EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000018216 (Gene tree)
Gene ID: 110947893
Gene Symbol: -
Alias: -
Full Name: probable tRNA pseudouridine synthase 2
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 3155 bases
Position: chrMVNR01000060.1:232886-236040
Accession: 110947893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000015242	TruB_N	PF01509.18	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000023884	-	627	XM_022189221	ENSAPOP00000015242	208 (aa)	XP_022044913	-

Gene Model

Click here to download ENSAPOG00000018216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000018216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000018216	-	87	98.895	ENSAPOG00000018284	-	68	98.895
ENSAPOG00000018216	-	92	94.792	ENSAPOG00000015733	trub2	68	94.792

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000018216	-	86	75.000	ENSACIG00000016500	trub2	53	75.000	Amphilophus_citrinellus
ENSAPOG00000018216	-	97	86.567	ENSAOCG00000002330	trub2	59	86.567	Amphiprion_ocellaris
ENSAPOG00000018216	-	97	87.065	ENSAPEG00000013177	trub2	59	87.065	Amphiprion_percula
ENSAPOG00000018216	-	90	68.783	ENSACLG00000010793	trub2	57	68.783	Astatotilapia_calliptera
ENSAPOG00000018216	-	61	59.055	ENSBTAG00000055269	-	57	59.055	Bos_taurus
ENSAPOG00000018216	-	89	59.358	ENSCSEG00000001331	trub2	56	59.358	Cynoglossus_semilaevis
ENSAPOG00000018216	-	80	70.659	ENSCVAG00000009901	trub2	50	70.659	Cyprinodon_variegatus
ENSAPOG00000018216	-	84	32.258	ENSDNOG00000043967	-	56	32.258	Dasypus_novemcinctus
ENSAPOG00000018216	-	81	59.412	ENSFHEG00000014655	trub2	53	59.412	Fundulus_heteroclitus
ENSAPOG00000018216	-	72	65.772	ENSGMOG00000000981	trub2	57	65.772	Gadus_morhua
ENSAPOG00000018216	-	85	70.225	ENSGAFG00000010107	trub2	50	70.857	Gambusia_affinis
ENSAPOG00000018216	-	85	70.455	ENSGACG00000001476	trub2	53	70.455	Gasterosteus_aculeatus
ENSAPOG00000018216	-	90	69.841	ENSHBUG00000022384	trub2	57	69.841	Haplochromis_burtoni
ENSAPOG00000018216	-	81	73.529	ENSKMAG00000007861	trub2	51	73.529	Kryptolebias_marmoratus
ENSAPOG00000018216	-	88	63.736	ENSLBEG00000000907	trub2	54	63.736	Labrus_bergylta
ENSAPOG00000018216	-	72	58.667	ENSLOCG00000000885	trub2	50	58.667	Lepisosteus_oculatus
ENSAPOG00000018216	-	90	69.312	ENSMZEG00005016018	trub2	57	69.312	Maylandia_zebra
ENSAPOG00000018216	-	61	61.111	ENSMGAG00000003894	TRUB2	63	61.111	Meleagris_gallopavo
ENSAPOG00000018216	-	86	67.598	ENSMMOG00000021674	trub2	52	67.598	Mola_mola
ENSAPOG00000018216	-	95	69.192	ENSMALG00000021231	trub2	56	69.192	Monopterus_albus
ENSAPOG00000018216	-	90	69.841	ENSNBRG00000016294	trub2	57	69.841	Neolamprologus_brichardi
ENSAPOG00000018216	-	81	48.276	ENSOPRG00000001981	TRUB2	52	48.276	Ochotona_princeps
ENSAPOG00000018216	-	85	74.576	ENSONIG00000004230	trub2	52	74.576	Oreochromis_niloticus
ENSAPOG00000018216	-	78	73.780	ENSOMEG00000006702	trub2	50	73.780	Oryzias_melastigma
ENSAPOG00000018216	-	59	60.656	ENSOARG00000003785	-	50	59.843	Ovis_aries
ENSAPOG00000018216	-	72	51.678	ENSPSIG00000015701	TRUB2	50	51.678	Pelodiscus_sinensis
ENSAPOG00000018216	-	83	64.535	ENSPMGG00000010206	trub2	54	64.535	Periophthalmus_magnuspinnatus
ENSAPOG00000018216	-	86	65.934	ENSPLAG00000010484	trub2	51	66.484	Poecilia_latipinna
ENSAPOG00000018216	-	85	67.222	ENSPMEG00000012913	trub2	52	67.222	Poecilia_mexicana
ENSAPOG00000018216	-	85	67.222	ENSPREG00000002549	trub2	52	67.778	Poecilia_reticulata
ENSAPOG00000018216	-	90	69.312	ENSPNYG00000013666	trub2	57	69.312	Pundamilia_nyererei
ENSAPOG00000018216	-	94	67.179	ENSSDUG00000016928	trub2	55	67.179	Seriola_dumerili
ENSAPOG00000018216	-	93	67.692	ENSSLDG00000024701	trub2	58	67.692	Seriola_lalandi_dorsalis
ENSAPOG00000018216	-	88	79.891	ENSSPAG00000017865	trub2	53	79.891	Stegastes_partitus
ENSAPOG00000018216	-	72	53.691	ENSTGUG00000003704	TRUB2	57	53.691	Taeniopygia_guttata
ENSAPOG00000018216	-	85	69.318	ENSTRUG00000015499	trub2	50	69.318	Takifugu_rubripes
ENSAPOG00000018216	-	75	71.975	ENSTNIG00000014721	trub2	50	71.975	Tetraodon_nigroviridis
ENSAPOG00000018216	-	61	57.480	ENSTBEG00000000586	TRUB2	56	57.480	Tupaia_belangeri
ENSAPOG00000018216	-	97	44.175	ENSUAMG00000020276	TRUB2	59	44.175	Ursus_americanus
ENSAPOG00000018216	-	97	44.175	ENSUMAG00000022051	TRUB2	59	44.175	Ursus_maritimus
ENSAPOG00000018216	-	85	68.539	ENSXCOG00000008759	trub2	51	68.539	Xiphophorus_couchianus
ENSAPOG00000018216	-	85	67.416	ENSXMAG00000015478	trub2	51	67.416	Xiphophorus_maculatus