EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000017310 (Gene tree)
Gene ID: 110952039
Gene Symbol: RNPS1
Alias: wu:fa19a11|zgc:65775
Full Name: RNA-binding protein with serine-rich domain 1-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 9844 bases
Position: chrMVNR01000222.1:633620-643463
Accession: 110952039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000014437	RRM_1	PF00076.22	6.2e-17	1	1
ENSAPOP00000014428	RRM_1	PF00076.22	6.4e-17	1	1
ENSAPOP00000030611	RRM_1	PF00076.22	6.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000032818	RNPS1-203	957	-	ENSAPOP00000030611	318 (aa)	-	-
ENSAPOT00000022835	RNPS1-201	1343	-	ENSAPOP00000014437	308 (aa)	-	-
ENSAPOT00000022845	RNPS1-202	2229	XM_022195360	ENSAPOP00000014428	318 (aa)	XP_022051052	UPI000B8FE19B

Gene Model

Click here to download ENSAPOG00000017310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000017310's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000017310	RNPS1	74	63.913	ENSAPOG00000014649	-	83	76.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000017310	RNPS1	69	81.221	ENSACIG00000014367	-	77	71.362	Amphilophus_citrinellus
ENSAPOG00000017310	RNPS1	90	98.208	ENSAOCG00000002404	RNPS1	100	98.214	Amphiprion_ocellaris
ENSAPOG00000017310	RNPS1	91	97.193	ENSAPEG00000006497	RNPS1	99	97.193	Amphiprion_percula
ENSAPOG00000017310	RNPS1	70	61.751	ENSATEG00000000835	RNPS1	90	65.421	Anabas_testudineus
ENSAPOG00000017310	RNPS1	74	81.739	ENSATEG00000024267	RNPS1	83	83.550	Anabas_testudineus
ENSAPOG00000017310	RNPS1	74	89.035	ENSACLG00000025942	RNPS1	82	89.083	Astatotilapia_calliptera
ENSAPOG00000017310	RNPS1	75	63.090	ENSACLG00000021537	-	88	72.961	Astatotilapia_calliptera
ENSAPOG00000017310	RNPS1	75	76.395	ENSAMXG00000006330	-	82	74.459	Astyanax_mexicanus
ENSAPOG00000017310	RNPS1	63	63.366	ENSCCAG00000034480	RNPS1	85	65.417	Cebus_capucinus
ENSAPOG00000017310	RNPS1	84	62.030	ENSCATG00000042361	-	80	62.343	Cercocebus_atys
ENSAPOG00000017310	RNPS1	87	70.545	ENSCSAG00000005219	-	81	64.730	Chlorocebus_sabaeus
ENSAPOG00000017310	RNPS1	69	50.467	ENSCPBG00000000214	RNPS1	56	80.342	Chrysemys_picta_bellii
ENSAPOG00000017310	RNPS1	55	57.143	ENSCING00000016317	-	81	57.692	Ciona_intestinalis
ENSAPOG00000017310	RNPS1	66	65.438	ENSCGRG00000014021	Rnps1	77	64.352	Cricetulus_griseus_crigri
ENSAPOG00000017310	RNPS1	76	73.729	ENSCSEG00000015997	RNPS1	83	82.203	Cynoglossus_semilaevis
ENSAPOG00000017310	RNPS1	74	68.831	ENSCSEG00000000402	RNPS1	76	76.190	Cynoglossus_semilaevis
ENSAPOG00000017310	RNPS1	72	76.577	ENSCVAG00000010868	RNPS1	77	80.930	Cyprinodon_variegatus
ENSAPOG00000017310	RNPS1	74	72.532	ENSDARG00000100188	RNPS1	83	75.641	Danio_rerio
ENSAPOG00000017310	RNPS1	74	72.532	ENSDARG00000116743	rnps1	83	75.641	Danio_rerio
ENSAPOG00000017310	RNPS1	68	74.286	ENSELUG00000015003	RNPS1	75	71.429	Esox_lucius
ENSAPOG00000017310	RNPS1	69	76.744	ENSFHEG00000011705	RNPS1	77	78.704	Fundulus_heteroclitus
ENSAPOG00000017310	RNPS1	69	77.103	ENSGAFG00000005457	RNPS1	77	80.000	Gambusia_affinis
ENSAPOG00000017310	RNPS1	74	75.758	ENSGACG00000011261	RNPS1	83	78.448	Gasterosteus_aculeatus
ENSAPOG00000017310	RNPS1	74	65.217	ENSGACG00000005641	-	82	68.398	Gasterosteus_aculeatus
ENSAPOG00000017310	RNPS1	65	63.285	ENSGGOG00000026421	-	79	62.319	Gorilla_gorilla
ENSAPOG00000017310	RNPS1	74	63.636	ENSHBUG00000017337	-	83	63.793	Haplochromis_burtoni
ENSAPOG00000017310	RNPS1	74	88.596	ENSHBUG00000002494	RNPS1	82	88.646	Haplochromis_burtoni
ENSAPOG00000017310	RNPS1	76	64.135	ENSHGLG00100001721	-	78	63.136	Heterocephalus_glaber_male
ENSAPOG00000017310	RNPS1	74	69.787	ENSHCOG00000004424	RNPS1	83	69.915	Hippocampus_comes
ENSAPOG00000017310	RNPS1	76	67.094	ENSJJAG00000019234	-	68	67.094	Jaculus_jaculus
ENSAPOG00000017310	RNPS1	74	75.983	ENSKMAG00000009135	RNPS1	82	76.087	Kryptolebias_marmoratus
ENSAPOG00000017310	RNPS1	68	75.598	ENSLBEG00000024091	RNPS1	77	75.117	Labrus_bergylta
ENSAPOG00000017310	RNPS1	76	64.050	ENSMFAG00000044121	-	84	61.826	Macaca_fascicularis
ENSAPOG00000017310	RNPS1	78	65.992	ENSMMUG00000041726	-	85	62.656	Macaca_mulatta
ENSAPOG00000017310	RNPS1	78	65.992	ENSMNEG00000024827	-	85	62.656	Macaca_nemestrina
ENSAPOG00000017310	RNPS1	65	64.251	ENSMLEG00000040232	-	81	60.386	Mandrillus_leucophaeus
ENSAPOG00000017310	RNPS1	77	73.640	ENSMAMG00000021148	-	84	65.833	Mastacembelus_armatus
ENSAPOG00000017310	RNPS1	74	81.304	ENSMAMG00000021609	-	83	83.117	Mastacembelus_armatus
ENSAPOG00000017310	RNPS1	74	63.478	ENSMZEG00005006256	-	83	64.069	Maylandia_zebra
ENSAPOG00000017310	RNPS1	74	89.035	ENSMZEG00005012742	RNPS1	82	89.083	Maylandia_zebra
ENSAPOG00000017310	RNPS1	69	72.038	ENSMMOG00000010863	RNPS1	77	75.117	Mola_mola
ENSAPOG00000017310	RNPS1	76	62.397	ENSMODG00000015891	RNPS1	75	79.487	Monodelphis_domestica
ENSAPOG00000017310	RNPS1	69	69.953	ENSNBRG00000023437	RNPS1	77	73.239	Neolamprologus_brichardi
ENSAPOG00000017310	RNPS1	74	63.478	ENSNBRG00000014540	-	91	69.478	Neolamprologus_brichardi
ENSAPOG00000017310	RNPS1	79	65.462	ENSNLEG00000009243	RNPS1	98	63.934	Nomascus_leucogenys
ENSAPOG00000017310	RNPS1	53	55.689	ENSODEG00000002513	-	52	51.261	Octodon_degus
ENSAPOG00000017310	RNPS1	74	63.478	ENSONIG00000019627	-	83	73.593	Oreochromis_niloticus
ENSAPOG00000017310	RNPS1	74	73.684	ENSORLG00000008033	RNPS1	94	75.490	Oryzias_latipes
ENSAPOG00000017310	RNPS1	74	75.983	ENSORLG00020020207	RNPS1	82	73.362	Oryzias_latipes_hni
ENSAPOG00000017310	RNPS1	74	75.546	ENSORLG00015000305	-	82	72.926	Oryzias_latipes_hsok
ENSAPOG00000017310	RNPS1	71	56.379	ENSORLG00015011183	RNPS1	71	74.779	Oryzias_latipes_hsok
ENSAPOG00000017310	RNPS1	63	58.654	ENSPPAG00000011845	RNPS1	86	60.417	Pan_paniscus
ENSAPOG00000017310	RNPS1	63	48.500	ENSPANG00000033576	-	74	45.226	Papio_anubis
ENSAPOG00000017310	RNPS1	74	72.650	ENSPKIG00000023465	RNPS1	83	68.085	Paramormyrops_kingsleyae
ENSAPOG00000017310	RNPS1	61	68.085	ENSPMGG00000015888	-	77	73.364	Periophthalmus_magnuspinnatus
ENSAPOG00000017310	RNPS1	74	62.241	ENSPCIG00000025012	RNPS1	85	65.833	Phascolarctos_cinereus
ENSAPOG00000017310	RNPS1	51	67.485	ENSPCIG00000016114	-	60	77.419	Phascolarctos_cinereus
ENSAPOG00000017310	RNPS1	69	78.037	ENSPFOG00000009978	RNPS1	77	80.930	Poecilia_formosa
ENSAPOG00000017310	RNPS1	69	78.037	ENSPLAG00000009343	RNPS1	77	80.930	Poecilia_latipinna
ENSAPOG00000017310	RNPS1	72	76.126	ENSPMEG00000008552	RNPS1	77	80.930	Poecilia_mexicana
ENSAPOG00000017310	RNPS1	69	78.037	ENSPREG00000001843	RNPS1	77	80.930	Poecilia_reticulata
ENSAPOG00000017310	RNPS1	74	89.035	ENSPNYG00000000585	RNPS1	82	89.083	Pundamilia_nyererei
ENSAPOG00000017310	RNPS1	74	77.489	ENSPNAG00000025479	RNPS1	82	68.966	Pygocentrus_nattereri
ENSAPOG00000017310	RNPS1	76	74.167	ENSSFOG00015019341	-	78	68.699	Scleropages_formosus
ENSAPOG00000017310	RNPS1	74	73.932	ENSSFOG00015022746	RNPS1	85	70.638	Scleropages_formosus
ENSAPOG00000017310	RNPS1	72	89.956	ENSSMAG00000016933	RNPS1	82	84.279	Scophthalmus_maximus
ENSAPOG00000017310	RNPS1	74	81.304	ENSSDUG00000011453	RNPS1	83	83.117	Seriola_dumerili
ENSAPOG00000017310	RNPS1	74	65.368	ENSSDUG00000006433	-	76	77.489	Seriola_dumerili
ENSAPOG00000017310	RNPS1	72	92.793	ENSSLDG00000021341	RNPS1	81	92.793	Seriola_lalandi_dorsalis
ENSAPOG00000017310	RNPS1	90	97.491	ENSSPAG00000009383	RNPS1	100	97.500	Stegastes_partitus
ENSAPOG00000017310	RNPS1	74	76.293	ENSTRUG00000008602	RNPS1	83	78.541	Takifugu_rubripes
ENSAPOG00000017310	RNPS1	75	78.632	ENSTNIG00000009753	RNPS1	82	80.769	Tetraodon_nigroviridis
ENSAPOG00000017310	RNPS1	74	63.248	ENSXETG00000024439	rnps1	69	71.495	Xenopus_tropicalis
ENSAPOG00000017310	RNPS1	74	75.109	ENSXMAG00000004827	RNPS1	82	75.217	Xiphophorus_maculatus