EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000017371 (Gene tree)
Gene ID: 110970424
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 24941 bases
Position: chrMVNR01000048.1:1070352-1095292
Accession: 110970424
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000030658	RRM_1	PF00076.22	7.9e-15	1	2
ENSAPOP00000030658	RRM_1	PF00076.22	7.9e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000022913	-	1983	XM_022220710	ENSAPOP00000030658	503 (aa)	XP_022076402	UPI000B90363A

Gene Model

Click here to download ENSAPOG00000017371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000017371's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000017371	rnpc3	97	56.970	ENSG00000185946	RNPC3	100	55.797	Homo_sapiens
ENSAPOG00000017371	rnpc3	97	56.338	ENSAMEG00000001694	RNPC3	95	56.338	Ailuropoda_melanoleuca
ENSAPOG00000017371	rnpc3	99	79.608	ENSACIG00000021043	rnpc3	99	79.804	Amphilophus_citrinellus
ENSAPOG00000017371	rnpc3	100	96.863	ENSAOCG00000014052	rnpc3	98	96.863	Amphiprion_ocellaris
ENSAPOG00000017371	rnpc3	100	96.863	ENSAPEG00000008739	rnpc3	98	96.863	Amphiprion_percula
ENSAPOG00000017371	rnpc3	100	81.589	ENSATEG00000021263	rnpc3	100	81.589	Anabas_testudineus
ENSAPOG00000017371	rnpc3	89	54.945	ENSAPLG00000015605	RNPC3	99	56.703	Anas_platyrhynchos
ENSAPOG00000017371	rnpc3	96	56.701	ENSACAG00000002029	RNPC3	96	54.949	Anolis_carolinensis
ENSAPOG00000017371	rnpc3	97	56.653	ENSANAG00000019950	RNPC3	95	56.653	Aotus_nancymaae
ENSAPOG00000017371	rnpc3	99	86.028	ENSACLG00000014702	rnpc3	99	86.028	Astatotilapia_calliptera
ENSAPOG00000017371	rnpc3	99	67.451	ENSAMXG00000033372	rnpc3	99	67.451	Astyanax_mexicanus
ENSAPOG00000017371	rnpc3	97	56.970	ENSBTAG00000019091	RNPC3	95	56.970	Bos_taurus
ENSAPOG00000017371	rnpc3	97	56.048	ENSCJAG00000035686	RNPC3	95	56.048	Callithrix_jacchus
ENSAPOG00000017371	rnpc3	97	56.452	ENSCAFG00000019972	RNPC3	95	56.452	Canis_familiaris
ENSAPOG00000017371	rnpc3	97	56.452	ENSCAFG00020011300	RNPC3	95	56.452	Canis_lupus_dingo
ENSAPOG00000017371	rnpc3	97	57.344	ENSCHIG00000020361	RNPC3	95	56.855	Capra_hircus
ENSAPOG00000017371	rnpc3	97	56.162	ENSTSYG00000030256	RNPC3	95	56.162	Carlito_syrichta
ENSAPOG00000017371	rnpc3	86	46.818	ENSCAPG00000013600	RNPC3	97	47.005	Cavia_aperea
ENSAPOG00000017371	rnpc3	97	55.040	ENSCPOG00000031638	RNPC3	95	55.040	Cavia_porcellus
ENSAPOG00000017371	rnpc3	97	56.452	ENSCCAG00000024301	RNPC3	95	56.452	Cebus_capucinus
ENSAPOG00000017371	rnpc3	97	57.056	ENSCATG00000002086	RNPC3	95	57.056	Cercocebus_atys
ENSAPOG00000017371	rnpc3	97	46.667	ENSCATG00000035930	-	52	53.719	Cercocebus_atys
ENSAPOG00000017371	rnpc3	97	55.040	ENSCLAG00000005169	RNPC3	95	54.839	Chinchilla_lanigera
ENSAPOG00000017371	rnpc3	97	56.855	ENSCSAG00000001519	RNPC3	95	56.855	Chlorocebus_sabaeus
ENSAPOG00000017371	rnpc3	98	55.734	ENSCPBG00000028311	RNPC3	96	57.715	Chrysemys_picta_bellii
ENSAPOG00000017371	rnpc3	95	35.744	ENSCSAVG00000002800	-	76	54.615	Ciona_savignyi
ENSAPOG00000017371	rnpc3	97	56.452	ENSCANG00000031444	RNPC3	95	56.452	Colobus_angolensis_palliatus
ENSAPOG00000017371	rnpc3	96	56.592	ENSCGRG00001019276	Rnpc3	95	56.592	Cricetulus_griseus_chok1gshd
ENSAPOG00000017371	rnpc3	89	54.066	ENSCGRG00000000053	Rnpc3	99	54.066	Cricetulus_griseus_crigri
ENSAPOG00000017371	rnpc3	99	76.984	ENSCSEG00000013475	rnpc3	99	76.984	Cynoglossus_semilaevis
ENSAPOG00000017371	rnpc3	100	81.712	ENSCVAG00000002645	rnpc3	100	81.712	Cyprinodon_variegatus
ENSAPOG00000017371	rnpc3	99	66.601	ENSDARG00000011247	rnpc3	98	67.191	Danio_rerio
ENSAPOG00000017371	rnpc3	97	56.768	ENSDNOG00000044555	-	95	56.768	Dasypus_novemcinctus
ENSAPOG00000017371	rnpc3	97	57.172	ENSDNOG00000047498	-	95	57.172	Dasypus_novemcinctus
ENSAPOG00000017371	rnpc3	97	55.894	ENSDORG00000027343	Rnpc3	95	55.894	Dipodomys_ordii
ENSAPOG00000017371	rnpc3	100	50.383	ENSEBUG00000002068	rnpc3	99	50.194	Eptatretus_burgeri
ENSAPOG00000017371	rnpc3	97	57.172	ENSEASG00005015957	RNPC3	95	57.172	Equus_asinus_asinus
ENSAPOG00000017371	rnpc3	97	57.374	ENSECAG00000021148	RNPC3	95	57.374	Equus_caballus
ENSAPOG00000017371	rnpc3	99	70.498	ENSELUG00000002264	rnpc3	99	68.260	Esox_lucius
ENSAPOG00000017371	rnpc3	97	56.539	ENSFCAG00000024312	RNPC3	95	56.539	Felis_catus
ENSAPOG00000017371	rnpc3	89	55.654	ENSFALG00000002580	RNPC3	99	57.619	Ficedula_albicollis
ENSAPOG00000017371	rnpc3	97	56.048	ENSFDAG00000019948	RNPC3	95	56.048	Fukomys_damarensis
ENSAPOG00000017371	rnpc3	100	75.198	ENSFHEG00000020647	rnpc3	100	75.198	Fundulus_heteroclitus
ENSAPOG00000017371	rnpc3	100	70.809	ENSGMOG00000019213	rnpc3	99	70.553	Gadus_morhua
ENSAPOG00000017371	rnpc3	96	57.230	ENSGALG00000005162	RNPC3	88	56.646	Gallus_gallus
ENSAPOG00000017371	rnpc3	100	78.669	ENSGAFG00000017236	rnpc3	100	78.824	Gambusia_affinis
ENSAPOG00000017371	rnpc3	100	82.178	ENSGACG00000002048	rnpc3	98	83.366	Gasterosteus_aculeatus
ENSAPOG00000017371	rnpc3	97	56.911	ENSGAGG00000008438	RNPC3	94	58.130	Gopherus_agassizii
ENSAPOG00000017371	rnpc3	97	49.796	ENSGGOG00000026201	-	95	49.491	Gorilla_gorilla
ENSAPOG00000017371	rnpc3	82	81.250	ENSHBUG00000015966	rnpc3	85	83.106	Haplochromis_burtoni
ENSAPOG00000017371	rnpc3	97	55.847	ENSHGLG00000001708	RNPC3	95	55.847	Heterocephalus_glaber_female
ENSAPOG00000017371	rnpc3	97	55.847	ENSHGLG00100003005	RNPC3	95	55.847	Heterocephalus_glaber_male
ENSAPOG00000017371	rnpc3	99	76.786	ENSHCOG00000017135	rnpc3	100	76.786	Hippocampus_comes
ENSAPOG00000017371	rnpc3	99	64.811	ENSIPUG00000002916	rnpc3	99	65.490	Ictalurus_punctatus
ENSAPOG00000017371	rnpc3	97	56.048	ENSSTOG00000025020	RNPC3	95	56.048	Ictidomys_tridecemlineatus
ENSAPOG00000017371	rnpc3	96	56.237	ENSJJAG00000010203	Rnpc3	96	55.984	Jaculus_jaculus
ENSAPOG00000017371	rnpc3	99	81.800	ENSKMAG00000017358	rnpc3	99	81.400	Kryptolebias_marmoratus
ENSAPOG00000017371	rnpc3	100	83.826	ENSLBEG00000024901	rnpc3	98	83.826	Labrus_bergylta
ENSAPOG00000017371	rnpc3	99	60.119	ENSLACG00000005720	RNPC3	90	58.824	Latimeria_chalumnae
ENSAPOG00000017371	rnpc3	99	65.347	ENSLOCG00000007986	rnpc3	99	62.795	Lepisosteus_oculatus
ENSAPOG00000017371	rnpc3	97	57.287	ENSLAFG00000032342	RNPC3	95	57.258	Loxodonta_africana
ENSAPOG00000017371	rnpc3	97	44.807	ENSMFAG00000002917	-	95	43.967	Macaca_fascicularis
ENSAPOG00000017371	rnpc3	97	57.056	ENSMFAG00000002004	RNPC3	95	57.056	Macaca_fascicularis
ENSAPOG00000017371	rnpc3	80	54.717	ENSMMUG00000002098	-	85	54.717	Macaca_mulatta
ENSAPOG00000017371	rnpc3	97	56.855	ENSMMUG00000018039	RNPC3	95	56.855	Macaca_mulatta
ENSAPOG00000017371	rnpc3	97	53.831	ENSMNEG00000033950	RNPC3	95	53.831	Macaca_nemestrina
ENSAPOG00000017371	rnpc3	97	41.598	ENSMNEG00000029209	-	95	43.238	Macaca_nemestrina
ENSAPOG00000017371	rnpc3	97	57.056	ENSMLEG00000033628	RNPC3	95	57.056	Mandrillus_leucophaeus
ENSAPOG00000017371	rnpc3	97	45.908	ENSMLEG00000034644	-	95	45.365	Mandrillus_leucophaeus
ENSAPOG00000017371	rnpc3	100	74.168	ENSMAMG00000007496	rnpc3	100	74.168	Mastacembelus_armatus
ENSAPOG00000017371	rnpc3	99	84.990	ENSMZEG00005020233	rnpc3	99	84.990	Maylandia_zebra
ENSAPOG00000017371	rnpc3	89	54.945	ENSMGAG00000006381	RNPC3	99	55.385	Meleagris_gallopavo
ENSAPOG00000017371	rnpc3	97	56.883	ENSMAUG00000001358	Rnpc3	95	56.883	Mesocricetus_auratus
ENSAPOG00000017371	rnpc3	97	56.048	ENSMICG00000029591	RNPC3	95	56.048	Microcebus_murinus
ENSAPOG00000017371	rnpc3	97	56.970	ENSMOCG00000013423	Rnpc3	95	56.970	Microtus_ochrogaster
ENSAPOG00000017371	rnpc3	100	75.794	ENSMMOG00000005309	rnpc3	100	76.984	Mola_mola
ENSAPOG00000017371	rnpc3	97	56.795	ENSMODG00000002946	RNPC3	95	56.795	Monodelphis_domestica
ENSAPOG00000017371	rnpc3	99	78.235	ENSMALG00000015471	rnpc3	100	78.235	Monopterus_albus
ENSAPOG00000017371	rnpc3	97	56.389	MGP_CAROLIEiJ_G0025555	Rnpc3	96	56.389	Mus_caroli
ENSAPOG00000017371	rnpc3	97	56.566	ENSMUSG00000027981	Rnpc3	99	54.818	Mus_musculus
ENSAPOG00000017371	rnpc3	97	56.137	MGP_PahariEiJ_G0027001	Rnpc3	97	56.137	Mus_pahari
ENSAPOG00000017371	rnpc3	97	56.364	MGP_SPRETEiJ_G0026505	Rnpc3	96	56.364	Mus_spretus
ENSAPOG00000017371	rnpc3	97	56.619	ENSMPUG00000007349	RNPC3	95	56.619	Mustela_putorius_furo
ENSAPOG00000017371	rnpc3	97	56.024	ENSMLUG00000028743	RNPC3	95	56.024	Myotis_lucifugus
ENSAPOG00000017371	rnpc3	97	56.452	ENSNGAG00000010939	Rnpc3	95	56.452	Nannospalax_galili
ENSAPOG00000017371	rnpc3	99	86.228	ENSNBRG00000012196	rnpc3	96	86.228	Neolamprologus_brichardi
ENSAPOG00000017371	rnpc3	97	56.970	ENSNLEG00000012013	RNPC3	95	56.970	Nomascus_leucogenys
ENSAPOG00000017371	rnpc3	97	56.740	ENSODEG00000007612	RNPC3	95	55.040	Octodon_degus
ENSAPOG00000017371	rnpc3	99	85.010	ENSONIG00000004770	rnpc3	100	85.861	Oreochromis_niloticus
ENSAPOG00000017371	rnpc3	91	58.495	ENSOANG00000008220	RNPC3	99	58.495	Ornithorhynchus_anatinus
ENSAPOG00000017371	rnpc3	97	56.740	ENSOCUG00000004016	RNPC3	95	56.452	Oryctolagus_cuniculus
ENSAPOG00000017371	rnpc3	100	77.734	ENSORLG00000005694	rnpc3	100	77.734	Oryzias_latipes
ENSAPOG00000017371	rnpc3	100	77.734	ENSORLG00020005513	rnpc3	100	77.734	Oryzias_latipes_hni
ENSAPOG00000017371	rnpc3	100	77.336	ENSORLG00015002179	rnpc3	100	77.336	Oryzias_latipes_hsok
ENSAPOG00000017371	rnpc3	100	79.125	ENSOMEG00000017737	rnpc3	100	79.125	Oryzias_melastigma
ENSAPOG00000017371	rnpc3	97	57.258	ENSOGAG00000026182	RNPC3	95	57.258	Otolemur_garnettii
ENSAPOG00000017371	rnpc3	97	57.545	ENSOARG00000018719	RNPC3	95	57.056	Ovis_aries
ENSAPOG00000017371	rnpc3	98	50.503	ENSPPAG00000030278	-	97	50.503	Pan_paniscus
ENSAPOG00000017371	rnpc3	97	56.740	ENSPPAG00000037459	RNPC3	95	56.740	Pan_paniscus
ENSAPOG00000017371	rnpc3	97	56.740	ENSPPRG00000020246	RNPC3	95	56.740	Panthera_pardus
ENSAPOG00000017371	rnpc3	97	56.740	ENSPTIG00000009887	RNPC3	97	56.740	Panthera_tigris_altaica
ENSAPOG00000017371	rnpc3	97	56.653	ENSPTRG00000033902	RNPC3	95	56.653	Pan_troglodytes
ENSAPOG00000017371	rnpc3	98	49.798	ENSPTRG00000044227	-	97	49.595	Pan_troglodytes
ENSAPOG00000017371	rnpc3	97	47.379	ENSPANG00000029957	-	96	45.726	Papio_anubis
ENSAPOG00000017371	rnpc3	97	57.172	ENSPANG00000012137	RNPC3	95	57.172	Papio_anubis
ENSAPOG00000017371	rnpc3	99	66.471	ENSPKIG00000008828	rnpc3	99	64.118	Paramormyrops_kingsleyae
ENSAPOG00000017371	rnpc3	64	55.793	ENSPSIG00000007396	RNPC3	99	55.488	Pelodiscus_sinensis
ENSAPOG00000017371	rnpc3	99	65.753	ENSPMGG00000011742	rnpc3	100	65.949	Periophthalmus_magnuspinnatus
ENSAPOG00000017371	rnpc3	89	54.725	ENSPEMG00000020112	Rnpc3	99	54.725	Peromyscus_maniculatus_bairdii
ENSAPOG00000017371	rnpc3	96	42.509	ENSPMAG00000003778	rnpc3	96	45.315	Petromyzon_marinus
ENSAPOG00000017371	rnpc3	97	57.404	ENSPCIG00000004415	-	95	57.404	Phascolarctos_cinereus
ENSAPOG00000017371	rnpc3	99	80.594	ENSPFOG00000009895	rnpc3	99	80.792	Poecilia_formosa
ENSAPOG00000017371	rnpc3	99	80.792	ENSPLAG00000012023	rnpc3	99	80.990	Poecilia_latipinna
ENSAPOG00000017371	rnpc3	99	80.792	ENSPMEG00000003663	rnpc3	99	80.990	Poecilia_mexicana
ENSAPOG00000017371	rnpc3	100	79.528	ENSPREG00000010206	rnpc3	100	79.724	Poecilia_reticulata
ENSAPOG00000017371	rnpc3	81	52.530	ENSPPYG00000001102	RNPC3	94	52.530	Pongo_abelii
ENSAPOG00000017371	rnpc3	99	86.028	ENSPNYG00000020603	rnpc3	99	86.028	Pundamilia_nyererei
ENSAPOG00000017371	rnpc3	99	58.835	ENSPNAG00000000524	rnpc3	92	58.835	Pygocentrus_nattereri
ENSAPOG00000017371	rnpc3	97	56.619	ENSRNOG00000017310	Rnpc3	95	56.619	Rattus_norvegicus
ENSAPOG00000017371	rnpc3	97	53.320	ENSRBIG00000043897	RNPC3	95	53.320	Rhinopithecus_bieti
ENSAPOG00000017371	rnpc3	97	56.855	ENSRROG00000032334	RNPC3	95	56.855	Rhinopithecus_roxellana
ENSAPOG00000017371	rnpc3	97	56.566	ENSSBOG00000024473	RNPC3	95	56.566	Saimiri_boliviensis_boliviensis
ENSAPOG00000017371	rnpc3	97	57.287	ENSSHAG00000011859	RNPC3	95	56.487	Sarcophilus_harrisii
ENSAPOG00000017371	rnpc3	99	70.356	ENSSFOG00015013055	rnpc3	99	71.633	Scleropages_formosus
ENSAPOG00000017371	rnpc3	100	81.748	ENSSMAG00000020346	rnpc3	100	81.748	Scophthalmus_maximus
ENSAPOG00000017371	rnpc3	100	85.770	ENSSDUG00000006600	rnpc3	100	85.770	Seriola_dumerili
ENSAPOG00000017371	rnpc3	100	85.770	ENSSLDG00000007979	rnpc3	100	85.770	Seriola_lalandi_dorsalis
ENSAPOG00000017371	rnpc3	97	54.098	ENSSPUG00000003872	-	92	53.893	Sphenodon_punctatus
ENSAPOG00000017371	rnpc3	100	89.703	ENSSPAG00000005633	rnpc3	100	89.703	Stegastes_partitus
ENSAPOG00000017371	rnpc3	97	57.576	ENSSSCG00000037254	RNPC3	95	56.768	Sus_scrofa
ENSAPOG00000017371	rnpc3	89	57.333	ENSTGUG00000004795	-	99	57.333	Taeniopygia_guttata
ENSAPOG00000017371	rnpc3	99	78.571	ENSTNIG00000018963	rnpc3	100	78.571	Tetraodon_nigroviridis
ENSAPOG00000017371	rnpc3	97	56.452	ENSUMAG00000007775	RNPC3	97	56.452	Ursus_maritimus
ENSAPOG00000017371	rnpc3	97	56.452	ENSVVUG00000000331	RNPC3	95	56.452	Vulpes_vulpes
ENSAPOG00000017371	rnpc3	98	44.597	ENSXETG00000025027	rnpc3	98	43.750	Xenopus_tropicalis
ENSAPOG00000017371	rnpc3	53	83.019	ENSXCOG00000005013	rnpc3	100	79.102	Xiphophorus_couchianus
ENSAPOG00000017371	rnpc3	100	79.648	ENSXMAG00000006495	rnpc3	100	79.804	Xiphophorus_maculatus