EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000019615 (Gene tree)
Gene ID: 110947877
Gene Symbol: scaf4b
Alias: im:6900467|si:ch211-245g11.2
Full Name: splicing factor%2C arginine/serine-rich 15-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 28352 bases
Position: chrMVNR01000059.1:617095-645446
Accession: 110947877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000016489	RRM_1	PF00076.22	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000025482	-	3193	XM_022189192	ENSAPOP00000016489	755 (aa)	XP_022044884	UPI000B8FA3E5

Gene Model

Click here to download ENSAPOG00000019615's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000019615's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000019615	scaf4b	77	48.737	ENSAPOG00000002946	scaf4a	67	55.873

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000019615	scaf4b	100	94.312	ENSAOCG00000010433	scaf4b	100	93.783	Amphiprion_ocellaris
ENSAPOG00000019615	scaf4b	100	94.577	ENSAPEG00000010913	scaf4b	100	94.048	Amphiprion_percula
ENSAPOG00000019615	scaf4b	98	77.674	ENSATEG00000011758	scaf4b	100	76.604	Anabas_testudineus
ENSAPOG00000019615	scaf4b	100	79.288	ENSACLG00000024833	scaf4b	100	77.836	Astatotilapia_calliptera
ENSAPOG00000019615	scaf4b	59	67.526	ENSCJAG00000008993	SCAF4	73	58.305	Callithrix_jacchus
ENSAPOG00000019615	scaf4b	53	72.785	ENSCAFG00020026019	SCAF4	64	60.755	Canis_lupus_dingo
ENSAPOG00000019615	scaf4b	62	60.456	ENSTSYG00000011344	SCAF4	60	55.482	Carlito_syrichta
ENSAPOG00000019615	scaf4b	58	66.497	ENSCCAG00000033727	SCAF4	63	50.000	Cebus_capucinus
ENSAPOG00000019615	scaf4b	63	60.949	ENSCATG00000030379	SCAF4	51	60.949	Cercocebus_atys
ENSAPOG00000019615	scaf4b	53	73.585	ENSCLAG00000006298	SCAF4	50	60.232	Chinchilla_lanigera
ENSAPOG00000019615	scaf4b	63	61.314	ENSCSAG00000009438	SCAF4	51	61.314	Chlorocebus_sabaeus
ENSAPOG00000019615	scaf4b	53	41.228	ENSCING00000004224	-	78	42.017	Ciona_intestinalis
ENSAPOG00000019615	scaf4b	100	63.351	ENSCSEG00000012808	-	99	63.255	Cynoglossus_semilaevis
ENSAPOG00000019615	scaf4b	72	53.078	ENSCSEG00000019549	scaf4a	60	55.517	Cynoglossus_semilaevis
ENSAPOG00000019615	scaf4b	100	70.976	ENSCVAG00000009142	scaf4b	100	70.712	Cyprinodon_variegatus
ENSAPOG00000019615	scaf4b	99	46.136	ENSDARG00000077093	scaf4a	79	44.888	Danio_rerio
ENSAPOG00000019615	scaf4b	57	61.326	ENSDARG00000018854	scaf4b	62	61.170	Danio_rerio
ENSAPOG00000019615	scaf4b	61	53.901	ENSEBUG00000003891	SCAF8	53	53.307	Eptatretus_burgeri
ENSAPOG00000019615	scaf4b	60	67.005	ENSEASG00005007756	SCAF4	52	61.905	Equus_asinus_asinus
ENSAPOG00000019615	scaf4b	60	67.005	ENSECAG00000014248	SCAF4	52	61.905	Equus_caballus
ENSAPOG00000019615	scaf4b	100	73.553	ENSFHEG00000007634	scaf4b	100	71.711	Fundulus_heteroclitus
ENSAPOG00000019615	scaf4b	56	67.665	ENSGMOG00000015188	scaf4a	55	59.245	Gadus_morhua
ENSAPOG00000019615	scaf4b	52	72.143	ENSGACG00000020580	scaf4a	50	60.837	Gasterosteus_aculeatus
ENSAPOG00000019615	scaf4b	58	60.891	ENSHBUG00000007920	scaf4a	59	49.856	Haplochromis_burtoni
ENSAPOG00000019615	scaf4b	60	66.000	ENSHGLG00000010582	SCAF4	51	61.538	Heterocephalus_glaber_female
ENSAPOG00000019615	scaf4b	58	66.000	ENSHGLG00100009441	SCAF4	51	60.232	Heterocephalus_glaber_male
ENSAPOG00000019615	scaf4b	74	56.748	ENSIPUG00000011285	scaf4	67	65.385	Ictalurus_punctatus
ENSAPOG00000019615	scaf4b	53	74.051	ENSJJAG00000019447	Scaf4	61	57.312	Jaculus_jaculus
ENSAPOG00000019615	scaf4b	100	75.921	ENSKMAG00000005742	scaf4b	100	75.263	Kryptolebias_marmoratus
ENSAPOG00000019615	scaf4b	69	56.452	ENSLBEG00000014675	scaf4a	56	56.349	Labrus_bergylta
ENSAPOG00000019615	scaf4b	83	57.460	ENSLOCG00000009162	scaf4a	85	47.661	Lepisosteus_oculatus
ENSAPOG00000019615	scaf4b	60	60.714	ENSLAFG00000010710	SCAF4	51	64.455	Loxodonta_africana
ENSAPOG00000019615	scaf4b	63	60.949	ENSMFAG00000037668	SCAF4	51	60.949	Macaca_fascicularis
ENSAPOG00000019615	scaf4b	63	60.949	ENSMNEG00000032966	SCAF4	51	60.949	Macaca_nemestrina
ENSAPOG00000019615	scaf4b	62	59.848	ENSMLEG00000039674	SCAF4	51	59.848	Mandrillus_leucophaeus
ENSAPOG00000019615	scaf4b	61	59.031	ENSMZEG00005024349	scaf4a	61	50.072	Maylandia_zebra
ENSAPOG00000019615	scaf4b	61	65.581	ENSMGAG00000014515	SCAF4	67	59.470	Meleagris_gallopavo
ENSAPOG00000019615	scaf4b	63	61.905	ENSMICG00000005256	SCAF4	54	59.184	Microcebus_murinus
ENSAPOG00000019615	scaf4b	79	58.672	ENSMALG00000013825	scaf4a	61	59.410	Monopterus_albus
ENSAPOG00000019615	scaf4b	63	60.090	ENSMPUG00000001078	SCAF4	51	59.707	Mustela_putorius_furo
ENSAPOG00000019615	scaf4b	60	65.990	ENSODEG00000002718	SCAF4	50	60.076	Octodon_degus
ENSAPOG00000019615	scaf4b	58	60.591	ENSONIG00000004687	scaf4a	59	49.569	Oreochromis_niloticus
ENSAPOG00000019615	scaf4b	68	74.914	ENSONIG00000005610	scaf4b	87	74.914	Oreochromis_niloticus
ENSAPOG00000019615	scaf4b	100	68.296	ENSORLG00000003420	scaf4b	100	66.182	Oryzias_latipes
ENSAPOG00000019615	scaf4b	100	68.164	ENSORLG00020013853	scaf4b	100	66.050	Oryzias_latipes_hni
ENSAPOG00000019615	scaf4b	58	60.309	ENSORLG00015015779	SCAF8	50	52.768	Oryzias_latipes_hsok
ENSAPOG00000019615	scaf4b	59	59.641	ENSPPAG00000028535	SCAF4	52	52.203	Pan_paniscus
ENSAPOG00000019615	scaf4b	58	67.005	ENSPPRG00000000635	SCAF4	51	60.150	Panthera_pardus
ENSAPOG00000019615	scaf4b	58	67.005	ENSPTIG00000021578	SCAF4	53	60.150	Panthera_tigris_altaica
ENSAPOG00000019615	scaf4b	59	59.641	ENSPTRG00000013848	SCAF4	52	52.203	Pan_troglodytes
ENSAPOG00000019615	scaf4b	63	60.949	ENSPANG00000017332	SCAF4	51	60.949	Papio_anubis
ENSAPOG00000019615	scaf4b	58	65.641	ENSPKIG00000022408	scaf4a	73	60.684	Paramormyrops_kingsleyae
ENSAPOG00000019615	scaf4b	52	59.712	ENSPMAG00000006192	SCAF8	64	53.901	Petromyzon_marinus
ENSAPOG00000019615	scaf4b	62	61.735	ENSPCIG00000028183	SCAF4	60	64.929	Phascolarctos_cinereus
ENSAPOG00000019615	scaf4b	83	70.000	ENSPFOG00000003261	scaf4b	78	70.000	Poecilia_formosa
ENSAPOG00000019615	scaf4b	76	54.035	ENSPFOG00000017156	scaf4a	67	56.902	Poecilia_formosa
ENSAPOG00000019615	scaf4b	100	68.939	ENSPLAG00000004403	-	100	68.939	Poecilia_latipinna
ENSAPOG00000019615	scaf4b	100	68.939	ENSPMEG00000006666	-	100	68.939	Poecilia_mexicana
ENSAPOG00000019615	scaf4b	100	68.726	ENSPREG00000013510	scaf4b	100	68.726	Poecilia_reticulata
ENSAPOG00000019615	scaf4b	53	72.152	ENSPCOG00000018710	SCAF4	64	60.456	Propithecus_coquereli
ENSAPOG00000019615	scaf4b	100	79.156	ENSPNYG00000010526	scaf4b	100	77.704	Pundamilia_nyererei
ENSAPOG00000019615	scaf4b	98	75.887	ENSPNAG00000015199	-	56	75.887	Pygocentrus_nattereri
ENSAPOG00000019615	scaf4b	55	73.418	ENSRNOG00000002104	Scaf4	57	56.667	Rattus_norvegicus
ENSAPOG00000019615	scaf4b	61	42.921	ENSSFOG00015006338	scaf4a	59	46.292	Scleropages_formosus
ENSAPOG00000019615	scaf4b	100	77.647	ENSSMAG00000003738	scaf4b	100	77.326	Scophthalmus_maximus
ENSAPOG00000019615	scaf4b	79	56.569	ENSSMAG00000017901	scaf4a	55	58.608	Scophthalmus_maximus
ENSAPOG00000019615	scaf4b	100	83.071	ENSSDUG00000012380	scaf4b	100	81.234	Seriola_dumerili
ENSAPOG00000019615	scaf4b	100	82.808	ENSSLDG00000023152	-	100	80.971	Seriola_lalandi_dorsalis
ENSAPOG00000019615	scaf4b	100	62.087	ENSTRUG00000009536	-	100	61.559	Takifugu_rubripes
ENSAPOG00000019615	scaf4b	60	60.309	ENSTNIG00000016885	SCAF8	56	47.697	Tetraodon_nigroviridis
ENSAPOG00000019615	scaf4b	57	67.876	ENSUMAG00000016962	SCAF4	66	49.840	Ursus_maritimus