EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPOG00000017776 (Gene tree)
Gene ID
110964463
Gene Symbol
pabpc1b
Alias
-
Full Name
polyadenylate-binding protein 1
Gene Type
protein_coding
Species
Acanthochromis_polyacanthus
Status
putative
Strand
Plus strand
Length
9224 bases
Position
chrMVNR01000004.1:785726-794949
Accession
110964463
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPOP00000014783PABPPF00658.184.4e-3211
ENSAPOP00000014797PABPPF00658.184.7e-3211
ENSAPOP00000014783RRM_5PF13893.62.4e-0912
ENSAPOP00000014783RRM_5PF13893.62.4e-0922
ENSAPOP00000014797RRM_5PF13893.62.7e-0912
ENSAPOP00000014797RRM_5PF13893.62.7e-0922
ENSAPOP00000014783RRM_1PF00076.226.7e-9014
ENSAPOP00000014783RRM_1PF00076.226.7e-9024
ENSAPOP00000014783RRM_1PF00076.226.7e-9034
ENSAPOP00000014783RRM_1PF00076.226.7e-9044
ENSAPOP00000014797RRM_1PF00076.228.1e-9014
ENSAPOP00000014797RRM_1PF00076.228.1e-9024
ENSAPOP00000014797RRM_1PF00076.228.1e-9034
ENSAPOP00000014797RRM_1PF00076.228.1e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPOT00000023301-3073XM_022213249ENSAPOP00000014797634 (aa)XP_022068941UPI000B904A14
ENSAPOT00000023286-1842-ENSAPOP00000014783613 (aa)--
Gene Model
Click here to download ENSAPOG00000017776's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000017776's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPOG00000017776pabpc1b9976.244ENSAPOG00000001161pabpc49876.471
ENSAPOG00000017776pabpc1b5136.986ENSAPOG00000006015celf3a6036.986
ENSAPOG00000017776pabpc1b6232.667ENSAPOG00000022121ELAVL28532.667
ENSAPOG00000017776pabpc1b5334.091ENSAPOG00000017441-6034.091
ENSAPOG00000017776pabpc1b5734.091ENSAPOG00000024000celf17234.091
ENSAPOG00000017776pabpc1b6241.026ENSAPOG00000000306rbm39b7041.026
ENSAPOG00000017776pabpc1b5535.227ENSAPOG00000008530-5136.047
ENSAPOG00000017776pabpc1b5937.333ENSAPOG00000010507rbm197037.333
ENSAPOG00000017776pabpc1b10090.439ENSAPOG00000015105pabpc1a10090.439
ENSAPOG00000017776pabpc1b9966.880ENSAPOG00000010842pabpc1l10066.933
ENSAPOG00000017776pabpc1b6030.682ENSAPOG00000001876tia17130.108
ENSAPOG00000017776pabpc1b5232.867ENSAPOG00000007089tia1l6932.192
ENSAPOG00000017776pabpc1b6130.921ENSAPOG00000017565elavl39130.719
ENSAPOG00000017776pabpc1b6136.145ENSAPOG00000020329elavl48436.145
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPOG00000017776pabpc1b6079.592ENSG00000186288PABPC1L2A9879.592Homo_sapiens
ENSAPOG00000017776pabpc1b6079.592ENSG00000184388PABPC1L2B9879.592Homo_sapiens
ENSAPOG00000017776pabpc1b6179.592ENSAMEG00000019441-9879.592Ailuropoda_melanoleuca
ENSAPOG00000017776pabpc1b10090.596ENSACIG00000004685pabpc1a10090.596Amphilophus_citrinellus
ENSAPOG00000017776pabpc1b10093.419ENSACIG00000018366pabpc1b10093.419Amphilophus_citrinellus
ENSAPOG00000017776pabpc1b10098.896ENSAOCG00000019839pabpc1b10098.896Amphiprion_ocellaris
ENSAPOG00000017776pabpc1b10090.282ENSAOCG00000011656pabpc1a10090.439Amphiprion_ocellaris
ENSAPOG00000017776pabpc1b10090.282ENSAPEG00000006963pabpc1a10090.439Amphiprion_percula
ENSAPOG00000017776pabpc1b10098.896ENSAPEG00000010435pabpc1b10098.896Amphiprion_percula
ENSAPOG00000017776pabpc1b10097.170ENSATEG00000012917pabpc1b10097.170Anabas_testudineus
ENSAPOG00000017776pabpc1b10090.439ENSATEG00000024852pabpc1a10090.752Anabas_testudineus
ENSAPOG00000017776pabpc1b6079.592ENSANAG00000019431-9879.592Aotus_nancymaae
ENSAPOG00000017776pabpc1b6079.592ENSANAG00000019429-9879.592Aotus_nancymaae
ENSAPOG00000017776pabpc1b10090.439ENSACLG00000009399pabpc1a10094.005Astatotilapia_calliptera
ENSAPOG00000017776pabpc1b10096.845ENSACLG00000014335pabpc1b10096.845Astatotilapia_calliptera
ENSAPOG00000017776pabpc1b10095.276ENSAMXG00000008599pabpc1b10095.276Astyanax_mexicanus
ENSAPOG00000017776pabpc1b6176.555ENSBTAG00000052491-9876.555Bos_taurus
ENSAPOG00000017776pabpc1b6178.537ENSBTAG00000050902-9878.537Bos_taurus
ENSAPOG00000017776pabpc1b6079.592ENSCJAG00000041326-9879.592Callithrix_jacchus
ENSAPOG00000017776pabpc1b6178.537ENSCAFG00020002052-9878.537Canis_lupus_dingo
ENSAPOG00000017776pabpc1b6079.592ENSCHIG00000011138-9879.592Capra_hircus
ENSAPOG00000017776pabpc1b6079.592ENSCHIG00000006283-9879.592Capra_hircus
ENSAPOG00000017776pabpc1b6079.592ENSTSYG00000001775-9879.592Carlito_syrichta
ENSAPOG00000017776pabpc1b6179.592ENSCPOG00000009525-9879.592Cavia_porcellus
ENSAPOG00000017776pabpc1b6079.592ENSCCAG00000031524-9879.592Cebus_capucinus
ENSAPOG00000017776pabpc1b6079.592ENSCATG00000042826-9879.592Cercocebus_atys
ENSAPOG00000017776pabpc1b6079.592ENSCATG00000043125-9879.592Cercocebus_atys
ENSAPOG00000017776pabpc1b6077.551ENSCLAG00000017409-9877.551Chinchilla_lanigera
ENSAPOG00000017776pabpc1b6077.551ENSCLAG00000017412-9877.551Chinchilla_lanigera
ENSAPOG00000017776pabpc1b6179.592ENSCSAG00000000102-9879.592Chlorocebus_sabaeus
ENSAPOG00000017776pabpc1b6079.558ENSCGRG00001023387-9677.320Cricetulus_griseus_chok1gshd
ENSAPOG00000017776pabpc1b9990.317ENSCSEG00000013324pabpc1a9990.476Cynoglossus_semilaevis
ENSAPOG00000017776pabpc1b10091.798ENSCSEG00000015241-10091.798Cynoglossus_semilaevis
ENSAPOG00000017776pabpc1b10094.016ENSCVAG00000005489pabpc1b10094.016Cyprinodon_variegatus
ENSAPOG00000017776pabpc1b10090.125ENSCVAG00000021872pabpc1a10090.125Cyprinodon_variegatus
ENSAPOG00000017776pabpc1b10095.276ENSDARG00000021140pabpc1b10096.063Danio_rerio
ENSAPOG00000017776pabpc1b10091.352ENSDARG00000017219pabpc1a10091.509Danio_rerio
ENSAPOG00000017776pabpc1b6179.894ENSDNOG00000030926-9878.061Dasypus_novemcinctus
ENSAPOG00000017776pabpc1b6077.041ENSDORG00000011362-9877.041Dipodomys_ordii
ENSAPOG00000017776pabpc1b6178.155ENSEASG00005010399-9878.155Equus_asinus_asinus
ENSAPOG00000017776pabpc1b6178.155ENSECAG00000002620-9878.155Equus_caballus
ENSAPOG00000017776pabpc1b6175.000ENSEEUG00000008203-9875.000Erinaceus_europaeus
ENSAPOG00000017776pabpc1b9991.824ENSELUG00000003614pabpc1a10091.667Esox_lucius
ENSAPOG00000017776pabpc1b10092.308ENSELUG00000015062-10092.308Esox_lucius
ENSAPOG00000017776pabpc1b6159.483ENSELUG00000005389-9759.483Esox_lucius
ENSAPOG00000017776pabpc1b6079.592ENSFCAG00000039701-9879.592Felis_catus
ENSAPOG00000017776pabpc1b6179.592ENSFDAG00000005484-9879.592Fukomys_damarensis
ENSAPOG00000017776pabpc1b10094.479ENSFHEG00000008186pabpc1b10094.479Fundulus_heteroclitus
ENSAPOG00000017776pabpc1b10090.282ENSFHEG00000018979pabpc1a10090.439Fundulus_heteroclitus
ENSAPOG00000017776pabpc1b9196.806ENSGMOG00000002448-10085.826Gadus_morhua
ENSAPOG00000017776pabpc1b9989.938ENSGMOG00000013448pabpc1a9989.938Gadus_morhua
ENSAPOG00000017776pabpc1b10089.969ENSGAFG00000019750pabpc1a10090.282Gambusia_affinis
ENSAPOG00000017776pabpc1b10096.057ENSGAFG00000010193pabpc1b10096.057Gambusia_affinis
ENSAPOG00000017776pabpc1b10091.066ENSGACG00000003572pabpc1a10091.066Gasterosteus_aculeatus
ENSAPOG00000017776pabpc1b10093.458ENSGACG00000003771pabpc1b10093.769Gasterosteus_aculeatus
ENSAPOG00000017776pabpc1b6079.592ENSGGOG00000038606-9879.592Gorilla_gorilla
ENSAPOG00000017776pabpc1b6079.592ENSGGOG00000043933-9879.592Gorilla_gorilla
ENSAPOG00000017776pabpc1b10090.439ENSHBUG00000020487pabpc1a10094.005Haplochromis_burtoni
ENSAPOG00000017776pabpc1b10096.845ENSHBUG00000002075pabpc1b10096.845Haplochromis_burtoni
ENSAPOG00000017776pabpc1b6078.571ENSHGLG00000019668-9878.571Heterocephalus_glaber_female
ENSAPOG00000017776pabpc1b6078.571ENSHGLG00000019762-9878.571Heterocephalus_glaber_female
ENSAPOG00000017776pabpc1b6178.571ENSHGLG00100020854-9878.571Heterocephalus_glaber_male
ENSAPOG00000017776pabpc1b9871.154ENSHCOG00000003175pabpc1b9982.609Hippocampus_comes
ENSAPOG00000017776pabpc1b10089.969ENSHCOG00000013502pabpc1a10090.125Hippocampus_comes
ENSAPOG00000017776pabpc1b10088.976ENSIPUG00000008848pabpc1a10088.976Ictalurus_punctatus
ENSAPOG00000017776pabpc1b10090.717ENSIPUG00000010791-10089.968Ictalurus_punctatus
ENSAPOG00000017776pabpc1b7257.955ENSIPUG00000021244-6555.324Ictalurus_punctatus
ENSAPOG00000017776pabpc1b7455.224ENSIPUG00000018724-7655.224Ictalurus_punctatus
ENSAPOG00000017776pabpc1b6179.082ENSSTOG00000022096-9879.082Ictidomys_tridecemlineatus
ENSAPOG00000017776pabpc1b6179.082ENSSTOG00000026028-9879.082Ictidomys_tridecemlineatus
ENSAPOG00000017776pabpc1b6078.061ENSJJAG00000007037-9878.061Jaculus_jaculus
ENSAPOG00000017776pabpc1b10090.752ENSKMAG00000000605pabpc1a10090.596Kryptolebias_marmoratus
ENSAPOG00000017776pabpc1b10094.479ENSKMAG00000008049pabpc1b10094.795Kryptolebias_marmoratus
ENSAPOG00000017776pabpc1b10097.161ENSLBEG00000026845pabpc1b10097.161Labrus_bergylta
ENSAPOG00000017776pabpc1b10090.909ENSLBEG00000024002-10090.909Labrus_bergylta
ENSAPOG00000017776pabpc1b6178.974ENSLAFG00000023096-9878.974Loxodonta_africana
ENSAPOG00000017776pabpc1b6079.188ENSMFAG00000028878-9879.188Macaca_fascicularis
ENSAPOG00000017776pabpc1b6079.592ENSMMUG00000037681-9879.592Macaca_mulatta
ENSAPOG00000017776pabpc1b6079.592ENSMMUG00000039929-9879.592Macaca_mulatta
ENSAPOG00000017776pabpc1b6079.592ENSMMUG00000009740-9879.592Macaca_mulatta
ENSAPOG00000017776pabpc1b6079.592ENSMNEG00000037732-9879.592Macaca_nemestrina
ENSAPOG00000017776pabpc1b6079.592ENSMLEG00000027495-9879.592Mandrillus_leucophaeus
ENSAPOG00000017776pabpc1b10097.161ENSMAMG00000014610pabpc1b10097.161Mastacembelus_armatus
ENSAPOG00000017776pabpc1b10090.125ENSMAMG00000004502-10093.525Mastacembelus_armatus
ENSAPOG00000017776pabpc1b10096.845ENSMZEG00005026745pabpc1b10096.845Maylandia_zebra
ENSAPOG00000017776pabpc1b10090.439ENSMZEG00005025416pabpc1a10094.005Maylandia_zebra
ENSAPOG00000017776pabpc1b6079.592ENSMICG00000047642-9879.592Microcebus_murinus
ENSAPOG00000017776pabpc1b10092.822ENSMMOG00000018009pabpc1b10092.985Mola_mola
ENSAPOG00000017776pabpc1b10088.647ENSMMOG00000018044pabpc1a10092.806Mola_mola
ENSAPOG00000017776pabpc1b9873.408ENSMODG00000013156-9873.726Monodelphis_domestica
ENSAPOG00000017776pabpc1b9967.247ENSMODG00000015024-9967.247Monodelphis_domestica
ENSAPOG00000017776pabpc1b10090.379ENSMALG00000006066pabpc1b10090.536Monopterus_albus
ENSAPOG00000017776pabpc1b10089.969ENSMALG00000013020-10090.439Monopterus_albus
ENSAPOG00000017776pabpc1b6081.421ENSNGAG00000012688-9878.061Nannospalax_galili
ENSAPOG00000017776pabpc1b10090.282ENSNBRG00000003068-10094.005Neolamprologus_brichardi
ENSAPOG00000017776pabpc1b10096.845ENSNBRG00000013737pabpc1b10096.845Neolamprologus_brichardi
ENSAPOG00000017776pabpc1b6079.592ENSNLEG00000018128-9879.592Nomascus_leucogenys
ENSAPOG00000017776pabpc1b6079.082ENSODEG00000018540-9879.082Octodon_degus
ENSAPOG00000017776pabpc1b10090.282ENSONIG00000006871-10090.282Oreochromis_niloticus
ENSAPOG00000017776pabpc1b10096.372ENSONIG00000002717pabpc1b10096.372Oreochromis_niloticus
ENSAPOG00000017776pabpc1b6179.592ENSOCUG00000002565-9879.592Oryctolagus_cuniculus
ENSAPOG00000017776pabpc1b10087.066ENSORLG00000003008-10087.066Oryzias_latipes
ENSAPOG00000017776pabpc1b9993.587ENSORLG00000002691pabpc1a10093.587Oryzias_latipes
ENSAPOG00000017776pabpc1b10089.342ENSORLG00020022398pabpc1a10089.498Oryzias_latipes_hni
ENSAPOG00000017776pabpc1b10087.066ENSORLG00020022259-10087.066Oryzias_latipes_hni
ENSAPOG00000017776pabpc1b10087.382ENSORLG00015010932-10087.382Oryzias_latipes_hsok
ENSAPOG00000017776pabpc1b10089.185ENSORLG00015013633pabpc110089.342Oryzias_latipes_hsok
ENSAPOG00000017776pabpc1b9584.211ENSOMEG00000013627pabpc1b10087.019Oryzias_melastigma
ENSAPOG00000017776pabpc1b10089.812ENSOMEG00000020219pabpc1a10090.125Oryzias_melastigma
ENSAPOG00000017776pabpc1b6179.592ENSOGAG00000026047-9879.592Otolemur_garnettii
ENSAPOG00000017776pabpc1b6179.592ENSOGAG00000029513-9879.592Otolemur_garnettii
ENSAPOG00000017776pabpc1b6179.592ENSOARG00000005943-9879.592Ovis_aries
ENSAPOG00000017776pabpc1b6079.592ENSPPAG00000012920-9879.592Pan_paniscus
ENSAPOG00000017776pabpc1b6179.592ENSPPRG00000011804-9879.592Panthera_pardus
ENSAPOG00000017776pabpc1b6179.592ENSPPRG00000011809-9879.592Panthera_pardus
ENSAPOG00000017776pabpc1b6079.592ENSPTRG00000028252-9879.592Pan_troglodytes
ENSAPOG00000017776pabpc1b6079.592ENSPANG00000011549-9879.592Papio_anubis
ENSAPOG00000017776pabpc1b10096.378ENSPKIG00000005676pabpc1b10096.378Paramormyrops_kingsleyae
ENSAPOG00000017776pabpc1b7491.832ENSPMGG00000022487pabpc1a9391.832Periophthalmus_magnuspinnatus
ENSAPOG00000017776pabpc1b7493.612ENSPMGG00000023134-9893.612Periophthalmus_magnuspinnatus
ENSAPOG00000017776pabpc1b9970.701ENSPCIG00000016995-5570.701Phascolarctos_cinereus
ENSAPOG00000017776pabpc1b10095.426ENSPFOG00000005917pabpc1b10095.426Poecilia_formosa
ENSAPOG00000017776pabpc1b10088.923ENSPFOG00000010815pabpc1a10089.231Poecilia_formosa
ENSAPOG00000017776pabpc1b10095.741ENSPLAG00000001388pabpc1b10095.741Poecilia_latipinna
ENSAPOG00000017776pabpc1b10090.439ENSPLAG00000004114pabpc1a10090.752Poecilia_latipinna
ENSAPOG00000017776pabpc1b10090.439ENSPMEG00000001334pabpc1a10090.752Poecilia_mexicana
ENSAPOG00000017776pabpc1b10095.426ENSPMEG00000014399pabpc1b10095.426Poecilia_mexicana
ENSAPOG00000017776pabpc1b10095.741ENSPREG00000010911pabpc1b10095.741Poecilia_reticulata
ENSAPOG00000017776pabpc1b10090.228ENSPREG00000019595pabpc1a10093.525Poecilia_reticulata
ENSAPOG00000017776pabpc1b6179.592ENSPPYG00000020468-9879.592Pongo_abelii
ENSAPOG00000017776pabpc1b6179.592ENSPCAG00000005308-9879.592Procavia_capensis
ENSAPOG00000017776pabpc1b6079.082ENSPCOG00000026349-9879.082Propithecus_coquereli
ENSAPOG00000017776pabpc1b6180.000ENSPVAG00000016117-9880.000Pteropus_vampyrus
ENSAPOG00000017776pabpc1b10090.439ENSPNYG00000005192pabpc1a10090.439Pundamilia_nyererei
ENSAPOG00000017776pabpc1b10096.845ENSPNYG00000012578pabpc1b10096.845Pundamilia_nyererei
ENSAPOG00000017776pabpc1b10094.803ENSPNAG00000024626pabpc1b10094.803Pygocentrus_nattereri
ENSAPOG00000017776pabpc1b10090.881ENSPNAG00000028408pabpc1a10090.881Pygocentrus_nattereri
ENSAPOG00000017776pabpc1b9990.164ENSRBIG00000028738-9590.164Rhinopithecus_bieti
ENSAPOG00000017776pabpc1b6079.592ENSRBIG00000027173-9879.592Rhinopithecus_bieti
ENSAPOG00000017776pabpc1b6079.592ENSRROG00000017404-9879.592Rhinopithecus_roxellana
ENSAPOG00000017776pabpc1b9863.826ENSSHAG00000000511-10063.826Sarcophilus_harrisii
ENSAPOG00000017776pabpc1b10095.268ENSSFOG00015002752-10095.268Scleropages_formosus
ENSAPOG00000017776pabpc1b7280.347ENSSFOG00015019668-9180.347Scleropages_formosus
ENSAPOG00000017776pabpc1b10091.811ENSSFOG00015006662pabpc1a10091.811Scleropages_formosus
ENSAPOG00000017776pabpc1b10090.596ENSSMAG00000010803pabpc1a10090.596Scophthalmus_maximus
ENSAPOG00000017776pabpc1b10096.688ENSSMAG00000006869pabpc1b10096.688Scophthalmus_maximus
ENSAPOG00000017776pabpc1b10090.752ENSSDUG00000006675pabpc1a10090.909Seriola_dumerili
ENSAPOG00000017776pabpc1b10096.057ENSSDUG00000011965pabpc1b10096.057Seriola_dumerili
ENSAPOG00000017776pabpc1b10090.752ENSSLDG00000011661pabpc1a10090.909Seriola_lalandi_dorsalis
ENSAPOG00000017776pabpc1b10097.809ENSSLDG00000014156pabpc1b10097.809Seriola_lalandi_dorsalis
ENSAPOG00000017776pabpc1b10090.439ENSSPAG00000014453-10090.596Stegastes_partitus
ENSAPOG00000017776pabpc1b10098.580ENSSPAG00000019265pabpc1b10098.580Stegastes_partitus
ENSAPOG00000017776pabpc1b6079.592ENSSSCG00000032167-9879.592Sus_scrofa
ENSAPOG00000017776pabpc1b6079.592ENSSSCG00000036336-9879.592Sus_scrofa
ENSAPOG00000017776pabpc1b10091.969ENSTRUG00000003767-10091.969Takifugu_rubripes
ENSAPOG00000017776pabpc1b10090.282ENSTRUG00000011577-10090.282Takifugu_rubripes
ENSAPOG00000017776pabpc1b10092.006ENSTNIG00000009153pabpc1b10092.006Tetraodon_nigroviridis
ENSAPOG00000017776pabpc1b10087.326ENSTNIG00000013307pabpc1a10087.326Tetraodon_nigroviridis
ENSAPOG00000017776pabpc1b6179.592ENSTTRG00000013181-9879.592Tursiops_truncatus
ENSAPOG00000017776pabpc1b6079.592ENSUAMG00000008089-9879.592Ursus_americanus
ENSAPOG00000017776pabpc1b6079.592ENSUMAG00000003364-9879.592Ursus_maritimus
ENSAPOG00000017776pabpc1b9753.560ENSUMAG00000023926-8967.127Ursus_maritimus
ENSAPOG00000017776pabpc1b6178.500ENSVVUG00000015892-9778.500Vulpes_vulpes
ENSAPOG00000017776pabpc1b9946.963ENSXETG00000015439-10046.729Xenopus_tropicalis
ENSAPOG00000017776pabpc1b10089.723ENSXCOG00000017066pabpc1a10089.886Xiphophorus_couchianus
ENSAPOG00000017776pabpc1b10090.536ENSXCOG00000019901pabpc1b10090.379Xiphophorus_couchianus
ENSAPOG00000017776pabpc1b10095.899ENSXMAG00000003753pabpc1b10095.899Xiphophorus_maculatus
ENSAPOG00000017776pabpc1b10090.439ENSXMAG00000002555pabpc1a10090.752Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us