EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000017599 (Gene tree)
Gene ID: 110948567
Gene Symbol: snd1
Alias: SN4TDR|TDRD11|p100L|p100S|wu:fc27g10
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 212385 bases
Position: chrMVNR01000079.1:992306-1204690
Accession: 110948567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000030773	TUDOR	PF00567.24	5.8e-26	1	1
ENSAPOP00000014683	TUDOR	PF00567.24	5.9e-26	1	1
ENSAPOP00000014683	SNase	PF00565.17	1.4e-67	1	4
ENSAPOP00000014683	SNase	PF00565.17	1.4e-67	2	4
ENSAPOP00000014683	SNase	PF00565.17	1.4e-67	3	4
ENSAPOP00000014683	SNase	PF00565.17	1.4e-67	4	4
ENSAPOP00000030773	SNase	PF00565.17	5.9e-62	1	4
ENSAPOP00000030773	SNase	PF00565.17	5.9e-62	2	4
ENSAPOP00000030773	SNase	PF00565.17	5.9e-62	3	4
ENSAPOP00000030773	SNase	PF00565.17	5.9e-62	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000023221	-	4632	-	ENSAPOP00000030773	917 (aa)	-	-
ENSAPOT00000023173	-	3930	XM_022190155	ENSAPOP00000014683	910 (aa)	XP_022045847	UPI000B8F922C

Gene Model

Click here to download ENSAPOG00000017599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000017599's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000017599	snd1	99	84.538	ENSG00000197157	SND1	100	83.662	Homo_sapiens
ENSAPOG00000017599	snd1	100	83.698	ENSAMEG00000004664	SND1	94	83.698	Ailuropoda_melanoleuca
ENSAPOG00000017599	snd1	100	93.304	ENSACIG00000003551	snd1	100	93.304	Amphilophus_citrinellus
ENSAPOG00000017599	snd1	100	99.121	ENSAOCG00000014166	snd1	100	99.121	Amphiprion_ocellaris
ENSAPOG00000017599	snd1	100	99.121	ENSAPEG00000007067	snd1	100	99.121	Amphiprion_percula
ENSAPOG00000017599	snd1	98	96.309	ENSATEG00000018475	snd1	89	96.309	Anabas_testudineus
ENSAPOG00000017599	snd1	99	84.650	ENSANAG00000034463	SND1	99	84.876	Aotus_nancymaae
ENSAPOG00000017599	snd1	100	95.060	ENSACLG00000022897	snd1	100	95.060	Astatotilapia_calliptera
ENSAPOG00000017599	snd1	99	90.659	ENSAMXG00000016318	snd1	99	90.659	Astyanax_mexicanus
ENSAPOG00000017599	snd1	99	84.872	ENSBTAG00000010692	SND1	100	83.991	Bos_taurus
ENSAPOG00000017599	snd1	99	46.939	WBGene00006626	tsn-1	99	46.939	Caenorhabditis_elegans
ENSAPOG00000017599	snd1	99	84.650	ENSCJAG00000017668	SND1	99	84.876	Callithrix_jacchus
ENSAPOG00000017599	snd1	100	83.991	ENSCAFG00000001700	SND1	100	83.991	Canis_familiaris
ENSAPOG00000017599	snd1	100	83.991	ENSCAFG00020021639	SND1	100	83.991	Canis_lupus_dingo
ENSAPOG00000017599	snd1	99	84.761	ENSCHIG00000023390	SND1	100	83.882	Capra_hircus
ENSAPOG00000017599	snd1	70	87.368	ENSTSYG00000004979	SND1	96	87.368	Carlito_syrichta
ENSAPOG00000017599	snd1	97	74.662	ENSCAPG00000010677	SND1	97	74.025	Cavia_aperea
ENSAPOG00000017599	snd1	99	84.538	ENSCPOG00000006251	SND1	100	83.662	Cavia_porcellus
ENSAPOG00000017599	snd1	99	84.650	ENSCCAG00000036847	SND1	100	83.772	Cebus_capucinus
ENSAPOG00000017599	snd1	99	84.761	ENSCATG00000035214	SND1	99	84.989	Cercocebus_atys
ENSAPOG00000017599	snd1	99	84.650	ENSCLAG00000011796	SND1	100	83.772	Chinchilla_lanigera
ENSAPOG00000017599	snd1	99	84.761	ENSCSAG00000010182	SND1	100	83.882	Chlorocebus_sabaeus
ENSAPOG00000017599	snd1	77	79.208	ENSCHOG00000002218	SND1	86	79.208	Choloepus_hoffmanni
ENSAPOG00000017599	snd1	100	83.974	ENSCPBG00000018094	SND1	100	83.974	Chrysemys_picta_bellii
ENSAPOG00000017599	snd1	98	56.700	ENSCING00000000524	-	99	56.100	Ciona_intestinalis
ENSAPOG00000017599	snd1	99	57.642	ENSCSAVG00000008807	-	99	57.440	Ciona_savignyi
ENSAPOG00000017599	snd1	99	84.761	ENSCANG00000035119	SND1	100	83.882	Colobus_angolensis_palliatus
ENSAPOG00000017599	snd1	99	84.205	ENSCGRG00001022514	Snd1	100	83.443	Cricetulus_griseus_chok1gshd
ENSAPOG00000017599	snd1	97	84.424	ENSCGRG00000012277	Snd1	99	84.424	Cricetulus_griseus_crigri
ENSAPOG00000017599	snd1	100	94.512	ENSCSEG00000008661	snd1	100	94.512	Cynoglossus_semilaevis
ENSAPOG00000017599	snd1	100	95.829	ENSCVAG00000010316	snd1	100	95.829	Cyprinodon_variegatus
ENSAPOG00000017599	snd1	100	90.252	ENSDARG00000006766	snd1	99	91.579	Danio_rerio
ENSAPOG00000017599	snd1	97	83.015	ENSDNOG00000006795	SND1	100	83.015	Dasypus_novemcinctus
ENSAPOG00000017599	snd1	99	84.538	ENSDORG00000000336	Snd1	100	83.662	Dipodomys_ordii
ENSAPOG00000017599	snd1	98	50.704	FBgn0035121	Tudor-SN	99	50.321	Drosophila_melanogaster
ENSAPOG00000017599	snd1	90	91.667	ENSETEG00000000375	SND1	92	91.667	Echinops_telfairi
ENSAPOG00000017599	snd1	60	65.445	ENSEBUG00000014201	-	84	77.174	Eptatretus_burgeri
ENSAPOG00000017599	snd1	99	83.370	ENSEASG00005008513	SND1	100	82.524	Equus_asinus_asinus
ENSAPOG00000017599	snd1	99	84.538	ENSECAG00000011451	SND1	100	83.553	Equus_caballus
ENSAPOG00000017599	snd1	100	74.452	ENSEEUG00000014737	SND1	100	74.452	Erinaceus_europaeus
ENSAPOG00000017599	snd1	99	89.341	ENSELUG00000001805	snd1	96	89.341	Esox_lucius
ENSAPOG00000017599	snd1	100	83.882	ENSFCAG00000008289	SND1	100	83.882	Felis_catus
ENSAPOG00000017599	snd1	98	84.564	ENSFDAG00000015881	SND1	100	83.443	Fukomys_damarensis
ENSAPOG00000017599	snd1	100	93.233	ENSFHEG00000004093	snd1	99	95.314	Fundulus_heteroclitus
ENSAPOG00000017599	snd1	75	84.463	ENSGMOG00000018932	snd1	66	84.463	Gadus_morhua
ENSAPOG00000017599	snd1	100	96.597	ENSGAFG00000008421	snd1	100	96.597	Gambusia_affinis
ENSAPOG00000017599	snd1	100	62.473	ENSGACG00000019793	snd1	100	62.473	Gasterosteus_aculeatus
ENSAPOG00000017599	snd1	99	84.761	ENSGGOG00000009614	SND1	99	84.989	Gorilla_gorilla
ENSAPOG00000017599	snd1	100	95.060	ENSHBUG00000019135	snd1	100	95.060	Haplochromis_burtoni
ENSAPOG00000017599	snd1	99	84.316	ENSHGLG00000003618	SND1	100	83.443	Heterocephalus_glaber_female
ENSAPOG00000017599	snd1	99	84.222	ENSHGLG00100012449	SND1	99	84.222	Heterocephalus_glaber_male
ENSAPOG00000017599	snd1	100	93.085	ENSHCOG00000005266	snd1	100	93.085	Hippocampus_comes
ENSAPOG00000017599	snd1	99	89.243	ENSIPUG00000013279	snd1	99	89.243	Ictalurus_punctatus
ENSAPOG00000017599	snd1	99	84.650	ENSSTOG00000002140	SND1	100	83.772	Ictidomys_tridecemlineatus
ENSAPOG00000017599	snd1	99	84.650	ENSJJAG00000009561	Snd1	100	83.772	Jaculus_jaculus
ENSAPOG00000017599	snd1	100	96.268	ENSKMAG00000016997	snd1	100	96.268	Kryptolebias_marmoratus
ENSAPOG00000017599	snd1	100	95.966	ENSLBEG00000013563	snd1	100	94.621	Labrus_bergylta
ENSAPOG00000017599	snd1	99	88.754	ENSLOCG00000015537	snd1	99	88.139	Lepisosteus_oculatus
ENSAPOG00000017599	snd1	100	83.882	ENSLAFG00000009696	SND1	100	83.882	Loxodonta_africana
ENSAPOG00000017599	snd1	99	84.761	ENSMFAG00000038114	SND1	99	84.989	Macaca_fascicularis
ENSAPOG00000017599	snd1	99	84.761	ENSMMUG00000015432	SND1	100	83.882	Macaca_mulatta
ENSAPOG00000017599	snd1	99	84.761	ENSMNEG00000039808	SND1	100	85.006	Macaca_nemestrina
ENSAPOG00000017599	snd1	99	84.650	ENSMLEG00000029040	SND1	100	84.893	Mandrillus_leucophaeus
ENSAPOG00000017599	snd1	100	95.719	ENSMAMG00000011739	snd1	100	95.719	Mastacembelus_armatus
ENSAPOG00000017599	snd1	100	95.060	ENSMZEG00005005681	snd1	100	95.060	Maylandia_zebra
ENSAPOG00000017599	snd1	99	84.650	ENSMICG00000000097	SND1	100	83.772	Microcebus_murinus
ENSAPOG00000017599	snd1	99	84.872	ENSMOCG00000005040	Snd1	100	83.991	Microtus_ochrogaster
ENSAPOG00000017599	snd1	100	95.719	ENSMMOG00000001795	snd1	100	95.719	Mola_mola
ENSAPOG00000017599	snd1	99	84.093	ENSMODG00000015182	SND1	100	83.224	Monodelphis_domestica
ENSAPOG00000017599	snd1	100	95.719	ENSMALG00000012071	snd1	100	95.719	Monopterus_albus
ENSAPOG00000017599	snd1	98	84.676	MGP_CAROLIEiJ_G0028159	Snd1	99	85.042	Mus_caroli
ENSAPOG00000017599	snd1	98	84.452	ENSMUSG00000001424	Snd1	100	83.333	Mus_musculus
ENSAPOG00000017599	snd1	98	84.676	MGP_PahariEiJ_G0021917	Snd1	100	85.042	Mus_pahari
ENSAPOG00000017599	snd1	98	84.676	MGP_SPRETEiJ_G0029159	Snd1	100	83.553	Mus_spretus
ENSAPOG00000017599	snd1	100	83.772	ENSMPUG00000006545	SND1	100	83.333	Mustela_putorius_furo
ENSAPOG00000017599	snd1	97	83.724	ENSMLUG00000017130	SND1	99	83.055	Myotis_lucifugus
ENSAPOG00000017599	snd1	99	84.538	ENSNGAG00000011186	Snd1	100	83.662	Nannospalax_galili
ENSAPOG00000017599	snd1	100	95.060	ENSNBRG00000006681	snd1	100	95.060	Neolamprologus_brichardi
ENSAPOG00000017599	snd1	100	83.882	ENSNLEG00000012263	SND1	100	85.006	Nomascus_leucogenys
ENSAPOG00000017599	snd1	91	91.667	ENSOPRG00000013405	SND1	92	91.667	Ochotona_princeps
ENSAPOG00000017599	snd1	99	84.761	ENSODEG00000011502	SND1	100	84.101	Octodon_degus
ENSAPOG00000017599	snd1	100	95.170	ENSONIG00000011481	snd1	97	95.170	Oreochromis_niloticus
ENSAPOG00000017599	snd1	98	83.933	ENSOANG00000000817	SND1	98	83.933	Ornithorhynchus_anatinus
ENSAPOG00000017599	snd1	100	83.114	ENSOCUG00000001620	SND1	100	83.114	Oryctolagus_cuniculus
ENSAPOG00000017599	snd1	100	94.182	ENSORLG00000015201	snd1	100	94.182	Oryzias_latipes
ENSAPOG00000017599	snd1	100	94.402	ENSORLG00020013991	snd1	100	94.402	Oryzias_latipes_hni
ENSAPOG00000017599	snd1	100	94.402	ENSORLG00015012436	snd1	100	94.402	Oryzias_latipes_hsok
ENSAPOG00000017599	snd1	100	94.621	ENSOMEG00000006406	snd1	100	94.621	Oryzias_melastigma
ENSAPOG00000017599	snd1	99	84.573	ENSOGAG00000013356	SND1	94	83.698	Otolemur_garnettii
ENSAPOG00000017599	snd1	97	82.638	ENSOARG00000002149	SND1	100	82.638	Ovis_aries
ENSAPOG00000017599	snd1	99	84.650	ENSPPAG00000042947	SND1	99	84.876	Pan_paniscus
ENSAPOG00000017599	snd1	100	83.882	ENSPPRG00000004494	SND1	100	83.882	Panthera_pardus
ENSAPOG00000017599	snd1	100	83.772	ENSPTIG00000014214	SND1	100	83.772	Panthera_tigris_altaica
ENSAPOG00000017599	snd1	99	84.650	ENSPTRG00000023911	SND1	99	84.876	Pan_troglodytes
ENSAPOG00000017599	snd1	97	84.989	ENSPANG00000011997	SND1	99	84.989	Papio_anubis
ENSAPOG00000017599	snd1	99	86.990	ENSPKIG00000023494	snd1	99	86.587	Paramormyrops_kingsleyae
ENSAPOG00000017599	snd1	92	94.498	ENSPMGG00000003629	snd1	100	94.617	Periophthalmus_magnuspinnatus
ENSAPOG00000017599	snd1	99	84.650	ENSPEMG00000010240	Snd1	100	83.772	Peromyscus_maniculatus_bairdii
ENSAPOG00000017599	snd1	97	73.702	ENSPMAG00000007915	-	99	73.589	Petromyzon_marinus
ENSAPOG00000017599	snd1	99	84.650	ENSPCIG00000011561	SND1	100	83.772	Phascolarctos_cinereus
ENSAPOG00000017599	snd1	100	96.158	ENSPFOG00000001557	snd1	100	96.158	Poecilia_formosa
ENSAPOG00000017599	snd1	100	96.158	ENSPLAG00000018459	snd1	97	96.158	Poecilia_latipinna
ENSAPOG00000017599	snd1	100	96.378	ENSPMEG00000006803	snd1	100	96.378	Poecilia_mexicana
ENSAPOG00000017599	snd1	100	96.158	ENSPREG00000002189	snd1	100	96.158	Poecilia_reticulata
ENSAPOG00000017599	snd1	91	91.667	ENSPPYG00000017972	SND1	100	91.667	Pongo_abelii
ENSAPOG00000017599	snd1	100	74.123	ENSPCAG00000011305	SND1	100	74.123	Procavia_capensis
ENSAPOG00000017599	snd1	99	84.761	ENSPCOG00000026791	SND1	100	85.006	Propithecus_coquereli
ENSAPOG00000017599	snd1	99	82.647	ENSPVAG00000013945	SND1	100	81.798	Pteropus_vampyrus
ENSAPOG00000017599	snd1	100	95.170	ENSPNYG00000000932	snd1	100	95.170	Pundamilia_nyererei
ENSAPOG00000017599	snd1	99	90.549	ENSPNAG00000001206	snd1	99	90.549	Pygocentrus_nattereri
ENSAPOG00000017599	snd1	98	84.564	ENSRNOG00000031173	Snd1	100	83.653	Rattus_norvegicus
ENSAPOG00000017599	snd1	69	87.879	ENSRBIG00000027782	-	93	87.879	Rhinopithecus_bieti
ENSAPOG00000017599	snd1	99	84.761	ENSRROG00000033020	SND1	100	83.882	Rhinopithecus_roxellana
ENSAPOG00000017599	snd1	99	84.538	ENSSBOG00000032461	SND1	99	84.763	Saimiri_boliviensis_boliviensis
ENSAPOG00000017599	snd1	98	81.461	ENSSHAG00000015359	SND1	100	81.461	Sarcophilus_harrisii
ENSAPOG00000017599	snd1	98	88.137	ENSSFOG00015001103	snd1	99	87.473	Scleropages_formosus
ENSAPOG00000017599	snd1	100	95.390	ENSSMAG00000001932	snd1	95	95.390	Scophthalmus_maximus
ENSAPOG00000017599	snd1	100	97.475	ENSSDUG00000002699	snd1	94	97.475	Seriola_dumerili
ENSAPOG00000017599	snd1	100	89.901	ENSSLDG00000001950	snd1	100	89.901	Seriola_lalandi_dorsalis
ENSAPOG00000017599	snd1	86	79.971	ENSSARG00000004877	SND1	92	79.971	Sorex_araneus
ENSAPOG00000017599	snd1	70	80.936	ENSSPUG00000017586	SND1	96	80.936	Sphenodon_punctatus
ENSAPOG00000017599	snd1	73	96.447	ENSSPAG00000021398	snd1	99	96.447	Stegastes_partitus
ENSAPOG00000017599	snd1	99	84.427	ENSSSCG00000016590	SND1	100	83.553	Sus_scrofa
ENSAPOG00000017599	snd1	100	93.624	ENSTRUG00000014067	snd1	100	93.085	Takifugu_rubripes
ENSAPOG00000017599	snd1	100	92.975	ENSTNIG00000011019	snd1	100	92.975	Tetraodon_nigroviridis
ENSAPOG00000017599	snd1	93	79.176	ENSTBEG00000003999	SND1	100	79.176	Tupaia_belangeri
ENSAPOG00000017599	snd1	99	80.311	ENSTTRG00000006059	SND1	100	79.496	Tursiops_truncatus
ENSAPOG00000017599	snd1	69	76.762	ENSUAMG00000002820	-	89	76.762	Ursus_americanus
ENSAPOG00000017599	snd1	87	83.840	ENSUAMG00000005604	-	93	83.840	Ursus_americanus
ENSAPOG00000017599	snd1	100	83.882	ENSUMAG00000005960	SND1	100	83.882	Ursus_maritimus
ENSAPOG00000017599	snd1	77	91.667	ENSVPAG00000008302	SND1	74	91.667	Vicugna_pacos
ENSAPOG00000017599	snd1	100	83.882	ENSVVUG00000007226	SND1	100	83.882	Vulpes_vulpes
ENSAPOG00000017599	snd1	97	80.158	ENSXETG00000023043	snd1	100	79.909	Xenopus_tropicalis
ENSAPOG00000017599	snd1	92	93.824	ENSXCOG00000013629	snd1	99	93.824	Xiphophorus_couchianus
ENSAPOG00000017599	snd1	100	96.926	ENSXMAG00000011469	snd1	100	96.926	Xiphophorus_maculatus