EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000017395 (Gene tree)
Gene ID: 110953221
Gene Symbol: srsf5a
Alias: fb49e01|im:6906390|sfrs5|sfrs5a|wu:fb49e01|wu:fj09b12
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 7897 bases
Position: chrMVNR01000283.1:607251-615147
Accession: 110953221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000014507	RRM_1	PF00076.22	3.2e-33	1	2
ENSAPOP00000014507	RRM_1	PF00076.22	3.2e-33	2	2
ENSAPOP00000014507	RRM_3	PF08777.11	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000022949	-	2002	XM_022197105	ENSAPOP00000014507	296 (aa)	XP_022052797	UPI000B908C05

Gene Model

Click here to download ENSAPOG00000017395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000017395's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000017395	srsf5a	58	45.763	ENSAPOG00000008542	-	68	41.808
ENSAPOG00000017395	srsf5a	58	41.808	ENSAPOG00000002748	-	67	40.113
ENSAPOG00000017395	srsf5a	59	43.575	ENSAPOG00000013728	srsf9	75	37.949
ENSAPOG00000017395	srsf5a	63	71.658	ENSAPOG00000008642	srsf5b	63	70.109
ENSAPOG00000017395	srsf5a	61	67.222	ENSAPOG00000023399	-	75	53.070

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000017395	srsf5a	90	77.122	ENSACIG00000011892	srsf5a	98	87.500	Amphilophus_citrinellus
ENSAPOG00000017395	srsf5a	100	96.000	ENSAOCG00000014967	srsf5a	100	96.000	Amphiprion_ocellaris
ENSAPOG00000017395	srsf5a	100	95.667	ENSAPEG00000009297	srsf5a	100	95.667	Amphiprion_percula
ENSAPOG00000017395	srsf5a	79	93.671	ENSATEG00000000198	srsf5a	100	87.960	Anabas_testudineus
ENSAPOG00000017395	srsf5a	62	77.957	ENSAPLG00000002469	-	70	75.806	Anas_platyrhynchos
ENSAPOG00000017395	srsf5a	62	78.378	ENSACAG00000029015	-	68	75.000	Anolis_carolinensis
ENSAPOG00000017395	srsf5a	78	92.050	ENSACLG00000027166	srsf5a	100	87.789	Astatotilapia_calliptera
ENSAPOG00000017395	srsf5a	62	80.541	ENSCPBG00000021518	-	70	75.543	Chrysemys_picta_bellii
ENSAPOG00000017395	srsf5a	82	46.875	ENSCSAVG00000011376	-	78	56.633	Ciona_savignyi
ENSAPOG00000017395	srsf5a	79	89.300	ENSCSEG00000008109	srsf5a	77	89.627	Cynoglossus_semilaevis
ENSAPOG00000017395	srsf5a	77	79.583	ENSCVAG00000016982	srsf5a	97	76.119	Cyprinodon_variegatus
ENSAPOG00000017395	srsf5a	62	87.831	ENSDARG00000029818	srsf5a	100	84.962	Danio_rerio
ENSAPOG00000017395	srsf5a	62	81.865	ENSELUG00000020439	srsf5a	62	80.311	Esox_lucius
ENSAPOG00000017395	srsf5a	62	77.717	ENSFALG00000005098	-	64	76.087	Ficedula_albicollis
ENSAPOG00000017395	srsf5a	80	76.357	ENSFHEG00000003955	srsf5a	97	69.655	Fundulus_heteroclitus
ENSAPOG00000017395	srsf5a	62	89.674	ENSGMOG00000000869	srsf5a	94	86.413	Gadus_morhua
ENSAPOG00000017395	srsf5a	62	78.261	ENSGALG00000033259	SRSF5A	63	75.543	Gallus_gallus
ENSAPOG00000017395	srsf5a	80	73.770	ENSGAFG00000018237	srsf5a	74	63.900	Gambusia_affinis
ENSAPOG00000017395	srsf5a	62	80.541	ENSGAGG00000007312	-	70	75.543	Gopherus_agassizii
ENSAPOG00000017395	srsf5a	78	92.017	ENSHBUG00000014048	srsf5a	100	87.748	Haplochromis_burtoni
ENSAPOG00000017395	srsf5a	62	89.785	ENSHCOG00000017557	srsf5a	100	76.129	Hippocampus_comes
ENSAPOG00000017395	srsf5a	89	67.241	ENSIPUG00000003439	srsf5a	69	85.263	Ictalurus_punctatus
ENSAPOG00000017395	srsf5a	78	72.034	ENSKMAG00000014937	srsf5a	71	81.356	Kryptolebias_marmoratus
ENSAPOG00000017395	srsf5a	62	83.077	ENSLBEG00000017153	srsf5a	91	81.743	Labrus_bergylta
ENSAPOG00000017395	srsf5a	62	83.696	ENSLACG00000017874	-	70	80.978	Latimeria_chalumnae
ENSAPOG00000017395	srsf5a	62	85.789	ENSLOCG00000014075	srsf5a	61	87.027	Lepisosteus_oculatus
ENSAPOG00000017395	srsf5a	100	89.189	ENSMAMG00000000192	srsf5a	100	83.784	Mastacembelus_armatus
ENSAPOG00000017395	srsf5a	78	92.437	ENSMZEG00005010485	srsf5a	100	88.079	Maylandia_zebra
ENSAPOG00000017395	srsf5a	67	76.263	ENSMGAG00000011888	-	96	73.494	Meleagris_gallopavo
ENSAPOG00000017395	srsf5a	100	88.926	ENSMMOG00000009793	srsf5a	100	88.926	Mola_mola
ENSAPOG00000017395	srsf5a	100	82.095	ENSMALG00000021194	srsf5a	100	80.405	Monopterus_albus
ENSAPOG00000017395	srsf5a	78	92.827	ENSNBRG00000000771	srsf5a	100	88.372	Neolamprologus_brichardi
ENSAPOG00000017395	srsf5a	78	92.827	ENSONIG00000019583	srsf5a	100	88.372	Oreochromis_niloticus
ENSAPOG00000017395	srsf5a	78	78.448	ENSORLG00000009268	srsf5a	100	78.716	Oryzias_latipes
ENSAPOG00000017395	srsf5a	78	78.448	ENSORLG00020003281	srsf5	100	78.716	Oryzias_latipes_hni
ENSAPOG00000017395	srsf5a	78	78.448	ENSORLG00015023075	srsf5	100	78.716	Oryzias_latipes_hsok
ENSAPOG00000017395	srsf5a	78	77.056	ENSOMEG00000000628	srsf5a	100	79.392	Oryzias_melastigma
ENSAPOG00000017395	srsf5a	62	85.864	ENSPKIG00000002054	srsf5a	68	86.559	Paramormyrops_kingsleyae
ENSAPOG00000017395	srsf5a	62	80.000	ENSPSIG00000008238	-	69	76.216	Pelodiscus_sinensis
ENSAPOG00000017395	srsf5a	92	67.376	ENSPMGG00000020125	srsf5a	55	79.348	Periophthalmus_magnuspinnatus
ENSAPOG00000017395	srsf5a	80	78.039	ENSPFOG00000022993	srsf5a	78	68.273	Poecilia_formosa
ENSAPOG00000017395	srsf5a	80	77.953	ENSPLAG00000005508	srsf5a	77	68.145	Poecilia_latipinna
ENSAPOG00000017395	srsf5a	80	78.431	ENSPMEG00000016339	srsf5a	100	67.178	Poecilia_mexicana
ENSAPOG00000017395	srsf5a	80	78.125	ENSPREG00000018091	srsf5a	100	67.802	Poecilia_reticulata
ENSAPOG00000017395	srsf5a	78	92.437	ENSPNYG00000021245	srsf5a	100	88.079	Pundamilia_nyererei
ENSAPOG00000017395	srsf5a	62	87.634	ENSSFOG00015008377	srsf5	86	75.720	Scleropages_formosus
ENSAPOG00000017395	srsf5a	78	81.818	ENSSMAG00000010899	srsf5a	100	82.019	Scophthalmus_maximus
ENSAPOG00000017395	srsf5a	100	95.608	ENSSDUG00000006103	srsf5a	100	95.608	Seriola_dumerili
ENSAPOG00000017395	srsf5a	100	96.622	ENSSLDG00000004146	srsf5a	100	96.622	Seriola_lalandi_dorsalis
ENSAPOG00000017395	srsf5a	62	75.543	ENSSPUG00000002052	-	68	73.370	Sphenodon_punctatus
ENSAPOG00000017395	srsf5a	100	96.622	ENSSPAG00000002821	srsf5a	100	96.622	Stegastes_partitus
ENSAPOG00000017395	srsf5a	62	77.717	ENSTGUG00000011492	-	68	76.087	Taeniopygia_guttata
ENSAPOG00000017395	srsf5a	79	89.669	ENSTRUG00000022908	srsf5a	82	89.256	Takifugu_rubripes
ENSAPOG00000017395	srsf5a	99	62.162	ENSXETG00000017937	srsf5a	72	77.128	Xenopus_tropicalis
ENSAPOG00000017395	srsf5a	90	77.936	ENSXCOG00000015338	srsf5a	100	77.170	Xiphophorus_couchianus
ENSAPOG00000017395	srsf5a	80	78.039	ENSXMAG00000012823	srsf5a	100	67.081	Xiphophorus_maculatus