EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000019749 (Gene tree)
Gene ID: 110956030
Gene Symbol: tnrc6c1
Alias: fj17e06|si:dkey-54k13.1|unm_sa1472|wu:fj17e06
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 30601 bases
Position: chrMVNR01000441.1:398488-429088
Accession: 110956030
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000016520	Ago_hook	PF10427.9	8.2e-08	1	1
ENSAPOP00000016520	RRM_1	PF00076.22	0.0002	1	1
ENSAPOP00000016554	RRM_1	PF00076.22	0.0002	1	1
ENSAPOP00000016564	RRM_1	PF00076.22	0.00022	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000025579	-	5721	-	ENSAPOP00000016564	1841 (aa)	-	-
ENSAPOT00000025571	-	5180	XM_022201259	ENSAPOP00000016554	1699 (aa)	XP_022056951	UPI000B8FE30A
ENSAPOT00000033679	-	5070	-	ENSAPOP00000016520	1689 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000019749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000019749's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000019749	tnrc6c1	98	48.947	ENSG00000078687	TNRC6C	100	56.897	Homo_sapiens
ENSAPOG00000019749	tnrc6c1	98	48.576	ENSAMEG00000013756	TNRC6C	77	52.683	Ailuropoda_melanoleuca
ENSAPOG00000019749	tnrc6c1	99	80.431	ENSACIG00000008075	tnrc6c1	99	80.969	Amphilophus_citrinellus
ENSAPOG00000019749	tnrc6c1	100	98.176	ENSAOCG00000023968	tnrc6c1	100	98.176	Amphiprion_ocellaris
ENSAPOG00000019749	tnrc6c1	100	98.412	ENSAPEG00000009020	tnrc6c1	100	98.412	Amphiprion_percula
ENSAPOG00000019749	tnrc6c1	98	49.816	ENSAPLG00000005456	TNRC6C	73	53.430	Anas_platyrhynchos
ENSAPOG00000019749	tnrc6c1	98	50.502	ENSACAG00000016198	TNRC6C	71	54.298	Anolis_carolinensis
ENSAPOG00000019749	tnrc6c1	98	49.079	ENSANAG00000021554	TNRC6C	80	54.506	Aotus_nancymaae
ENSAPOG00000019749	tnrc6c1	99	77.559	ENSACLG00000000424	tnrc6c1	99	77.503	Astatotilapia_calliptera
ENSAPOG00000019749	tnrc6c1	98	48.281	ENSBTAG00000018658	TNRC6C	96	52.352	Bos_taurus
ENSAPOG00000019749	tnrc6c1	98	48.869	ENSCJAG00000019431	TNRC6C	80	54.390	Callithrix_jacchus
ENSAPOG00000019749	tnrc6c1	95	57.158	ENSCAFG00000005224	TNRC6C	78	51.225	Canis_familiaris
ENSAPOG00000019749	tnrc6c1	98	50.027	ENSCAFG00020006661	TNRC6C	80	54.670	Canis_lupus_dingo
ENSAPOG00000019749	tnrc6c1	98	49.568	ENSCHIG00000026004	TNRC6C	95	53.556	Capra_hircus
ENSAPOG00000019749	tnrc6c1	92	50.000	ENSTSYG00000005403	TNRC6C	80	53.431	Carlito_syrichta
ENSAPOG00000019749	tnrc6c1	98	46.989	ENSCAPG00000007307	TNRC6C	94	49.128	Cavia_aperea
ENSAPOG00000019749	tnrc6c1	98	50.054	ENSCPOG00000000467	TNRC6C	95	54.925	Cavia_porcellus
ENSAPOG00000019749	tnrc6c1	98	49.839	ENSCCAG00000030524	TNRC6C	80	54.292	Cebus_capucinus
ENSAPOG00000019749	tnrc6c1	98	49.157	ENSCATG00000033135	TNRC6C	80	54.617	Cercocebus_atys
ENSAPOG00000019749	tnrc6c1	98	50.972	ENSCLAG00000011139	TNRC6C	71	56.115	Chinchilla_lanigera
ENSAPOG00000019749	tnrc6c1	98	49.259	ENSCSAG00000005167	TNRC6C	72	53.110	Chlorocebus_sabaeus
ENSAPOG00000019749	tnrc6c1	64	63.833	ENSCHOG00000000088	TNRC6C	56	64.688	Choloepus_hoffmanni
ENSAPOG00000019749	tnrc6c1	100	50.078	ENSCPBG00000027960	TNRC6C	80	56.419	Chrysemys_picta_bellii
ENSAPOG00000019749	tnrc6c1	98	49.210	ENSCANG00000041771	TNRC6C	80	54.689	Colobus_angolensis_palliatus
ENSAPOG00000019749	tnrc6c1	98	49.786	ENSCGRG00001022686	Tnrc6c	80	53.742	Cricetulus_griseus_chok1gshd
ENSAPOG00000019749	tnrc6c1	98	50.108	ENSCGRG00000018041	Tnrc6c	80	53.742	Cricetulus_griseus_crigri
ENSAPOG00000019749	tnrc6c1	99	82.519	ENSCSEG00000012744	tnrc6c1	99	80.773	Cynoglossus_semilaevis
ENSAPOG00000019749	tnrc6c1	93	76.136	ENSDARG00000076847	tnrc6c1	97	76.082	Danio_rerio
ENSAPOG00000019749	tnrc6c1	99	48.456	ENSDNOG00000003247	TNRC6C	93	53.474	Dasypus_novemcinctus
ENSAPOG00000019749	tnrc6c1	98	46.828	ENSDORG00000004558	Tnrc6c	80	51.957	Dipodomys_ordii
ENSAPOG00000019749	tnrc6c1	87	56.754	ENSETEG00000005527	TNRC6C	86	55.976	Echinops_telfairi
ENSAPOG00000019749	tnrc6c1	92	50.544	ENSEASG00005004799	TNRC6C	80	55.508	Equus_asinus_asinus
ENSAPOG00000019749	tnrc6c1	98	49.892	ENSECAG00000012486	TNRC6C	71	55.508	Equus_caballus
ENSAPOG00000019749	tnrc6c1	92	57.876	ENSEEUG00000010008	TNRC6C	76	57.805	Erinaceus_europaeus
ENSAPOG00000019749	tnrc6c1	98	48.679	ENSFCAG00000028358	TNRC6C	80	54.760	Felis_catus
ENSAPOG00000019749	tnrc6c1	92	49.235	ENSFALG00000000848	TNRC6C	81	53.247	Ficedula_albicollis
ENSAPOG00000019749	tnrc6c1	96	50.963	ENSFDAG00000010368	TNRC6C	78	55.460	Fukomys_damarensis
ENSAPOG00000019749	tnrc6c1	99	86.085	ENSFHEG00000002936	tnrc6c1	100	83.832	Fundulus_heteroclitus
ENSAPOG00000019749	tnrc6c1	100	49.202	ENSGALG00000001725	TNRC6C	80	56.156	Gallus_gallus
ENSAPOG00000019749	tnrc6c1	100	86.033	ENSGAFG00000019019	tnrc6c1	100	85.411	Gambusia_affinis
ENSAPOG00000019749	tnrc6c1	99	78.380	ENSGACG00000012320	tnrc6c1	98	75.936	Gasterosteus_aculeatus
ENSAPOG00000019749	tnrc6c1	100	51.635	ENSGAGG00000022043	TNRC6C	76	56.460	Gopherus_agassizii
ENSAPOG00000019749	tnrc6c1	98	49.131	ENSGGOG00000011304	TNRC6C	80	54.799	Gorilla_gorilla
ENSAPOG00000019749	tnrc6c1	100	86.628	ENSHBUG00000010846	tnrc6c1	100	86.326	Haplochromis_burtoni
ENSAPOG00000019749	tnrc6c1	98	50.378	ENSHGLG00000004809	TNRC6C	71	54.989	Heterocephalus_glaber_female
ENSAPOG00000019749	tnrc6c1	98	50.189	ENSHGLG00100012597	TNRC6C	71	54.585	Heterocephalus_glaber_male
ENSAPOG00000019749	tnrc6c1	99	63.404	ENSIPUG00000000818	tnrc6c1	99	61.412	Ictalurus_punctatus
ENSAPOG00000019749	tnrc6c1	98	50.134	ENSSTOG00000009101	TNRC6C	77	55.140	Ictidomys_tridecemlineatus
ENSAPOG00000019749	tnrc6c1	98	49.492	ENSJJAG00000017055	Tnrc6c	71	54.694	Jaculus_jaculus
ENSAPOG00000019749	tnrc6c1	98	79.965	ENSKMAG00000021023	tnrc6c1	100	80.762	Kryptolebias_marmoratus
ENSAPOG00000019749	tnrc6c1	96	48.846	ENSLACG00000015283	TNRC6C	77	52.323	Latimeria_chalumnae
ENSAPOG00000019749	tnrc6c1	99	76.856	ENSLOCG00000013377	tnrc6c1	92	77.882	Lepisosteus_oculatus
ENSAPOG00000019749	tnrc6c1	98	49.919	ENSLAFG00000011122	TNRC6C	76	53.211	Loxodonta_africana
ENSAPOG00000019749	tnrc6c1	98	49.157	ENSMFAG00000043943	TNRC6C	80	54.617	Macaca_fascicularis
ENSAPOG00000019749	tnrc6c1	98	49.365	ENSMMUG00000011924	TNRC6C	80	54.617	Macaca_mulatta
ENSAPOG00000019749	tnrc6c1	98	49.104	ENSMNEG00000030405	TNRC6C	80	54.545	Macaca_nemestrina
ENSAPOG00000019749	tnrc6c1	98	49.157	ENSMLEG00000033436	TNRC6C	80	54.617	Mandrillus_leucophaeus
ENSAPOG00000019749	tnrc6c1	100	88.190	ENSMAMG00000023613	tnrc6c1	100	87.368	Mastacembelus_armatus
ENSAPOG00000019749	tnrc6c1	99	86.463	ENSMZEG00005010920	tnrc6c1	99	85.651	Maylandia_zebra
ENSAPOG00000019749	tnrc6c1	93	67.500	ENSMGAG00000003906	TNRC6C	64	66.071	Meleagris_gallopavo
ENSAPOG00000019749	tnrc6c1	92	50.057	ENSMAUG00000021618	Tnrc6c	80	54.229	Mesocricetus_auratus
ENSAPOG00000019749	tnrc6c1	98	49.181	ENSMICG00000003952	TNRC6C	80	55.229	Microcebus_murinus
ENSAPOG00000019749	tnrc6c1	98	49.333	ENSMOCG00000015879	Tnrc6c	77	55.103	Microtus_ochrogaster
ENSAPOG00000019749	tnrc6c1	94	86.006	ENSMMOG00000005203	tnrc6c1	100	84.830	Mola_mola
ENSAPOG00000019749	tnrc6c1	100	48.932	ENSMODG00000001785	TNRC6C	71	55.761	Monodelphis_domestica
ENSAPOG00000019749	tnrc6c1	98	49.490	MGP_CAROLIEiJ_G0017465	Tnrc6c	77	54.786	Mus_caroli
ENSAPOG00000019749	tnrc6c1	98	49.517	ENSMUSG00000025571	Tnrc6c	77	54.786	Mus_musculus
ENSAPOG00000019749	tnrc6c1	98	49.544	MGP_PahariEiJ_G0018593	Tnrc6c	77	55.000	Mus_pahari
ENSAPOG00000019749	tnrc6c1	98	49.356	MGP_SPRETEiJ_G0018309	Tnrc6c	77	54.571	Mus_spretus
ENSAPOG00000019749	tnrc6c1	98	48.863	ENSMPUG00000013348	TNRC6C	71	53.749	Mustela_putorius_furo
ENSAPOG00000019749	tnrc6c1	98	48.808	ENSMLUG00000014431	TNRC6C	71	53.138	Myotis_lucifugus
ENSAPOG00000019749	tnrc6c1	98	49.946	ENSNGAG00000012203	Tnrc6c	71	54.048	Nannospalax_galili
ENSAPOG00000019749	tnrc6c1	100	86.913	ENSNBRG00000005344	tnrc6c1	100	87.089	Neolamprologus_brichardi
ENSAPOG00000019749	tnrc6c1	98	47.831	ENSNLEG00000000047	TNRC6C	71	50.314	Nomascus_leucogenys
ENSAPOG00000019749	tnrc6c1	93	45.922	ENSMEUG00000005104	TNRC6C	71	67.161	Notamacropus_eugenii
ENSAPOG00000019749	tnrc6c1	93	51.130	ENSODEG00000012499	TNRC6C	89	55.190	Octodon_degus
ENSAPOG00000019749	tnrc6c1	94	87.274	ENSONIG00000002210	tnrc6c1	100	86.900	Oreochromis_niloticus
ENSAPOG00000019749	tnrc6c1	69	90.323	ENSOANG00000009758	-	67	54.961	Ornithorhynchus_anatinus
ENSAPOG00000019749	tnrc6c1	100	80.398	ENSORLG00000009837	tnrc6c1	100	85.455	Oryzias_latipes
ENSAPOG00000019749	tnrc6c1	100	78.522	ENSORLG00020016510	tnrc6c1	100	81.234	Oryzias_latipes_hni
ENSAPOG00000019749	tnrc6c1	80	77.476	ENSORLG00015000171	tnrc6c1	99	77.835	Oryzias_latipes_hsok
ENSAPOG00000019749	tnrc6c1	100	82.387	ENSOMEG00000000357	tnrc6c1	100	80.950	Oryzias_melastigma
ENSAPOG00000019749	tnrc6c1	92	48.571	ENSOGAG00000007197	TNRC6C	89	52.525	Otolemur_garnettii
ENSAPOG00000019749	tnrc6c1	95	46.285	ENSOARG00000006041	TNRC6C	93	51.553	Ovis_aries
ENSAPOG00000019749	tnrc6c1	98	49.025	ENSPPAG00000027160	TNRC6C	80	54.310	Pan_paniscus
ENSAPOG00000019749	tnrc6c1	98	48.732	ENSPPRG00000018881	TNRC6C	80	54.779	Panthera_pardus
ENSAPOG00000019749	tnrc6c1	86	56.553	ENSPTIG00000008791	TNRC6C	68	53.129	Panthera_tigris_altaica
ENSAPOG00000019749	tnrc6c1	98	49.077	ENSPTRG00000009699	TNRC6C	80	54.382	Pan_troglodytes
ENSAPOG00000019749	tnrc6c1	98	49.157	ENSPANG00000019994	TNRC6C	80	54.735	Papio_anubis
ENSAPOG00000019749	tnrc6c1	94	57.159	ENSPKIG00000005428	tnrc6c1	100	58.588	Paramormyrops_kingsleyae
ENSAPOG00000019749	tnrc6c1	97	50.269	ENSPSIG00000018069	TNRC6C	77	55.163	Pelodiscus_sinensis
ENSAPOG00000019749	tnrc6c1	92	74.388	ENSPMGG00000022911	tnrc6c1	98	78.138	Periophthalmus_magnuspinnatus
ENSAPOG00000019749	tnrc6c1	98	50.107	ENSPEMG00000009785	Tnrc6c	80	51.386	Peromyscus_maniculatus_bairdii
ENSAPOG00000019749	tnrc6c1	51	39.623	ENSPCIG00000017421	-	65	43.921	Phascolarctos_cinereus
ENSAPOG00000019749	tnrc6c1	99	85.832	ENSPFOG00000012560	tnrc6c1	99	84.098	Poecilia_formosa
ENSAPOG00000019749	tnrc6c1	94	86.115	ENSPLAG00000021055	tnrc6c1	100	86.052	Poecilia_latipinna
ENSAPOG00000019749	tnrc6c1	98	49.285	ENSPPYG00000008679	TNRC6C	71	53.077	Pongo_abelii
ENSAPOG00000019749	tnrc6c1	87	67.040	ENSPCAG00000012510	TNRC6C	67	66.590	Procavia_capensis
ENSAPOG00000019749	tnrc6c1	93	51.299	ENSPCOG00000021451	TNRC6C	80	55.158	Propithecus_coquereli
ENSAPOG00000019749	tnrc6c1	68	65.289	ENSPVAG00000002008	TNRC6C	73	65.289	Pteropus_vampyrus
ENSAPOG00000019749	tnrc6c1	100	84.779	ENSPNYG00000014477	tnrc6c1	100	86.078	Pundamilia_nyererei
ENSAPOG00000019749	tnrc6c1	92	49.715	ENSRNOG00000022395	Tnrc6c	80	54.740	Rattus_norvegicus
ENSAPOG00000019749	tnrc6c1	98	49.262	ENSRBIG00000027777	TNRC6C	80	54.689	Rhinopithecus_bieti
ENSAPOG00000019749	tnrc6c1	98	49.262	ENSRROG00000042912	TNRC6C	80	54.689	Rhinopithecus_roxellana
ENSAPOG00000019749	tnrc6c1	98	49.262	ENSSBOG00000023981	TNRC6C	80	52.863	Saimiri_boliviensis_boliviensis
ENSAPOG00000019749	tnrc6c1	51	63.915	ENSSHAG00000018330	-	100	63.057	Sarcophilus_harrisii
ENSAPOG00000019749	tnrc6c1	99	61.620	ENSSFOG00015006475	tnrc6c1	99	59.884	Scleropages_formosus
ENSAPOG00000019749	tnrc6c1	84	65.432	ENSSFOG00015004735	-	99	68.633	Scleropages_formosus
ENSAPOG00000019749	tnrc6c1	100	87.617	ENSSMAG00000012761	tnrc6c1	100	87.336	Scophthalmus_maximus
ENSAPOG00000019749	tnrc6c1	99	91.672	ENSSDUG00000002366	tnrc6c1	98	90.845	Seriola_dumerili
ENSAPOG00000019749	tnrc6c1	94	91.755	ENSSLDG00000025613	tnrc6c1	100	91.068	Seriola_lalandi_dorsalis
ENSAPOG00000019749	tnrc6c1	64	66.667	ENSSARG00000006816	TNRC6C	68	66.667	Sorex_araneus
ENSAPOG00000019749	tnrc6c1	84	58.571	ENSSPUG00000007341	TNRC6C	93	52.632	Sphenodon_punctatus
ENSAPOG00000019749	tnrc6c1	98	94.762	ENSSPAG00000014977	tnrc6c1	98	94.303	Stegastes_partitus
ENSAPOG00000019749	tnrc6c1	90	63.766	ENSSSCG00000034373	TNRC6C	79	68.102	Sus_scrofa
ENSAPOG00000019749	tnrc6c1	96	51.396	ENSTGUG00000007733	TNRC6C	78	55.261	Taeniopygia_guttata
ENSAPOG00000019749	tnrc6c1	99	81.305	ENSTRUG00000011685	tnrc6c1	99	79.541	Takifugu_rubripes
ENSAPOG00000019749	tnrc6c1	98	77.732	ENSTNIG00000005273	tnrc6c1	100	79.615	Tetraodon_nigroviridis
ENSAPOG00000019749	tnrc6c1	64	52.554	ENSTBEG00000005046	TNRC6C	100	50.761	Tupaia_belangeri
ENSAPOG00000019749	tnrc6c1	97	50.134	ENSTTRG00000010828	TNRC6C	77	54.943	Tursiops_truncatus
ENSAPOG00000019749	tnrc6c1	99	47.748	ENSUMAG00000013614	TNRC6C	72	52.311	Ursus_maritimus
ENSAPOG00000019749	tnrc6c1	50	52.308	ENSVPAG00000006765	-	80	64.109	Vicugna_pacos
ENSAPOG00000019749	tnrc6c1	92	51.117	ENSVVUG00000015268	TNRC6C	80	55.388	Vulpes_vulpes
ENSAPOG00000019749	tnrc6c1	92	49.857	ENSXETG00000019470	tnrc6c	89	54.122	Xenopus_tropicalis
ENSAPOG00000019749	tnrc6c1	100	85.857	ENSXMAG00000025971	tnrc6c1	100	85.723	Xiphophorus_maculatus