EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000017945 (Gene tree)
Gene ID: 110967921
Gene Symbol: polr1a
Alias: fa26a03|sb:cb935|wu:fa26a03
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 32124 bases
Position: chrMVNR01001938.1:398-32521
Accession: 110967921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000015015	RNA_pol_Rpb1_5	PF04998.17	1.6e-31	1	1
ENSAPOP00000015013	RNA_pol_Rpb1_5	PF04998.17	1.9e-31	1	1
ENSAPOP00000015015	RNA_pol_Rpb1_4	PF05000.17	4.4e-21	1	1
ENSAPOP00000015013	RNA_pol_Rpb1_4	PF05000.17	5.1e-21	1	1
ENSAPOP00000015015	RNA_pol_Rpb1_2	PF00623.20	9.4e-69	1	1
ENSAPOP00000015013	RNA_pol_Rpb1_2	PF00623.20	1.1e-68	1	1
ENSAPOP00000015015	RNA_pol_Rpb1_3	PF04983.18	2.2e-37	1	1
ENSAPOP00000015013	RNA_pol_Rpb1_3	PF04983.18	2.6e-37	1	1
ENSAPOP00000015013	RNA_pol_Rpb1_1	PF04997.12	7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000023585	-	3744	XM_022217676	ENSAPOP00000015013	1175 (aa)	XP_022073368	UPI000B901FAE
ENSAPOT00000023574	-	3845	-	ENSAPOP00000015015	1044 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000017945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000017945's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000017945	polr1a	58	30.877	ENSAPOG00000022727	polr3a	74	31.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000017945	polr1a	99	67.929	ENSG00000068654	POLR1A	71	67.929	Homo_sapiens
ENSAPOG00000017945	polr1a	99	68.350	ENSAMEG00000005807	POLR1A	100	69.113	Ailuropoda_melanoleuca
ENSAPOG00000017945	polr1a	100	82.638	ENSACIG00000022147	polr1a	69	82.468	Amphilophus_citrinellus
ENSAPOG00000017945	polr1a	99	97.528	ENSAOCG00000017336	polr1a	69	97.528	Amphiprion_ocellaris
ENSAPOG00000017945	polr1a	99	97.528	ENSAPEG00000016105	polr1a	69	97.528	Amphiprion_percula
ENSAPOG00000017945	polr1a	99	88.235	ENSATEG00000016773	polr1a	69	88.235	Anabas_testudineus
ENSAPOG00000017945	polr1a	89	70.899	ENSAPLG00000013871	POLR1A	64	70.899	Anas_platyrhynchos
ENSAPOG00000017945	polr1a	98	67.119	ENSACAG00000012141	POLR1A	69	66.780	Anolis_carolinensis
ENSAPOG00000017945	polr1a	99	67.593	ENSANAG00000033927	POLR1A	69	67.593	Aotus_nancymaae
ENSAPOG00000017945	polr1a	99	78.965	ENSACLG00000020541	polr1a	68	78.541	Astatotilapia_calliptera
ENSAPOG00000017945	polr1a	99	67.845	ENSBTAG00000006481	POLR1A	69	67.761	Bos_taurus
ENSAPOG00000017945	polr1a	99	37.914	WBGene00012999	rpoa-1	69	38.250	Caenorhabditis_elegans
ENSAPOG00000017945	polr1a	99	67.172	ENSCJAG00000019547	POLR1A	69	67.003	Callithrix_jacchus
ENSAPOG00000017945	polr1a	99	68.044	ENSCAFG00000007613	POLR1A	69	68.044	Canis_familiaris
ENSAPOG00000017945	polr1a	99	67.918	ENSCAFG00020014752	POLR1A	95	69.483	Canis_lupus_dingo
ENSAPOG00000017945	polr1a	99	67.761	ENSCHIG00000018204	POLR1A	76	67.761	Capra_hircus
ENSAPOG00000017945	polr1a	99	67.736	ENSTSYG00000002761	POLR1A	69	67.736	Carlito_syrichta
ENSAPOG00000017945	polr1a	99	66.190	ENSCAPG00000010132	POLR1A	70	66.961	Cavia_aperea
ENSAPOG00000017945	polr1a	99	68.071	ENSCPOG00000012350	POLR1A	69	67.818	Cavia_porcellus
ENSAPOG00000017945	polr1a	99	67.508	ENSCCAG00000019839	POLR1A	69	67.508	Cebus_capucinus
ENSAPOG00000017945	polr1a	99	68.266	ENSCATG00000029786	POLR1A	69	67.929	Cercocebus_atys
ENSAPOG00000017945	polr1a	99	67.477	ENSCLAG00000005187	POLR1A	69	67.477	Chinchilla_lanigera
ENSAPOG00000017945	polr1a	99	68.182	ENSCSAG00000016251	POLR1A	69	67.845	Chlorocebus_sabaeus
ENSAPOG00000017945	polr1a	69	80.905	ENSCHOG00000003766	-	84	80.905	Choloepus_hoffmanni
ENSAPOG00000017945	polr1a	98	69.506	ENSCPBG00000001115	POLR1A	70	69.506	Chrysemys_picta_bellii
ENSAPOG00000017945	polr1a	99	50.279	ENSCSAVG00000007184	-	70	49.748	Ciona_savignyi
ENSAPOG00000017945	polr1a	99	64.340	ENSCANG00000031785	POLR1A	68	64.003	Colobus_angolensis_palliatus
ENSAPOG00000017945	polr1a	94	67.540	ENSCGRG00001006651	Polr1a	68	61.274	Cricetulus_griseus_chok1gshd
ENSAPOG00000017945	polr1a	99	80.239	ENSCSEG00000020190	polr1a	70	80.068	Cynoglossus_semilaevis
ENSAPOG00000017945	polr1a	99	83.802	ENSCVAG00000020941	polr1a	69	83.802	Cyprinodon_variegatus
ENSAPOG00000017945	polr1a	99	74.223	ENSDARG00000098375	polr1a	70	73.971	Danio_rerio
ENSAPOG00000017945	polr1a	99	66.162	ENSDNOG00000010829	POLR1A	69	66.162	Dasypus_novemcinctus
ENSAPOG00000017945	polr1a	99	66.947	ENSDORG00000008298	Polr1a	69	66.947	Dipodomys_ordii
ENSAPOG00000017945	polr1a	99	44.501	FBgn0019938	RpI1	70	43.814	Drosophila_melanogaster
ENSAPOG00000017945	polr1a	75	64.299	ENSETEG00000000412	-	53	64.299	Echinops_telfairi
ENSAPOG00000017945	polr1a	83	52.234	ENSEBUG00000005667	-	68	48.144	Eptatretus_burgeri
ENSAPOG00000017945	polr1a	99	68.350	ENSEASG00005001625	POLR1A	69	68.350	Equus_asinus_asinus
ENSAPOG00000017945	polr1a	99	68.350	ENSECAG00000036306	-	69	68.350	Equus_caballus
ENSAPOG00000017945	polr1a	99	68.350	ENSECAG00000030510	-	67	75.000	Equus_caballus
ENSAPOG00000017945	polr1a	99	68.350	ENSECAG00000010092	POLR1A	67	75.000	Equus_caballus
ENSAPOG00000017945	polr1a	79	77.389	ENSEEUG00000000676	POLR1A	54	77.389	Erinaceus_europaeus
ENSAPOG00000017945	polr1a	99	77.133	ENSELUG00000012769	polr1a	68	76.877	Esox_lucius
ENSAPOG00000017945	polr1a	99	68.182	ENSFCAG00000008966	POLR1A	69	68.182	Felis_catus
ENSAPOG00000017945	polr1a	99	66.477	ENSFALG00000010082	POLR1A	69	67.237	Ficedula_albicollis
ENSAPOG00000017945	polr1a	99	67.227	ENSFDAG00000013726	POLR1A	69	67.227	Fukomys_damarensis
ENSAPOG00000017945	polr1a	99	80.068	ENSFHEG00000005996	polr1a	69	80.153	Fundulus_heteroclitus
ENSAPOG00000017945	polr1a	99	69.573	ENSGMOG00000002230	polr1a	68	69.231	Gadus_morhua
ENSAPOG00000017945	polr1a	99	67.545	ENSGALG00000038160	-	75	67.715	Gallus_gallus
ENSAPOG00000017945	polr1a	99	81.138	ENSGAFG00000015266	polr1a	68	81.037	Gambusia_affinis
ENSAPOG00000017945	polr1a	100	82.299	ENSGACG00000018791	polr1a	69	82.131	Gasterosteus_aculeatus
ENSAPOG00000017945	polr1a	94	72.126	ENSGAGG00000004984	-	96	72.519	Gopherus_agassizii
ENSAPOG00000017945	polr1a	99	67.929	ENSGGOG00000001788	POLR1A	69	67.929	Gorilla_gorilla
ENSAPOG00000017945	polr1a	99	81.552	ENSHBUG00000020021	polr1a	75	81.466	Haplochromis_burtoni
ENSAPOG00000017945	polr1a	99	67.647	ENSHGLG00000006334	POLR1A	69	67.647	Heterocephalus_glaber_female
ENSAPOG00000017945	polr1a	99	67.364	ENSHGLG00100006614	POLR1A	69	67.364	Heterocephalus_glaber_male
ENSAPOG00000017945	polr1a	99	77.436	ENSHCOG00000003345	polr1a	99	73.881	Hippocampus_comes
ENSAPOG00000017945	polr1a	99	73.765	ENSIPUG00000013174	polr1a	69	73.595	Ictalurus_punctatus
ENSAPOG00000017945	polr1a	99	67.568	ENSSTOG00000012580	POLR1A	69	67.424	Ictidomys_tridecemlineatus
ENSAPOG00000017945	polr1a	99	68.448	ENSJJAG00000013113	Polr1a	68	68.448	Jaculus_jaculus
ENSAPOG00000017945	polr1a	99	87.212	ENSKMAG00000007399	polr1a	69	87.212	Kryptolebias_marmoratus
ENSAPOG00000017945	polr1a	91	89.286	ENSLBEG00000015401	polr1a	66	89.286	Labrus_bergylta
ENSAPOG00000017945	polr1a	77	70.607	ENSLACG00000003218	polr1a	100	70.607	Latimeria_chalumnae
ENSAPOG00000017945	polr1a	99	74.112	ENSLOCG00000010881	polr1a	69	73.604	Lepisosteus_oculatus
ENSAPOG00000017945	polr1a	99	67.448	ENSLAFG00000014948	POLR1A	69	67.448	Loxodonta_africana
ENSAPOG00000017945	polr1a	99	68.182	ENSMFAG00000046097	POLR1A	69	67.845	Macaca_fascicularis
ENSAPOG00000017945	polr1a	99	68.266	ENSMMUG00000015815	POLR1A	69	67.929	Macaca_mulatta
ENSAPOG00000017945	polr1a	99	68.182	ENSMNEG00000043313	POLR1A	69	67.845	Macaca_nemestrina
ENSAPOG00000017945	polr1a	99	68.182	ENSMLEG00000042428	POLR1A	69	67.845	Mandrillus_leucophaeus
ENSAPOG00000017945	polr1a	99	87.127	ENSMAMG00000016565	polr1a	69	87.127	Mastacembelus_armatus
ENSAPOG00000017945	polr1a	99	88.416	ENSMZEG00005004915	polr1a	69	88.416	Maylandia_zebra
ENSAPOG00000017945	polr1a	99	67.399	ENSMGAG00000013111	POLR1A	68	67.371	Meleagris_gallopavo
ENSAPOG00000017945	polr1a	98	66.985	ENSMAUG00000008497	Polr1a	66	67.341	Mesocricetus_auratus
ENSAPOG00000017945	polr1a	99	68.013	ENSMICG00000000757	POLR1A	69	68.013	Microcebus_murinus
ENSAPOG00000017945	polr1a	99	67.561	ENSMOCG00000000122	Polr1a	71	67.561	Microtus_ochrogaster
ENSAPOG00000017945	polr1a	99	82.027	ENSMMOG00000010216	polr1a	69	82.027	Mola_mola
ENSAPOG00000017945	polr1a	99	67.758	ENSMODG00000009335	POLR1A	69	67.590	Monodelphis_domestica
ENSAPOG00000017945	polr1a	99	87.245	ENSMALG00000013363	polr1a	69	87.245	Monopterus_albus
ENSAPOG00000017945	polr1a	99	67.309	MGP_CAROLIEiJ_G0028494	Polr1a	99	52.857	Mus_caroli
ENSAPOG00000017945	polr1a	99	66.974	ENSMUSG00000049553	Polr1a	99	52.143	Mus_musculus
ENSAPOG00000017945	polr1a	99	67.393	MGP_PahariEiJ_G0022230	Polr1a	99	53.214	Mus_pahari
ENSAPOG00000017945	polr1a	99	67.142	MGP_SPRETEiJ_G0029499	Polr1a	99	52.143	Mus_spretus
ENSAPOG00000017945	polr1a	99	68.182	ENSMPUG00000009135	POLR1A	69	68.182	Mustela_putorius_furo
ENSAPOG00000017945	polr1a	99	67.586	ENSMLUG00000015723	POLR1A	69	67.586	Myotis_lucifugus
ENSAPOG00000017945	polr1a	99	67.534	ENSNGAG00000017907	Polr1a	69	67.534	Nannospalax_galili
ENSAPOG00000017945	polr1a	99	88.501	ENSNBRG00000000519	polr1a	69	88.501	Neolamprologus_brichardi
ENSAPOG00000017945	polr1a	99	67.340	ENSNLEG00000002264	POLR1A	68	67.088	Nomascus_leucogenys
ENSAPOG00000017945	polr1a	84	78.338	ENSMEUG00000011665	-	58	78.338	Notamacropus_eugenii
ENSAPOG00000017945	polr1a	98	63.916	ENSOPRG00000008269	POLR1A	70	61.752	Ochotona_princeps
ENSAPOG00000017945	polr1a	99	67.479	ENSODEG00000003542	POLR1A	69	67.479	Octodon_degus
ENSAPOG00000017945	polr1a	99	87.838	ENSONIG00000015895	polr1a	70	87.669	Oreochromis_niloticus
ENSAPOG00000017945	polr1a	60	61.277	ENSOANG00000012384	-	100	60.870	Ornithorhynchus_anatinus
ENSAPOG00000017945	polr1a	99	68.013	ENSOCUG00000010138	POLR1A	69	68.013	Oryctolagus_cuniculus
ENSAPOG00000017945	polr1a	99	84.143	ENSORLG00000008753	polr1a	69	84.143	Oryzias_latipes
ENSAPOG00000017945	polr1a	100	81.787	ENSORLG00020020726	polr1a	70	81.787	Oryzias_latipes_hni
ENSAPOG00000017945	polr1a	93	88.298	ENSORLG00015016071	polr1a	66	88.298	Oryzias_latipes_hsok
ENSAPOG00000017945	polr1a	99	67.875	ENSOGAG00000004031	POLR1A	69	67.875	Otolemur_garnettii
ENSAPOG00000017945	polr1a	99	67.647	ENSOARG00000020601	POLR1A	69	67.647	Ovis_aries
ENSAPOG00000017945	polr1a	99	67.761	ENSPPAG00000042450	POLR1A	69	67.761	Pan_paniscus
ENSAPOG00000017945	polr1a	99	68.098	ENSPPRG00000006702	POLR1A	69	68.098	Panthera_pardus
ENSAPOG00000017945	polr1a	99	67.504	ENSPTIG00000018783	POLR1A	69	67.420	Panthera_tigris_altaica
ENSAPOG00000017945	polr1a	99	67.677	ENSPTRG00000012147	POLR1A	69	67.677	Pan_troglodytes
ENSAPOG00000017945	polr1a	99	68.013	ENSPANG00000025908	POLR1A	69	67.677	Papio_anubis
ENSAPOG00000017945	polr1a	99	74.957	ENSPKIG00000005468	polr1a	69	74.851	Paramormyrops_kingsleyae
ENSAPOG00000017945	polr1a	51	70.205	ENSPSIG00000009321	-	50	70.205	Pelodiscus_sinensis
ENSAPOG00000017945	polr1a	79	82.378	ENSPMGG00000009718	polr1a	95	82.035	Periophthalmus_magnuspinnatus
ENSAPOG00000017945	polr1a	99	67.309	ENSPEMG00000022224	Polr1a	69	67.309	Peromyscus_maniculatus_bairdii
ENSAPOG00000017945	polr1a	99	67.750	ENSPCIG00000004222	POLR1A	73	67.500	Phascolarctos_cinereus
ENSAPOG00000017945	polr1a	99	84.380	ENSPFOG00000005025	polr1a	69	84.354	Poecilia_formosa
ENSAPOG00000017945	polr1a	99	84.380	ENSPLAG00000021389	polr1a	69	84.354	Poecilia_latipinna
ENSAPOG00000017945	polr1a	99	80.678	ENSPMEG00000006463	polr1a	69	80.948	Poecilia_mexicana
ENSAPOG00000017945	polr1a	99	84.465	ENSPREG00000002389	polr1a	69	84.439	Poecilia_reticulata
ENSAPOG00000017945	polr1a	99	67.845	ENSPPYG00000012217	POLR1A	69	67.593	Pongo_abelii
ENSAPOG00000017945	polr1a	99	60.265	ENSPCAG00000011582	POLR1A	64	60.512	Procavia_capensis
ENSAPOG00000017945	polr1a	99	68.013	ENSPCOG00000026987	POLR1A	69	68.013	Propithecus_coquereli
ENSAPOG00000017945	polr1a	93	68.575	ENSPVAG00000012674	POLR1A	64	69.127	Pteropus_vampyrus
ENSAPOG00000017945	polr1a	99	88.245	ENSPNYG00000000026	polr1a	69	88.245	Pundamilia_nyererei
ENSAPOG00000017945	polr1a	99	73.512	ENSPNAG00000019223	polr1a	70	73.512	Pygocentrus_nattereri
ENSAPOG00000017945	polr1a	99	67.477	ENSRNOG00000009545	Polr1a	69	67.477	Rattus_norvegicus
ENSAPOG00000017945	polr1a	99	68.098	ENSRBIG00000028335	POLR1A	69	67.761	Rhinopithecus_bieti
ENSAPOG00000017945	polr1a	99	68.098	ENSRROG00000031473	POLR1A	69	67.761	Rhinopithecus_roxellana
ENSAPOG00000017945	polr1a	99	37.970	YOR341W	RPA190	69	37.620	Saccharomyces_cerevisiae
ENSAPOG00000017945	polr1a	99	67.340	ENSSBOG00000030262	POLR1A	69	67.340	Saimiri_boliviensis_boliviensis
ENSAPOG00000017945	polr1a	99	60.815	ENSSHAG00000014739	POLR1A	69	60.815	Sarcophilus_harrisii
ENSAPOG00000017945	polr1a	99	73.702	ENSSFOG00015019716	polr1a	69	73.362	Scleropages_formosus
ENSAPOG00000017945	polr1a	99	86.786	ENSSMAG00000014342	polr1a	69	86.786	Scophthalmus_maximus
ENSAPOG00000017945	polr1a	99	89.702	ENSSDUG00000014631	polr1a	69	89.702	Seriola_dumerili
ENSAPOG00000017945	polr1a	99	84.304	ENSSLDG00000024095	polr1a	70	83.362	Seriola_lalandi_dorsalis
ENSAPOG00000017945	polr1a	79	97.561	ENSSARG00000003136	-	51	97.561	Sorex_araneus
ENSAPOG00000017945	polr1a	99	69.251	ENSSPUG00000004215	POLR1A	72	69.165	Sphenodon_punctatus
ENSAPOG00000017945	polr1a	92	92.792	ENSSPAG00000016341	polr1a	94	92.677	Stegastes_partitus
ENSAPOG00000017945	polr1a	99	67.677	ENSSSCG00000008226	POLR1A	83	67.677	Sus_scrofa
ENSAPOG00000017945	polr1a	99	65.949	ENSTGUG00000010704	POLR1A	68	67.647	Taeniopygia_guttata
ENSAPOG00000017945	polr1a	99	81.957	ENSTRUG00000002210	polr1a	97	79.384	Takifugu_rubripes
ENSAPOG00000017945	polr1a	99	78.243	ENSTNIG00000010116	polr1a	70	78.243	Tetraodon_nigroviridis
ENSAPOG00000017945	polr1a	97	66.898	ENSTTRG00000008597	POLR1A	67	66.811	Tursiops_truncatus
ENSAPOG00000017945	polr1a	62	71.981	ENSUAMG00000012158	-	52	71.981	Ursus_americanus
ENSAPOG00000017945	polr1a	99	67.260	ENSUMAG00000006700	POLR1A	97	68.511	Ursus_maritimus
ENSAPOG00000017945	polr1a	99	67.875	ENSVVUG00000001245	POLR1A	69	67.875	Vulpes_vulpes
ENSAPOG00000017945	polr1a	99	64.686	ENSXETG00000001952	polr1a	83	64.603	Xenopus_tropicalis
ENSAPOG00000017945	polr1a	59	85.009	ENSXCOG00000013384	polr1a	92	85.321	Xiphophorus_couchianus
ENSAPOG00000017945	polr1a	99	83.959	ENSXMAG00000004032	polr1a	69	83.959	Xiphophorus_maculatus