EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000018093 (Gene tree)
Gene ID: 110952024
Gene Symbol: srl
Alias: im:6899248|wu:fb94b10|zgc:153844
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 15380 bases
Position: chrMVNR01000222.1:355281-370660
Accession: 110952024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000031086	MMR_HSR1	PF01926.23	1.7e-08	1	1
ENSAPOP00000031078	MMR_HSR1	PF01926.23	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000023702	-	1335	-	ENSAPOP00000031086	444 (aa)	-	-
ENSAPOT00000023772	-	4129	XM_022195338	ENSAPOP00000031078	471 (aa)	XP_022051030	UPI000B909F5E

Gene Model

Click here to download ENSAPOG00000018093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000018093's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000018093	srl	93	31.265	ENSAPOG00000004967	ehd4	65	31.265
ENSAPOG00000018093	srl	99	76.871	ENSAPOG00000012432	SRL	98	76.923
ENSAPOG00000018093	srl	87	31.959	ENSAPOG00000013440	ehd1a	70	31.959
ENSAPOG00000018093	srl	56	38.645	ENSAPOG00000021608	-	77	31.944
ENSAPOG00000018093	srl	98	32.579	ENSAPOG00000012705	ehd2b	77	32.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000018093	srl	100	82.658	ENSG00000185739	SRL	99	83.488	Homo_sapiens
ENSAPOG00000018093	srl	100	82.658	ENSAMEG00000010862	SRL	52	80.994	Ailuropoda_melanoleuca
ENSAPOG00000018093	srl	99	97.279	ENSACIG00000015799	srl	100	97.118	Amphilophus_citrinellus
ENSAPOG00000018093	srl	100	75.225	ENSACIG00000015419	SRL	99	75.225	Amphilophus_citrinellus
ENSAPOG00000018093	srl	98	99.770	ENSAOCG00000007574	srl	100	99.770	Amphiprion_ocellaris
ENSAPOG00000018093	srl	99	77.149	ENSAOCG00000017049	SRL	100	75.435	Amphiprion_ocellaris
ENSAPOG00000018093	srl	100	99.788	ENSAPEG00000006911	srl	100	99.788	Amphiprion_percula
ENSAPOG00000018093	srl	99	73.696	ENSAPEG00000006533	SRL	100	72.391	Amphiprion_percula
ENSAPOG00000018093	srl	99	76.432	ENSATEG00000009643	SRL	52	76.754	Anabas_testudineus
ENSAPOG00000018093	srl	100	97.452	ENSATEG00000024315	srl	100	97.452	Anabas_testudineus
ENSAPOG00000018093	srl	99	81.718	ENSACAG00000016380	SRL	89	79.098	Anolis_carolinensis
ENSAPOG00000018093	srl	100	96.815	ENSACLG00000027685	srl	100	96.815	Astatotilapia_calliptera
ENSAPOG00000018093	srl	99	74.449	ENSACLG00000024674	SRL	58	73.291	Astatotilapia_calliptera
ENSAPOG00000018093	srl	94	78.998	ENSAMXG00000038693	SRL	100	75.055	Astyanax_mexicanus
ENSAPOG00000018093	srl	99	93.864	ENSAMXG00000018789	srl	92	92.340	Astyanax_mexicanus
ENSAPOG00000018093	srl	99	83.521	ENSBTAG00000001078	SRL	58	82.237	Bos_taurus
ENSAPOG00000018093	srl	99	82.993	ENSCJAG00000019750	SRL	100	80.338	Callithrix_jacchus
ENSAPOG00000018093	srl	100	82.658	ENSCAFG00000019233	SRL	85	80.786	Canis_familiaris
ENSAPOG00000018093	srl	100	82.658	ENSCAFG00020025024	SRL	56	81.678	Canis_lupus_dingo
ENSAPOG00000018093	srl	99	83.521	ENSCHIG00000017927	SRL	57	82.637	Capra_hircus
ENSAPOG00000018093	srl	100	83.333	ENSTSYG00000007919	SRL	99	84.186	Carlito_syrichta
ENSAPOG00000018093	srl	100	83.108	ENSCPOG00000012643	SRL	100	80.508	Cavia_porcellus
ENSAPOG00000018093	srl	99	77.551	ENSCCAG00000032646	SRL	100	84.697	Cebus_capucinus
ENSAPOG00000018093	srl	100	82.658	ENSCATG00000032227	-	100	80.338	Cercocebus_atys
ENSAPOG00000018093	srl	100	83.333	ENSCLAG00000016242	SRL	100	80.720	Chinchilla_lanigera
ENSAPOG00000018093	srl	87	86.234	ENSCHOG00000001618	SRL	52	86.234	Choloepus_hoffmanni
ENSAPOG00000018093	srl	99	85.751	ENSCPBG00000026371	SRL	99	78.675	Chrysemys_picta_bellii
ENSAPOG00000018093	srl	93	60.337	ENSCING00000005231	-	93	60.671	Ciona_intestinalis
ENSAPOG00000018093	srl	100	82.658	ENSCANG00000035872	SRL	99	83.488	Colobus_angolensis_palliatus
ENSAPOG00000018093	srl	100	84.009	ENSCGRG00001016630	Srl	100	81.144	Cricetulus_griseus_chok1gshd
ENSAPOG00000018093	srl	100	84.009	ENSCGRG00000005458	Srl	100	81.144	Cricetulus_griseus_crigri
ENSAPOG00000018093	srl	99	76.018	ENSCSEG00000011866	SRL	94	73.348	Cynoglossus_semilaevis
ENSAPOG00000018093	srl	100	95.541	ENSCSEG00000016151	srl	100	95.541	Cynoglossus_semilaevis
ENSAPOG00000018093	srl	100	94.480	ENSCVAG00000003513	srl	100	94.480	Cyprinodon_variegatus
ENSAPOG00000018093	srl	99	76.718	ENSCVAG00000022465	SRL	62	75.214	Cyprinodon_variegatus
ENSAPOG00000018093	srl	85	78.125	ENSDARG00000112959	CABZ01072309.1	100	78.125	Danio_rerio
ENSAPOG00000018093	srl	99	93.424	ENSDARG00000104587	srl	100	91.083	Danio_rerio
ENSAPOG00000018093	srl	100	83.108	ENSDNOG00000011643	SRL	54	82.561	Dasypus_novemcinctus
ENSAPOG00000018093	srl	100	83.559	ENSDORG00000014807	Srl	100	81.144	Dipodomys_ordii
ENSAPOG00000018093	srl	84	65.775	ENSEBUG00000015937	srl	94	65.775	Eptatretus_burgeri
ENSAPOG00000018093	srl	99	83.409	ENSEASG00005000942	SRL	55	81.798	Equus_asinus_asinus
ENSAPOG00000018093	srl	99	83.070	ENSECAG00000024219	SRL	99	80.932	Equus_caballus
ENSAPOG00000018093	srl	99	87.033	ENSELUG00000015616	srl	100	85.451	Esox_lucius
ENSAPOG00000018093	srl	99	82.766	ENSFCAG00000022075	SRL	100	79.915	Felis_catus
ENSAPOG00000018093	srl	99	82.766	ENSFALG00000004328	SRL	64	82.040	Ficedula_albicollis
ENSAPOG00000018093	srl	100	84.009	ENSFDAG00000006199	SRL	100	81.568	Fukomys_damarensis
ENSAPOG00000018093	srl	100	94.480	ENSFHEG00000011239	srl	100	94.480	Fundulus_heteroclitus
ENSAPOG00000018093	srl	99	76.644	ENSFHEG00000011854	SRL	99	77.027	Fundulus_heteroclitus
ENSAPOG00000018093	srl	99	90.708	ENSGMOG00000014954	srl	100	90.749	Gadus_morhua
ENSAPOG00000018093	srl	99	82.993	ENSGALG00000038884	SRL	99	80.679	Gallus_gallus
ENSAPOG00000018093	srl	100	94.904	ENSGAFG00000000010	srl	100	94.904	Gambusia_affinis
ENSAPOG00000018093	srl	99	77.551	ENSGAFG00000016984	SRL	100	77.060	Gambusia_affinis
ENSAPOG00000018093	srl	99	94.248	ENSGACG00000011332	srl	100	94.505	Gasterosteus_aculeatus
ENSAPOG00000018093	srl	100	82.658	ENSGGOG00000011312	-	100	80.127	Gorilla_gorilla
ENSAPOG00000018093	srl	99	74.890	ENSHBUG00000015710	SRL	58	73.718	Haplochromis_burtoni
ENSAPOG00000018093	srl	100	96.815	ENSHBUG00000007581	srl	100	96.815	Haplochromis_burtoni
ENSAPOG00000018093	srl	100	83.784	ENSHGLG00000015271	SRL	100	81.144	Heterocephalus_glaber_female
ENSAPOG00000018093	srl	100	83.784	ENSHGLG00100019378	SRL	100	81.144	Heterocephalus_glaber_male
ENSAPOG00000018093	srl	100	95.763	ENSHCOG00000008687	srl	99	96.652	Hippocampus_comes
ENSAPOG00000018093	srl	99	74.834	ENSHCOG00000001012	SRL	50	74.945	Hippocampus_comes
ENSAPOG00000018093	srl	98	70.345	ENSIPUG00000011609	SRL	95	70.413	Ictalurus_punctatus
ENSAPOG00000018093	srl	99	92.971	ENSIPUG00000012513	srl	100	91.507	Ictalurus_punctatus
ENSAPOG00000018093	srl	100	83.559	ENSSTOG00000021151	-	100	80.720	Ictidomys_tridecemlineatus
ENSAPOG00000018093	srl	100	84.009	ENSJJAG00000016400	Srl	100	81.780	Jaculus_jaculus
ENSAPOG00000018093	srl	98	95.011	ENSKMAG00000014115	srl	95	95.011	Kryptolebias_marmoratus
ENSAPOG00000018093	srl	99	77.098	ENSKMAG00000019537	SRL	100	77.324	Kryptolebias_marmoratus
ENSAPOG00000018093	srl	100	95.754	ENSLBEG00000026643	srl	100	95.754	Labrus_bergylta
ENSAPOG00000018093	srl	99	75.792	ENSLBEG00000013811	SRL	99	74.510	Labrus_bergylta
ENSAPOG00000018093	srl	99	85.261	ENSLACG00000002825	SRL	100	84.292	Latimeria_chalumnae
ENSAPOG00000018093	srl	99	90.249	ENSLOCG00000002644	srl	99	87.580	Lepisosteus_oculatus
ENSAPOG00000018093	srl	99	82.993	ENSLAFG00000006329	SRL	52	81.898	Loxodonta_africana
ENSAPOG00000018093	srl	97	83.488	ENSMFAG00000037383	SRL	99	83.488	Macaca_fascicularis
ENSAPOG00000018093	srl	100	82.658	ENSMNEG00000019236	-	97	81.223	Macaca_nemestrina
ENSAPOG00000018093	srl	100	75.676	ENSMLEG00000032156	SRL	100	73.784	Mandrillus_leucophaeus
ENSAPOG00000018093	srl	99	75.771	ENSMAMG00000013756	SRL	53	75.991	Mastacembelus_armatus
ENSAPOG00000018093	srl	99	97.959	ENSMAMG00000023322	srl	99	95.503	Mastacembelus_armatus
ENSAPOG00000018093	srl	99	74.670	ENSMZEG00005004010	SRL	59	73.504	Maylandia_zebra
ENSAPOG00000018093	srl	100	96.815	ENSMZEG00005004548	srl	100	96.815	Maylandia_zebra
ENSAPOG00000018093	srl	99	82.993	ENSMGAG00000009342	SRL	97	83.029	Meleagris_gallopavo
ENSAPOG00000018093	srl	99	83.447	ENSMICG00000032307	SRL	100	80.550	Microcebus_murinus
ENSAPOG00000018093	srl	100	83.333	ENSMOCG00000008208	Srl	100	80.297	Microtus_ochrogaster
ENSAPOG00000018093	srl	99	96.825	ENSMMOG00000013970	srl	100	96.667	Mola_mola
ENSAPOG00000018093	srl	99	74.725	ENSMMOG00000021572	SRL	99	74.945	Mola_mola
ENSAPOG00000018093	srl	99	84.318	ENSMODG00000016380	-	51	83.370	Monodelphis_domestica
ENSAPOG00000018093	srl	94	77.088	ENSMALG00000000670	SRL	98	77.088	Monopterus_albus
ENSAPOG00000018093	srl	100	95.329	ENSMALG00000005039	srl	100	95.329	Monopterus_albus
ENSAPOG00000018093	srl	100	84.459	MGP_CAROLIEiJ_G0020400	Srl	100	82.203	Mus_caroli
ENSAPOG00000018093	srl	100	84.459	ENSMUSG00000022519	Srl	100	82.203	Mus_musculus
ENSAPOG00000018093	srl	100	84.459	MGP_SPRETEiJ_G0021294	Srl	100	82.203	Mus_spretus
ENSAPOG00000018093	srl	100	82.658	ENSMPUG00000015025	SRL	55	81.898	Mustela_putorius_furo
ENSAPOG00000018093	srl	99	83.673	ENSMLUG00000030733	SRL	58	82.314	Myotis_lucifugus
ENSAPOG00000018093	srl	100	84.234	ENSNGAG00000019741	Srl	100	81.780	Nannospalax_galili
ENSAPOG00000018093	srl	100	96.391	ENSNBRG00000023775	srl	100	96.391	Neolamprologus_brichardi
ENSAPOG00000018093	srl	99	74.670	ENSNBRG00000002422	SRL	56	76.157	Neolamprologus_brichardi
ENSAPOG00000018093	srl	100	77.027	ENSNLEG00000029051	SRL	100	74.630	Nomascus_leucogenys
ENSAPOG00000018093	srl	100	77.252	ENSOPRG00000000477	-	53	76.600	Ochotona_princeps
ENSAPOG00000018093	srl	100	83.559	ENSODEG00000013256	SRL	100	80.932	Octodon_degus
ENSAPOG00000018093	srl	99	97.052	ENSONIG00000005192	srl	100	94.410	Oreochromis_niloticus
ENSAPOG00000018093	srl	99	82.993	ENSOCUG00000025140	SRL	50	81.223	Oryctolagus_cuniculus
ENSAPOG00000018093	srl	99	75.227	ENSORLG00000015064	SRL	97	75.395	Oryzias_latipes
ENSAPOG00000018093	srl	100	95.754	ENSORLG00000008291	srl	97	95.754	Oryzias_latipes
ENSAPOG00000018093	srl	99	75.455	ENSORLG00020018173	SRL	97	75.621	Oryzias_latipes_hni
ENSAPOG00000018093	srl	100	96.178	ENSORLG00020019784	srl	85	96.178	Oryzias_latipes_hni
ENSAPOG00000018093	srl	99	75.455	ENSORLG00015019063	SRL	97	75.621	Oryzias_latipes_hsok
ENSAPOG00000018093	srl	100	96.178	ENSORLG00015009342	srl	97	96.178	Oryzias_latipes_hsok
ENSAPOG00000018093	srl	99	73.951	ENSOMEG00000005682	SRL	53	74.398	Oryzias_melastigma
ENSAPOG00000018093	srl	100	95.541	ENSOMEG00000010006	srl	100	95.541	Oryzias_melastigma
ENSAPOG00000018093	srl	99	82.993	ENSOGAG00000029266	SRL	56	81.579	Otolemur_garnettii
ENSAPOG00000018093	srl	99	83.521	ENSOARG00000003074	SRL	56	83.521	Ovis_aries
ENSAPOG00000018093	srl	100	82.658	ENSPPAG00000024919	-	99	83.488	Pan_paniscus
ENSAPOG00000018093	srl	99	82.766	ENSPPRG00000010274	SRL	99	83.256	Panthera_pardus
ENSAPOG00000018093	srl	99	82.766	ENSPTIG00000015162	SRL	99	83.256	Panthera_tigris_altaica
ENSAPOG00000018093	srl	100	82.658	ENSPTRG00000007712	SRL	99	83.488	Pan_troglodytes
ENSAPOG00000018093	srl	100	82.658	ENSPANG00000013804	SRL	98	81.223	Papio_anubis
ENSAPOG00000018093	srl	99	93.197	ENSPKIG00000006405	srl	100	91.561	Paramormyrops_kingsleyae
ENSAPOG00000018093	srl	99	80.272	ENSPKIG00000024974	SRL	94	78.344	Paramormyrops_kingsleyae
ENSAPOG00000018093	srl	99	83.220	ENSPSIG00000008586	SRL	50	83.070	Pelodiscus_sinensis
ENSAPOG00000018093	srl	99	95.238	ENSPMGG00000021081	srl	99	93.013	Periophthalmus_magnuspinnatus
ENSAPOG00000018093	srl	99	75.909	ENSPMGG00000023505	-	99	75.909	Periophthalmus_magnuspinnatus
ENSAPOG00000018093	srl	100	83.559	ENSPEMG00000015842	Srl	100	80.932	Peromyscus_maniculatus_bairdii
ENSAPOG00000018093	srl	95	68.349	ENSPMAG00000004786	srl	99	68.349	Petromyzon_marinus
ENSAPOG00000018093	srl	99	83.864	ENSPCIG00000012128	SRL	99	82.927	Phascolarctos_cinereus
ENSAPOG00000018093	srl	100	92.754	ENSPFOG00000011408	srl	98	90.377	Poecilia_formosa
ENSAPOG00000018093	srl	99	76.190	ENSPLAG00000002932	SRL	100	75.724	Poecilia_latipinna
ENSAPOG00000018093	srl	99	95.692	ENSPLAG00000008017	srl	100	93.709	Poecilia_latipinna
ENSAPOG00000018093	srl	99	74.670	ENSPMEG00000005890	SRL	61	73.504	Poecilia_mexicana
ENSAPOG00000018093	srl	100	95.117	ENSPMEG00000006745	srl	100	93.709	Poecilia_mexicana
ENSAPOG00000018093	srl	99	77.098	ENSPREG00000000315	SRL	100	76.837	Poecilia_reticulata
ENSAPOG00000018093	srl	100	95.117	ENSPREG00000007751	srl	99	95.556	Poecilia_reticulata
ENSAPOG00000018093	srl	94	84.964	ENSPPYG00000007053	SRL	98	84.964	Pongo_abelii
ENSAPOG00000018093	srl	99	83.636	ENSPCAG00000003378	-	50	83.636	Procavia_capensis
ENSAPOG00000018093	srl	99	83.447	ENSPCOG00000023135	SRL	99	83.953	Propithecus_coquereli
ENSAPOG00000018093	srl	100	83.108	ENSPVAG00000006586	SRL	56	82.561	Pteropus_vampyrus
ENSAPOG00000018093	srl	100	96.603	ENSPNYG00000001200	srl	100	96.603	Pundamilia_nyererei
ENSAPOG00000018093	srl	99	74.670	ENSPNYG00000003423	SRL	58	73.504	Pundamilia_nyererei
ENSAPOG00000018093	srl	99	93.651	ENSPNAG00000023106	srl	100	91.932	Pygocentrus_nattereri
ENSAPOG00000018093	srl	99	75.964	ENSPNAG00000007361	-	91	76.190	Pygocentrus_nattereri
ENSAPOG00000018093	srl	100	84.009	ENSRNOG00000005269	Srl	50	82.895	Rattus_norvegicus
ENSAPOG00000018093	srl	99	82.993	ENSRBIG00000042358	SRL	51	81.798	Rhinopithecus_bieti
ENSAPOG00000018093	srl	99	82.993	ENSSBOG00000029273	SRL	100	80.338	Saimiri_boliviensis_boliviensis
ENSAPOG00000018093	srl	99	84.091	ENSSHAG00000011715	-	51	83.111	Sarcophilus_harrisii
ENSAPOG00000018093	srl	100	77.477	ENSSFOG00015021327	SRL	50	77.455	Scleropages_formosus
ENSAPOG00000018093	srl	99	93.197	ENSSFOG00015009773	srl	99	91.026	Scleropages_formosus
ENSAPOG00000018093	srl	100	96.391	ENSSMAG00000016274	srl	100	96.391	Scophthalmus_maximus
ENSAPOG00000018093	srl	99	75.165	ENSSMAG00000002232	SRL	50	75.385	Scophthalmus_maximus
ENSAPOG00000018093	srl	99	97.279	ENSSDUG00000010808	srl	98	97.523	Seriola_dumerili
ENSAPOG00000018093	srl	99	77.232	ENSSDUG00000009161	SRL	99	77.333	Seriola_dumerili
ENSAPOG00000018093	srl	99	76.974	ENSSLDG00000014601	SRL	100	77.632	Seriola_lalandi_dorsalis
ENSAPOG00000018093	srl	100	96.603	ENSSLDG00000022024	srl	100	96.603	Seriola_lalandi_dorsalis
ENSAPOG00000018093	srl	99	83.710	ENSSPUG00000016859	SRL	99	82.522	Sphenodon_punctatus
ENSAPOG00000018093	srl	99	77.778	ENSSPAG00000014254	SRL	98	78.005	Stegastes_partitus
ENSAPOG00000018093	srl	100	98.729	ENSSPAG00000019105	srl	100	98.729	Stegastes_partitus
ENSAPOG00000018093	srl	99	83.182	ENSSSCG00000007949	SRL	99	82.844	Sus_scrofa
ENSAPOG00000018093	srl	82	85.912	ENSTGUG00000016121	-	100	85.912	Taeniopygia_guttata
ENSAPOG00000018093	srl	99	82.993	ENSTGUG00000003951	-	99	82.262	Taeniopygia_guttata
ENSAPOG00000018093	srl	100	96.603	ENSTRUG00000006005	srl	100	96.603	Takifugu_rubripes
ENSAPOG00000018093	srl	94	78.520	ENSTRUG00000013310	SRL	55	78.520	Takifugu_rubripes
ENSAPOG00000018093	srl	100	95.966	ENSTNIG00000009739	srl	100	95.966	Tetraodon_nigroviridis
ENSAPOG00000018093	srl	100	82.658	ENSUAMG00000005701	SRL	55	82.658	Ursus_americanus
ENSAPOG00000018093	srl	100	82.658	ENSUMAG00000002574	SRL	55	82.658	Ursus_maritimus
ENSAPOG00000018093	srl	100	82.658	ENSVVUG00000016331	-	50	80.963	Vulpes_vulpes
ENSAPOG00000018093	srl	99	82.540	ENSXETG00000017313	srl	99	81.637	Xenopus_tropicalis
ENSAPOG00000018093	srl	99	77.324	ENSXCOG00000014584	SRL	99	76.889	Xiphophorus_couchianus
ENSAPOG00000018093	srl	95	95.487	ENSXCOG00000010424	srl	97	95.487	Xiphophorus_couchianus
ENSAPOG00000018093	srl	99	74.890	ENSXMAG00000027598	SRL	64	74.145	Xiphophorus_maculatus
ENSAPOG00000018093	srl	100	94.904	ENSXMAG00000004625	srl	95	94.904	Xiphophorus_maculatus