EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000019147 (Gene tree)
Gene ID: -
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: ras-related protein Rab-34-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 8131 bases
Position: chrMVNR01000829.1:166482-174612
Accession: 110960775
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000016015	MMR_HSR1	PF01926.23	7.6e-06	1	1
ENSAPOP00000016043	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000024883	-	624	-	ENSAPOP00000016015	207 (aa)	-	-
ENSAPOT00000033480	-	822	XM_022208144	ENSAPOP00000016043	273 (aa)	XP_022063836	-

Gene Model

Click here to download ENSAPOG00000019147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000019147's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000019147	rab34b	65	40.441	ENSAPOG00000019100	rab6ba	83	36.932
ENSAPOG00000019147	rab34b	57	30.769	ENSAPOG00000004311	-	63	30.769
ENSAPOG00000019147	rab34b	66	44.203	ENSAPOG00000007503	zgc:101559	60	43.262
ENSAPOG00000019147	rab34b	57	44.538	ENSAPOG00000007746	rab1ab	78	37.267
ENSAPOG00000019147	rab34b	67	35.461	ENSAPOG00000007269	rab9b	70	34.568
ENSAPOG00000019147	rab34b	60	43.200	ENSAPOG00000001040	-	79	40.260
ENSAPOG00000019147	rab34b	65	38.060	ENSAPOG00000008892	rab23	69	39.286
ENSAPOG00000019147	rab34b	72	36.667	ENSAPOG00000005731	rab6a	75	39.130
ENSAPOG00000019147	rab34b	72	36.667	ENSAPOG00000008754	rab15	77	37.126
ENSAPOG00000019147	rab34b	61	31.783	ENSAPOG00000021928	rab9a	63	31.783
ENSAPOG00000019147	rab34b	57	36.066	ENSAPOG00000005603	RAB9A	73	32.919
ENSAPOG00000019147	rab34b	65	40.000	ENSAPOG00000014397	rab6bb	76	38.509
ENSAPOG00000019147	rab34b	60	40.000	ENSAPOG00000008251	rab11al	58	40.000
ENSAPOG00000019147	rab34b	72	40.000	ENSAPOG00000005301	RAB39B	77	38.554
ENSAPOG00000019147	rab34b	72	39.333	ENSAPOG00000014970	-	73	38.854
ENSAPOG00000019147	rab34b	70	40.000	ENSAPOG00000006211	RAB15	77	38.922
ENSAPOG00000019147	rab34b	57	42.373	ENSAPOG00000022625	rab30	77	37.500
ENSAPOG00000019147	rab34b	58	35.484	ENSAPOG00000016091	-	79	32.121
ENSAPOG00000019147	rab34b	73	36.601	ENSAPOG00000019727	rab33ba	58	36.601
ENSAPOG00000019147	rab34b	99	45.909	ENSAPOG00000022911	rab36	82	52.511
ENSAPOG00000019147	rab34b	56	38.793	ENSAPOG00000010760	rab18a	74	33.987
ENSAPOG00000019147	rab34b	96	68.000	ENSAPOG00000003165	rab34a	80	73.832
ENSAPOG00000019147	rab34b	63	37.405	ENSAPOG00000021391	rab5aa	73	35.000
ENSAPOG00000019147	rab34b	63	32.824	ENSAPOG00000011363	-	69	33.125
ENSAPOG00000019147	rab34b	58	30.818	ENSAPOG00000003215	-	85	30.818
ENSAPOG00000019147	rab34b	57	41.026	ENSAPOG00000018256	rab11a	54	41.026
ENSAPOG00000019147	rab34b	70	35.616	ENSAPOG00000009188	rab42a	78	33.526
ENSAPOG00000019147	rab34b	64	33.908	ENSAPOG00000023455	rab11bb	74	33.908
ENSAPOG00000019147	rab34b	70	37.931	ENSAPOG00000008263	si:dkey-16l2.16	91	34.536
ENSAPOG00000019147	rab34b	63	39.231	ENSAPOG00000009138	rab2a	76	36.364
ENSAPOG00000019147	rab34b	57	44.538	ENSAPOG00000004980	-	74	40.741
ENSAPOG00000019147	rab34b	72	32.000	ENSAPOG00000011559	rab22a	81	31.875
ENSAPOG00000019147	rab34b	61	35.714	ENSAPOG00000016864	rab5c	71	33.750
ENSAPOG00000019147	rab34b	57	44.538	ENSAPOG00000008143	-	78	37.888
ENSAPOG00000019147	rab34b	58	35.484	ENSAPOG00000002585	RAB7A	59	36.066
ENSAPOG00000019147	rab34b	57	37.815	ENSAPOG00000008216	rab25b	57	37.815
ENSAPOG00000019147	rab34b	57	30.769	ENSAPOG00000015316	rhebl1	63	30.769
ENSAPOG00000019147	rab34b	62	43.511	ENSAPOG00000005341	-	62	40.667
ENSAPOG00000019147	rab34b	60	39.200	ENSAPOG00000021268	rab25a	59	39.200
ENSAPOG00000019147	rab34b	65	41.135	ENSAPOG00000007363	rab35b	94	35.233
ENSAPOG00000019147	rab34b	72	37.333	ENSAPOG00000016512	-	76	39.752
ENSAPOG00000019147	rab34b	76	34.545	ENSAPOG00000008641	rab14	99	34.545
ENSAPOG00000019147	rab34b	67	32.240	ENSAPOG00000019881	rab18b	88	32.240
ENSAPOG00000019147	rab34b	57	44.538	ENSAPOG00000012767	rab1ba	79	37.267
ENSAPOG00000019147	rab34b	66	40.580	ENSAPOG00000000952	rab33a	71	38.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000019147	rab34b	95	72.589	ENSACIG00000004859	rab34b	87	77.928	Amphilophus_citrinellus
ENSAPOG00000019147	rab34b	96	83.168	ENSAOCG00000007106	rab34b	81	96.861	Amphiprion_ocellaris
ENSAPOG00000019147	rab34b	82	96.861	ENSAPEG00000018607	rab34b	80	96.861	Amphiprion_percula
ENSAPOG00000019147	rab34b	81	86.547	ENSATEG00000006851	rab34b	90	86.547	Anabas_testudineus
ENSAPOG00000019147	rab34b	95	82.500	ENSACLG00000005733	rab34b	81	93.488	Astatotilapia_calliptera
ENSAPOG00000019147	rab34b	96	68.627	ENSAMXG00000006018	rab34b	84	75.349	Astyanax_mexicanus
ENSAPOG00000019147	rab34b	95	76.382	ENSCSEG00000018133	rab34b	91	80.435	Cynoglossus_semilaevis
ENSAPOG00000019147	rab34b	96	70.352	ENSDARG00000010977	rab34b	83	77.209	Danio_rerio
ENSAPOG00000019147	rab34b	96	75.124	ENSELUG00000005597	rab34b	86	82.063	Esox_lucius
ENSAPOG00000019147	rab34b	95	77.500	ENSFHEG00000004532	rab34b	85	88.372	Fundulus_heteroclitus
ENSAPOG00000019147	rab34b	72	87.333	ENSGMOG00000007140	rab34b	95	83.673	Gadus_morhua
ENSAPOG00000019147	rab34b	96	80.100	ENSGACG00000020514	rab34b	88	85.776	Gasterosteus_aculeatus
ENSAPOG00000019147	rab34b	95	70.202	ENSIPUG00000024531	rab34	88	71.681	Ictalurus_punctatus
ENSAPOG00000019147	rab34b	95	77.778	ENSKMAG00000019341	rab34b	85	88.372	Kryptolebias_marmoratus
ENSAPOG00000019147	rab34b	99	77.619	ENSLBEG00000027819	rab34b	88	93.220	Labrus_bergylta
ENSAPOG00000019147	rab34b	95	78.894	ENSMAMG00000020214	rab34b	84	91.943	Mastacembelus_armatus
ENSAPOG00000019147	rab34b	96	80.597	ENSMMOG00000010936	rab34b	77	88.128	Mola_mola
ENSAPOG00000019147	rab34b	96	77.114	ENSMALG00000018499	rab34b	83	84.685	Monopterus_albus
ENSAPOG00000019147	rab34b	96	81.592	ENSONIG00000005519	rab34b	85	92.558	Oreochromis_niloticus
ENSAPOG00000019147	rab34b	95	81.000	ENSORLG00000003119	rab34b	81	85.714	Oryzias_latipes
ENSAPOG00000019147	rab34b	95	81.500	ENSORLG00020016139	rab34b	79	87.907	Oryzias_latipes_hni
ENSAPOG00000019147	rab34b	95	81.500	ENSORLG00015000584	rab34b	81	86.161	Oryzias_latipes_hsok
ENSAPOG00000019147	rab34b	96	80.693	ENSOMEG00000010334	rab34b	88	88.372	Oryzias_melastigma
ENSAPOG00000019147	rab34b	96	70.000	ENSPKIG00000013326	rab34b	83	74.766	Paramormyrops_kingsleyae
ENSAPOG00000019147	rab34b	95	78.500	ENSPMGG00000021697	rab34b	84	87.442	Periophthalmus_magnuspinnatus
ENSAPOG00000019147	rab34b	95	80.000	ENSPFOG00000011444	rab34b	84	90.698	Poecilia_formosa
ENSAPOG00000019147	rab34b	95	79.899	ENSPLAG00000005074	rab34b	85	90.698	Poecilia_latipinna
ENSAPOG00000019147	rab34b	95	79.899	ENSPMEG00000013297	rab34b	85	90.698	Poecilia_mexicana
ENSAPOG00000019147	rab34b	95	79.000	ENSPREG00000009813	rab34b	85	90.233	Poecilia_reticulata
ENSAPOG00000019147	rab34b	96	80.808	ENSPNYG00000017153	rab34b	99	92.090	Pundamilia_nyererei
ENSAPOG00000019147	rab34b	73	82.895	ENSPNAG00000015040	rab34b	90	76.279	Pygocentrus_nattereri
ENSAPOG00000019147	rab34b	97	69.307	ENSSFOG00015005188	rab34	83	75.234	Scleropages_formosus
ENSAPOG00000019147	rab34b	96	77.723	ENSSMAG00000019926	rab34b	93	86.239	Scophthalmus_maximus
ENSAPOG00000019147	rab34b	95	82.500	ENSSDUG00000016760	rab34b	67	94.419	Seriola_dumerili
ENSAPOG00000019147	rab34b	82	86.628	ENSSLDG00000014812	rab34b	88	95.000	Seriola_lalandi_dorsalis
ENSAPOG00000019147	rab34b	95	80.905	ENSSPAG00000002801	rab34b	85	94.419	Stegastes_partitus
ENSAPOG00000019147	rab34b	96	74.146	ENSTRUG00000014481	rab34b	88	88.991	Takifugu_rubripes
ENSAPOG00000019147	rab34b	96	75.610	ENSTNIG00000016158	rab34b	86	85.202	Tetraodon_nigroviridis