EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000018234 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 7338 bases
Position: chrMVNR01001671.1:37380-44717
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000015233	zf-C2H2	PF00096.26	5.6e-13	1	2
ENSAPOP00000015233	zf-C2H2	PF00096.26	5.6e-13	2	2
ENSAPOP00000015225	zf-C2H2	PF00096.26	1.8e-12	1	2
ENSAPOP00000015225	zf-C2H2	PF00096.26	1.8e-12	2	2
ENSAPOP00000015225	zf-met	PF12874.7	3.6e-07	1	1
ENSAPOP00000015233	zf-met	PF12874.7	3.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000023974	-	945	-	ENSAPOP00000015233	314 (aa)	-	-
ENSAPOT00000023879	-	921	-	ENSAPOP00000015225	306 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000018234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000018234's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000018234	-	100	67.708	ENSAPOG00000016051	prdm12b	100	67.708
ENSAPOG00000018234	-	50	39.286	ENSAPOG00000008386	-	77	41.892

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000018234	-	93	66.570	ENSG00000130711	PRDM12	99	62.205	Homo_sapiens
ENSAPOG00000018234	-	92	65.579	ENSAMEG00000016234	PRDM12	99	67.284	Ailuropoda_melanoleuca
ENSAPOG00000018234	-	100	72.135	ENSACIG00000005193	-	100	72.135	Amphilophus_citrinellus
ENSAPOG00000018234	-	100	68.700	ENSACIG00000019578	prdm12b	100	68.966	Amphilophus_citrinellus
ENSAPOG00000018234	-	100	67.895	ENSAOCG00000015040	prdm12b	100	67.895	Amphiprion_ocellaris
ENSAPOG00000018234	-	100	67.546	ENSAPEG00000015092	prdm12b	100	67.546	Amphiprion_percula
ENSAPOG00000018234	-	100	67.939	ENSAPEG00000022849	-	99	67.939	Amphiprion_percula
ENSAPOG00000018234	-	100	76.640	ENSATEG00000014595	-	100	76.378	Anabas_testudineus
ENSAPOG00000018234	-	96	65.439	ENSANAG00000020616	PRDM12	99	65.156	Aotus_nancymaae
ENSAPOG00000018234	-	100	69.424	ENSACLG00000007631	-	100	69.424	Astatotilapia_calliptera
ENSAPOG00000018234	-	100	63.830	ENSACLG00000011876	prdm12b	100	63.830	Astatotilapia_calliptera
ENSAPOG00000018234	-	100	64.247	ENSAMXG00000008540	PRDM12	100	63.978	Astyanax_mexicanus
ENSAPOG00000018234	-	100	65.873	ENSAMXG00000033665	prdm12b	100	66.138	Astyanax_mexicanus
ENSAPOG00000018234	-	93	66.860	ENSBTAG00000023797	PRDM12	99	64.560	Bos_taurus
ENSAPOG00000018234	-	93	66.570	ENSCJAG00000020540	PRDM12	99	63.369	Callithrix_jacchus
ENSAPOG00000018234	-	80	67.586	ENSCAFG00000023076	PRDM12	95	65.495	Canis_familiaris
ENSAPOG00000018234	-	93	66.860	ENSCAFG00020024046	PRDM12	99	62.963	Canis_lupus_dingo
ENSAPOG00000018234	-	93	66.860	ENSCHIG00000025005	PRDM12	99	63.298	Capra_hircus
ENSAPOG00000018234	-	88	66.055	ENSCPOG00000005901	PRDM12	95	66.134	Cavia_porcellus
ENSAPOG00000018234	-	93	66.570	ENSCCAG00000037485	PRDM12	99	63.736	Cebus_capucinus
ENSAPOG00000018234	-	93	66.570	ENSCATG00000020327	PRDM12	99	63.736	Cercocebus_atys
ENSAPOG00000018234	-	93	65.698	ENSCLAG00000005499	PRDM12	89	67.077	Chinchilla_lanigera
ENSAPOG00000018234	-	93	66.570	ENSCSAG00000014756	PRDM12	99	62.698	Chlorocebus_sabaeus
ENSAPOG00000018234	-	100	67.120	ENSCPBG00000022628	PRDM12	99	66.757	Chrysemys_picta_bellii
ENSAPOG00000018234	-	93	66.860	ENSCGRG00001015005	Prdm12	99	64.011	Cricetulus_griseus_chok1gshd
ENSAPOG00000018234	-	100	72.093	ENSCVAG00000000944	-	100	72.351	Cyprinodon_variegatus
ENSAPOG00000018234	-	100	66.400	ENSCVAG00000017166	prdm12b	100	66.933	Cyprinodon_variegatus
ENSAPOG00000018234	-	100	67.733	ENSDARG00000007430	prdm12b	100	67.467	Danio_rerio
ENSAPOG00000018234	-	93	66.377	ENSDNOG00000042302	PRDM12	99	63.032	Dasypus_novemcinctus
ENSAPOG00000018234	-	90	55.162	ENSEBUG00000016780	prdm12b	76	54.142	Eptatretus_burgeri
ENSAPOG00000018234	-	97	65.634	ENSEASG00005008472	PRDM12	99	63.934	Equus_asinus_asinus
ENSAPOG00000018234	-	97	65.634	ENSECAG00000005933	PRDM12	99	63.934	Equus_caballus
ENSAPOG00000018234	-	100	66.223	ENSELUG00000013674	PRDM12	100	65.957	Esox_lucius
ENSAPOG00000018234	-	100	66.667	ENSELUG00000009905	prdm12b	100	66.400	Esox_lucius
ENSAPOG00000018234	-	93	66.860	ENSFCAG00000043086	PRDM12	99	64.011	Felis_catus
ENSAPOG00000018234	-	100	68.493	ENSFALG00000001445	PRDM12	89	68.493	Ficedula_albicollis
ENSAPOG00000018234	-	100	65.500	ENSFHEG00000007746	-	100	65.250	Fundulus_heteroclitus
ENSAPOG00000018234	-	100	65.079	ENSFHEG00000003944	prdm12b	100	66.138	Fundulus_heteroclitus
ENSAPOG00000018234	-	100	64.829	ENSGMOG00000011797	prdm12b	99	66.213	Gadus_morhua
ENSAPOG00000018234	-	100	68.493	ENSGALG00000003895	PRDM12	99	68.493	Gallus_gallus
ENSAPOG00000018234	-	100	65.354	ENSGAFG00000010827	prdm12b	99	65.354	Gambusia_affinis
ENSAPOG00000018234	-	100	66.400	ENSGACG00000016713	prdm12b	99	66.400	Gasterosteus_aculeatus
ENSAPOG00000018234	-	100	67.120	ENSGAGG00000014083	PRDM12	99	66.757	Gopherus_agassizii
ENSAPOG00000018234	-	93	66.279	ENSGGOG00000010568	PRDM12	99	63.462	Gorilla_gorilla
ENSAPOG00000018234	-	100	68.085	ENSHBUG00000022878	prdm12b	100	68.085	Haplochromis_burtoni
ENSAPOG00000018234	-	100	69.424	ENSHBUG00000022537	-	93	69.424	Haplochromis_burtoni
ENSAPOG00000018234	-	93	65.988	ENSHGLG00000013939	PRDM12	99	61.741	Heterocephalus_glaber_female
ENSAPOG00000018234	-	92	68.129	ENSHCOG00000003663	prdm12b	100	62.755	Hippocampus_comes
ENSAPOG00000018234	-	100	66.307	ENSHCOG00000021167	-	100	65.768	Hippocampus_comes
ENSAPOG00000018234	-	100	64.305	ENSIPUG00000019544	PRDM12	100	64.305	Ictalurus_punctatus
ENSAPOG00000018234	-	100	68.351	ENSIPUG00000017053	prdm12b	100	68.617	Ictalurus_punctatus
ENSAPOG00000018234	-	97	65.922	ENSSTOG00000005986	PRDM12	92	65.546	Ictidomys_tridecemlineatus
ENSAPOG00000018234	-	93	66.570	ENSJJAG00000005424	Prdm12	98	68.000	Jaculus_jaculus
ENSAPOG00000018234	-	94	71.182	ENSKMAG00000021205	-	94	71.264	Kryptolebias_marmoratus
ENSAPOG00000018234	-	100	61.881	ENSKMAG00000016921	prdm12b	100	61.881	Kryptolebias_marmoratus
ENSAPOG00000018234	-	100	66.142	ENSLBEG00000017769	prdm12b	100	66.142	Labrus_bergylta
ENSAPOG00000018234	-	100	72.585	ENSLBEG00000007776	-	100	72.846	Labrus_bergylta
ENSAPOG00000018234	-	100	66.757	ENSLACG00000017560	PRDM12	99	66.757	Latimeria_chalumnae
ENSAPOG00000018234	-	100	68.158	ENSLOCG00000005429	prdm12b	100	69.211	Lepisosteus_oculatus
ENSAPOG00000018234	-	93	65.330	ENSLAFG00000006979	PRDM12	97	64.228	Loxodonta_africana
ENSAPOG00000018234	-	93	66.570	ENSMFAG00000040322	PRDM12	99	61.942	Macaca_fascicularis
ENSAPOG00000018234	-	93	66.570	ENSMNEG00000037234	PRDM12	99	63.736	Macaca_nemestrina
ENSAPOG00000018234	-	100	66.418	ENSMAMG00000018988	-	100	66.667	Mastacembelus_armatus
ENSAPOG00000018234	-	100	68.267	ENSMAMG00000013212	prdm12b	100	68.267	Mastacembelus_armatus
ENSAPOG00000018234	-	100	69.077	ENSMZEG00005000415	PRDM12	100	69.077	Maylandia_zebra
ENSAPOG00000018234	-	98	67.967	ENSMGAG00000005438	PRDM12	98	68.023	Meleagris_gallopavo
ENSAPOG00000018234	-	100	62.797	ENSMAUG00000013040	Prdm12	99	62.797	Mesocricetus_auratus
ENSAPOG00000018234	-	96	65.722	ENSMICG00000015480	PRDM12	99	63.032	Microcebus_murinus
ENSAPOG00000018234	-	99	65.193	ENSMOCG00000021026	Prdm12	92	65.722	Microtus_ochrogaster
ENSAPOG00000018234	-	100	66.667	ENSMODG00000012108	PRDM12	99	66.033	Monodelphis_domestica
ENSAPOG00000018234	-	85	63.208	ENSMALG00000021901	prdm12b	96	63.208	Monopterus_albus
ENSAPOG00000018234	-	93	66.860	MGP_CAROLIEiJ_G0023414	Prdm12	99	63.061	Mus_caroli
ENSAPOG00000018234	-	93	66.860	ENSMUSG00000079466	Prdm12	99	63.061	Mus_musculus
ENSAPOG00000018234	-	93	66.860	MGP_PahariEiJ_G0024871	Prdm12	99	63.061	Mus_pahari
ENSAPOG00000018234	-	93	66.860	MGP_SPRETEiJ_G0024331	Prdm12	99	63.061	Mus_spretus
ENSAPOG00000018234	-	92	67.160	ENSNGAG00000018480	Prdm12	98	65.607	Nannospalax_galili
ENSAPOG00000018234	-	100	66.935	ENSNBRG00000024312	-	100	67.473	Neolamprologus_brichardi
ENSAPOG00000018234	-	100	67.989	ENSNBRG00000006727	prdm12b	100	67.989	Neolamprologus_brichardi
ENSAPOG00000018234	-	82	82.114	ENSMEUG00000003828	PRDM12	65	98.824	Notamacropus_eugenii
ENSAPOG00000018234	-	93	66.279	ENSOPRG00000008680	PRDM12	98	67.692	Ochotona_princeps
ENSAPOG00000018234	-	100	64.286	ENSODEG00000016282	PRDM12	65	64.286	Octodon_degus
ENSAPOG00000018234	-	58	75.138	ENSOANG00000001043	PRDM12	76	73.889	Ornithorhynchus_anatinus
ENSAPOG00000018234	-	85	66.026	ENSOCUG00000008241	PRDM12	96	66.890	Oryctolagus_cuniculus
ENSAPOG00000018234	-	100	71.538	ENSORLG00000017558	-	100	71.538	Oryzias_latipes
ENSAPOG00000018234	-	100	66.931	ENSORLG00000007114	prdm12b	99	66.931	Oryzias_latipes
ENSAPOG00000018234	-	100	66.842	ENSORLG00020019565	prdm12b	99	66.842	Oryzias_latipes_hni
ENSAPOG00000018234	-	100	71.611	ENSORLG00020013167	-	100	71.611	Oryzias_latipes_hni
ENSAPOG00000018234	-	100	71.538	ENSORLG00015003435	-	100	71.538	Oryzias_latipes_hsok
ENSAPOG00000018234	-	100	66.667	ENSORLG00015007621	prdm12b	99	66.931	Oryzias_latipes_hsok
ENSAPOG00000018234	-	100	75.538	ENSOMEG00000007762	-	100	75.538	Oryzias_melastigma
ENSAPOG00000018234	-	100	66.492	ENSOMEG00000004134	prdm12b	99	65.707	Oryzias_melastigma
ENSAPOG00000018234	-	93	66.860	ENSOGAG00000007557	PRDM12	97	68.308	Otolemur_garnettii
ENSAPOG00000018234	-	79	62.791	ENSPPAG00000031506	-	99	61.564	Pan_paniscus
ENSAPOG00000018234	-	100	60.000	ENSPPRG00000023024	PRDM12	92	59.726	Panthera_pardus
ENSAPOG00000018234	-	93	66.570	ENSPTRG00000043324	-	99	63.736	Pan_troglodytes
ENSAPOG00000018234	-	93	66.570	ENSPTRG00000021475	PRDM12	99	63.736	Pan_troglodytes
ENSAPOG00000018234	-	93	66.570	ENSPANG00000025967	PRDM12	99	63.736	Papio_anubis
ENSAPOG00000018234	-	100	70.933	ENSPKIG00000007228	prdm12b	100	70.667	Paramormyrops_kingsleyae
ENSAPOG00000018234	-	96	64.672	ENSPKIG00000004305	PRDM12	94	67.988	Paramormyrops_kingsleyae
ENSAPOG00000018234	-	100	67.391	ENSPSIG00000006739	PRDM12	99	67.030	Pelodiscus_sinensis
ENSAPOG00000018234	-	100	65.517	ENSPMGG00000008867	prdm12b	99	66.048	Periophthalmus_magnuspinnatus
ENSAPOG00000018234	-	100	65.491	ENSPMGG00000002356	-	100	65.239	Periophthalmus_magnuspinnatus
ENSAPOG00000018234	-	95	66.286	ENSPEMG00000009969	Prdm12	92	66.000	Peromyscus_maniculatus_bairdii
ENSAPOG00000018234	-	100	66.938	ENSPCIG00000024119	PRDM12	99	66.938	Phascolarctos_cinereus
ENSAPOG00000018234	-	100	66.756	ENSPFOG00000019841	prdm12b	100	66.756	Poecilia_formosa
ENSAPOG00000018234	-	100	64.583	ENSPLAG00000016626	prdm12b	99	64.583	Poecilia_latipinna
ENSAPOG00000018234	-	94	65.840	ENSPMEG00000016698	prdm12b	97	65.840	Poecilia_mexicana
ENSAPOG00000018234	-	100	64.416	ENSPREG00000015073	prdm12b	99	65.195	Poecilia_reticulata
ENSAPOG00000018234	-	98	66.120	ENSPREG00000003211	-	97	66.120	Poecilia_reticulata
ENSAPOG00000018234	-	96	65.156	ENSPPYG00000019694	PRDM12	99	64.689	Pongo_abelii
ENSAPOG00000018234	-	93	66.860	ENSPCOG00000022255	PRDM12	99	62.895	Propithecus_coquereli
ENSAPOG00000018234	-	93	66.860	ENSPVAG00000001511	PRDM12	99	64.011	Pteropus_vampyrus
ENSAPOG00000018234	-	100	68.170	ENSPNYG00000009607	prdm12b	100	68.170	Pundamilia_nyererei
ENSAPOG00000018234	-	100	69.077	ENSPNYG00000013589	-	100	69.077	Pundamilia_nyererei
ENSAPOG00000018234	-	100	60.417	ENSPNAG00000013396	PRDM12	99	62.602	Pygocentrus_nattereri
ENSAPOG00000018234	-	100	66.755	ENSPNAG00000024532	prdm12b	100	67.021	Pygocentrus_nattereri
ENSAPOG00000018234	-	93	66.860	ENSRNOG00000009218	Prdm12	99	63.061	Rattus_norvegicus
ENSAPOG00000018234	-	89	66.465	ENSRBIG00000042712	PRDM12	88	66.667	Rhinopithecus_bieti
ENSAPOG00000018234	-	91	66.866	ENSRROG00000043554	PRDM12	99	67.601	Rhinopithecus_roxellana
ENSAPOG00000018234	-	100	66.757	ENSSHAG00000015972	PRDM12	99	66.757	Sarcophilus_harrisii
ENSAPOG00000018234	-	100	65.553	ENSSMAG00000003754	prdm12b	100	66.067	Scophthalmus_maximus
ENSAPOG00000018234	-	100	67.188	ENSSDUG00000023498	prdm12b	100	66.667	Seriola_dumerili
ENSAPOG00000018234	-	100	76.800	ENSSDUG00000019071	-	100	76.800	Seriola_dumerili
ENSAPOG00000018234	-	100	67.454	ENSSLDG00000009557	prdm12b	100	66.929	Seriola_lalandi_dorsalis
ENSAPOG00000018234	-	100	72.727	ENSSLDG00000013562	-	100	73.003	Seriola_lalandi_dorsalis
ENSAPOG00000018234	-	100	67.575	ENSSPUG00000013424	PRDM12	99	67.575	Sphenodon_punctatus
ENSAPOG00000018234	-	100	67.192	ENSSPAG00000018824	prdm12b	100	66.929	Stegastes_partitus
ENSAPOG00000018234	-	100	74.576	ENSSPAG00000022420	-	100	74.576	Stegastes_partitus
ENSAPOG00000018234	-	93	66.860	ENSSSCG00000005703	PRDM12	99	62.963	Sus_scrofa
ENSAPOG00000018234	-	100	66.402	ENSTRUG00000018659	prdm12b	100	66.402	Takifugu_rubripes
ENSAPOG00000018234	-	100	73.224	ENSTRUG00000013239	-	100	73.224	Takifugu_rubripes
ENSAPOG00000018234	-	100	68.579	ENSTNIG00000005859	-	99	68.306	Tetraodon_nigroviridis
ENSAPOG00000018234	-	100	65.344	ENSTNIG00000009020	prdm12b	99	65.344	Tetraodon_nigroviridis
ENSAPOG00000018234	-	93	66.860	ENSUAMG00000009653	PRDM12	96	65.352	Ursus_americanus
ENSAPOG00000018234	-	93	66.860	ENSVVUG00000027662	PRDM12	77	68.308	Vulpes_vulpes
ENSAPOG00000018234	-	100	65.435	ENSXCOG00000002836	prdm12b	99	65.435	Xiphophorus_couchianus
ENSAPOG00000018234	-	100	71.285	ENSXMAG00000028012	-	100	71.537	Xiphophorus_maculatus
ENSAPOG00000018234	-	100	65.699	ENSXMAG00000005537	prdm12b	100	65.699	Xiphophorus_maculatus