EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000019730 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 3869 bases
Position: chrMVNR01000895.1:8927-12795
Accession: 110961346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000032039	CAF1	PF04857.20	6.1e-33	1	1
ENSAPOP00000016562	CAF1	PF04857.20	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000025596	-	603	XM_022208930	ENSAPOP00000032039	200 (aa)	XP_022064622	-
ENSAPOT00000025581	-	207	-	ENSAPOP00000016562	68 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000019730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000019730's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000019730	-	100	75.000	ENSG00000140694	PARN	98	75.000	Homo_sapiens
ENSAPOG00000019730	-	100	78.636	ENSACIG00000000619	parn	81	86.154	Amphilophus_citrinellus
ENSAPOG00000019730	-	100	69.231	ENSANAG00000031516	PARN	92	80.000	Aotus_nancymaae
ENSAPOG00000019730	-	100	69.683	ENSCJAG00000015866	PARN	92	80.000	Callithrix_jacchus
ENSAPOG00000019730	-	100	69.683	ENSCCAG00000030367	PARN	92	80.000	Cebus_capucinus
ENSAPOG00000019730	-	100	70.588	ENSCANG00000023734	-	100	70.588	Colobus_angolensis_palliatus
ENSAPOG00000019730	-	100	86.700	ENSCSEG00000002064	parn	100	86.700	Cynoglossus_semilaevis
ENSAPOG00000019730	-	100	66.818	ENSDARG00000102634	parn	77	75.714	Danio_rerio
ENSAPOG00000019730	-	100	73.039	ENSDORG00000027812	-	100	73.039	Dipodomys_ordii
ENSAPOG00000019730	-	98	74.359	ENSFHEG00000013738	parn	92	88.136	Fundulus_heteroclitus
ENSAPOG00000019730	-	100	68.778	ENSGGOG00000025224	PARN	92	80.000	Gorilla_gorilla
ENSAPOG00000019730	-	99	63.134	ENSLACG00000004207	PARN	50	64.019	Latimeria_chalumnae
ENSAPOG00000019730	-	100	68.326	ENSMICG00000016053	PARN	92	78.333	Microcebus_murinus
ENSAPOG00000019730	-	100	64.706	ENSMUSG00000022685	Parn	100	76.829	Mus_musculus
ENSAPOG00000019730	-	100	73.399	ENSNGAG00000024082	-	100	73.399	Nannospalax_galili
ENSAPOG00000019730	-	100	69.231	ENSNLEG00000010241	PARN	92	80.000	Nomascus_leucogenys
ENSAPOG00000019730	-	71	64.375	ENSOANG00000029996	-	74	64.375	Ornithorhynchus_anatinus
ENSAPOG00000019730	-	100	86.700	ENSORLG00000024893	-	100	86.700	Oryzias_latipes
ENSAPOG00000019730	-	100	86.207	ENSOMEG00000019555	parn	97	86.207	Oryzias_melastigma
ENSAPOG00000019730	-	100	69.231	ENSPPAG00000031438	PARN	92	80.000	Pan_paniscus
ENSAPOG00000019730	-	100	68.778	ENSPTRG00000007792	PARN	92	80.000	Pan_troglodytes
ENSAPOG00000019730	-	99	65.297	ENSPCIG00000001259	PARN	92	78.333	Phascolarctos_cinereus
ENSAPOG00000019730	-	100	67.873	ENSPCOG00000019292	PARN	92	78.333	Propithecus_coquereli
ENSAPOG00000019730	-	100	64.706	ENSRNOG00000002912	Parn	96	66.327	Rattus_norvegicus
ENSAPOG00000019730	-	85	77.049	ENSRROG00000020116	-	86	78.689	Rhinopithecus_roxellana
ENSAPOG00000019730	-	100	86.207	ENSSLDG00000007603	-	100	86.207	Seriola_lalandi_dorsalis
ENSAPOG00000019730	-	84	83.607	ENSTRUG00000015208	-	87	83.607	Takifugu_rubripes