61.523	Tursiops_truncatus
ENSAPOG00000017113	ddx56	98	63.718	ENSUAMG00000014194	DDX56	98	63.538	Ursus_americanus
ENSAPOG00000017113	ddx56	98	63.718	ENSUMAG00000009666	DDX56	98	63.538	Ursus_maritimus
ENSAPOG00000017113	ddx56	98	62.455	ENSVVUG00000011905	DDX56	98	62.455	Vulpes_vulpes
ENSAPOG00000017113	ddx56	99	72.302	ENSXETG00000019000	ddx56	99	72.302	Xenopus_tropicalis
ENSAPOG00000017113	ddx56	97	85.098	ENSXCOG00000017413	ddx56	96	85.098	Xiphophorus_couchianus
ENSAPOG00000017113	ddx56	100	85.205	ENSXMAG00000018749	ddx56	100	85.205	Xiphophorus_maculatus