EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000019754 (Gene tree)
Gene ID: 110949063
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 5799 bases
Position: chrMVNR01000094.1:120402-126200
Accession: 110949063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000016648	Gar1	PF04410.14	2.3e-39	1	1
ENSAPOP00000016631	Gar1	PF04410.14	2.3e-39	1	1
ENSAPOP00000016637	Gar1	PF04410.14	2.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000033725	-	1009	-	ENSAPOP00000016637	214 (aa)	-	UPI000B907864
ENSAPOT00000033722	-	723	XM_022190902	ENSAPOP00000016631	214 (aa)	XP_022046594	UPI000B907864
ENSAPOT00000025704	-	3450	-	ENSAPOP00000016648	212 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000019754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000019754's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000019754	gar1	50	93.458	ENSAMEG00000004605	GAR1	52	93.458	Ailuropoda_melanoleuca
ENSAPOG00000019754	gar1	51	100.000	ENSAOCG00000020947	gar1	50	100.000	Amphiprion_ocellaris
ENSAPOG00000019754	gar1	51	100.000	ENSAPEG00000001676	gar1	50	100.000	Amphiprion_percula
ENSAPOG00000019754	gar1	51	99.074	ENSATEG00000003733	gar1	50	99.074	Anabas_testudineus
ENSAPOG00000019754	gar1	50	89.623	ENSAPLG00000010926	GAR1	59	89.623	Anas_platyrhynchos
ENSAPOG00000019754	gar1	50	92.453	ENSACAG00000010031	GAR1	50	92.453	Anolis_carolinensis
ENSAPOG00000019754	gar1	50	94.393	ENSANAG00000021608	GAR1	67	86.897	Aotus_nancymaae
ENSAPOG00000019754	gar1	50	94.393	ENSBTAG00000000748	GAR1	68	90.141	Bos_taurus
ENSAPOG00000019754	gar1	53	57.143	WBGene00022046	Y66H1A.4	54	52.632	Caenorhabditis_elegans
ENSAPOG00000019754	gar1	50	94.393	ENSCJAG00000004041	GAR1	67	86.897	Callithrix_jacchus
ENSAPOG00000019754	gar1	52	92.727	ENSCHIG00000016026	-	51	94.393	Capra_hircus
ENSAPOG00000019754	gar1	50	94.393	ENSTSYG00000013668	-	50	94.393	Carlito_syrichta
ENSAPOG00000019754	gar1	50	85.981	ENSTSYG00000026632	-	68	79.104	Carlito_syrichta
ENSAPOG00000019754	gar1	50	94.393	ENSCCAG00000029372	GAR1	67	86.897	Cebus_capucinus
ENSAPOG00000019754	gar1	52	92.727	ENSCATG00000021854	GAR1	54	94.393	Cercocebus_atys
ENSAPOG00000019754	gar1	52	91.818	ENSCLAG00000005335	GAR1	69	96.364	Chinchilla_lanigera
ENSAPOG00000019754	gar1	50	92.523	ENSCSAG00000003922	GAR1	54	94.393	Chlorocebus_sabaeus
ENSAPOG00000019754	gar1	50	93.396	ENSCPBG00000004310	GAR1	54	93.396	Chrysemys_picta_bellii
ENSAPOG00000019754	gar1	62	87.023	ENSCGRG00000010165	-	92	87.023	Cricetulus_griseus_crigri
ENSAPOG00000019754	gar1	51	98.148	ENSCVAG00000002103	gar1	52	98.148	Cyprinodon_variegatus
ENSAPOG00000019754	gar1	58	90.984	ENSDNOG00000037632	GAR1	54	93.458	Dasypus_novemcinctus
ENSAPOG00000019754	gar1	52	91.892	ENSDORG00000000482	Gar1	90	86.014	Dipodomys_ordii
ENSAPOG00000019754	gar1	52	93.636	ENSEASG00005004658	GAR1	50	95.327	Equus_asinus_asinus
ENSAPOG00000019754	gar1	52	92.727	ENSECAG00000013624	GAR1	54	94.393	Equus_caballus
ENSAPOG00000019754	gar1	50	57.009	ENSFCAG00000025841	-	50	59.813	Felis_catus
ENSAPOG00000019754	gar1	50	94.393	ENSFCAG00000040791	-	68	91.549	Felis_catus
ENSAPOG00000019754	gar1	52	97.297	ENSFHEG00000008068	gar1	50	97.222	Fundulus_heteroclitus
ENSAPOG00000019754	gar1	50	95.327	ENSHGLG00000000493	GAR1	72	98.182	Heterocephalus_glaber_female
ENSAPOG00000019754	gar1	52	96.364	ENSIPUG00000003194	gar1	51	96.296	Ictalurus_punctatus
ENSAPOG00000019754	gar1	51	91.743	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSAPOG00000019754	gar1	52	95.495	ENSKMAG00000010402	gar1	51	96.296	Kryptolebias_marmoratus
ENSAPOG00000019754	gar1	50	89.623	ENSLACG00000003306	GAR1	64	89.623	Latimeria_chalumnae
ENSAPOG00000019754	gar1	51	80.556	ENSMFAG00000003572	-	52	80.374	Macaca_fascicularis
ENSAPOG00000019754	gar1	67	86.620	ENSMAUG00000016788	Gar1	70	98.182	Mesocricetus_auratus
ENSAPOG00000019754	gar1	53	91.071	ENSMICG00000003326	GAR1	67	82.069	Microcebus_murinus
ENSAPOG00000019754	gar1	67	85.211	ENSMOCG00000001340	Gar1	70	98.182	Microtus_ochrogaster
ENSAPOG00000019754	gar1	50	97.196	ENSMMOG00000004156	gar1	53	96.296	Mola_mola
ENSAPOG00000019754	gar1	50	96.262	ENSMALG00000009672	gar1	50	95.370	Monopterus_albus
ENSAPOG00000019754	gar1	82	85.915	MGP_CAROLIEiJ_G0025627	Gar1	70	98.182	Mus_caroli
ENSAPOG00000019754	gar1	68	84.828	ENSMUSG00000028010	Gar1	70	98.182	Mus_musculus
ENSAPOG00000019754	gar1	68	84.828	MGP_PahariEiJ_G0027076	Gar1	70	98.182	Mus_pahari
ENSAPOG00000019754	gar1	68	84.828	MGP_SPRETEiJ_G0026580	Gar1	70	98.182	Mus_spretus
ENSAPOG00000019754	gar1	50	94.393	ENSMPUG00000008615	GAR1	68	91.549	Mustela_putorius_furo
ENSAPOG00000019754	gar1	52	92.727	ENSNGAG00000008268	Gar1	71	96.364	Nannospalax_galili
ENSAPOG00000019754	gar1	52	92.727	ENSNLEG00000016578	GAR1	50	94.393	Nomascus_leucogenys
ENSAPOG00000019754	gar1	68	76.923	ENSNLEG00000034282	-	54	78.505	Nomascus_leucogenys
ENSAPOG00000019754	gar1	65	84.672	ENSODEG00000011083	GAR1	59	92.035	Octodon_degus
ENSAPOG00000019754	gar1	50	93.396	ENSOANG00000003665	GAR1	74	73.171	Ornithorhynchus_anatinus
ENSAPOG00000019754	gar1	50	94.393	ENSOCUG00000003901	GAR1	67	86.207	Oryctolagus_cuniculus
ENSAPOG00000019754	gar1	51	98.148	ENSORLG00015017643	gar1	67	90.411	Oryzias_latipes_hsok
ENSAPOG00000019754	gar1	50	94.393	ENSOGAG00000004693	GAR1	67	86.014	Otolemur_garnettii
ENSAPOG00000019754	gar1	50	94.393	ENSOARG00000004910	GAR1	67	90.141	Ovis_aries
ENSAPOG00000019754	gar1	50	94.393	ENSPPAG00000014081	GAR1	54	94.393	Pan_paniscus
ENSAPOG00000019754	gar1	50	94.393	ENSPPRG00000023697	GAR1	68	91.549	Panthera_pardus
ENSAPOG00000019754	gar1	50	94.393	ENSPTIG00000021565	GAR1	68	91.549	Panthera_tigris_altaica
ENSAPOG00000019754	gar1	70	77.876	ENSPTRG00000049340	-	51	76.636	Pan_troglodytes
ENSAPOG00000019754	gar1	52	92.727	ENSPTRG00000016364	GAR1	54	94.393	Pan_troglodytes
ENSAPOG00000019754	gar1	67	86.620	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSAPOG00000019754	gar1	51	96.296	ENSPFOG00000024155	gar1	51	96.296	Poecilia_formosa
ENSAPOG00000019754	gar1	51	96.296	ENSPLAG00000015056	gar1	51	96.296	Poecilia_latipinna
ENSAPOG00000019754	gar1	51	97.222	ENSPMEG00000009320	gar1	52	97.222	Poecilia_mexicana
ENSAPOG00000019754	gar1	50	92.523	ENSPCOG00000027049	GAR1	55	94.393	Propithecus_coquereli
ENSAPOG00000019754	gar1	52	94.545	ENSPNAG00000019686	gar1	57	80.851	Pygocentrus_nattereri
ENSAPOG00000019754	gar1	51	96.296	ENSRNOG00000061146	Gar1	63	96.262	Rattus_norvegicus
ENSAPOG00000019754	gar1	53	76.786	ENSRBIG00000042411	-	52	77.570	Rhinopithecus_bieti
ENSAPOG00000019754	gar1	50	94.393	ENSRBIG00000019547	GAR1	54	94.393	Rhinopithecus_bieti
ENSAPOG00000019754	gar1	52	92.727	ENSRROG00000028454	GAR1	54	94.393	Rhinopithecus_roxellana
ENSAPOG00000019754	gar1	53	76.786	ENSRROG00000044348	-	51	77.570	Rhinopithecus_roxellana
ENSAPOG00000019754	gar1	50	94.393	ENSSBOG00000024785	GAR1	65	88.652	Saimiri_boliviensis_boliviensis
ENSAPOG00000019754	gar1	51	96.296	ENSSMAG00000009976	gar1	50	96.296	Scophthalmus_maximus
ENSAPOG00000019754	gar1	51	99.074	ENSSLDG00000023264	gar1	51	99.074	Seriola_lalandi_dorsalis
ENSAPOG00000019754	gar1	68	80.690	ENSSPUG00000008707	GAR1	59	94.340	Sphenodon_punctatus
ENSAPOG00000019754	gar1	52	92.727	ENSSSCG00000009137	GAR1	53	94.393	Sus_scrofa
ENSAPOG00000019754	gar1	51	96.296	ENSTRUG00000020580	gar1	52	96.296	Takifugu_rubripes
ENSAPOG00000019754	gar1	50	99.048	ENSTNIG00000013023	gar1	61	99.074	Tetraodon_nigroviridis
ENSAPOG00000019754	gar1	50	94.393	ENSUMAG00000000776	GAR1	69	91.549	Ursus_maritimus
ENSAPOG00000019754	gar1	50	94.393	ENSVVUG00000017612	GAR1	55	94.393	Vulpes_vulpes