EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000019970 (Gene tree)
Gene ID: 110948515
Gene Symbol: zgc:171482
Alias: -
Full Name: zinc finger matrin-type protein 4-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 42363 bases
Position: chrMVNR01000078.1:207146-249508
Accession: 110948515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000016823	zf-met	PF12874.7	1.9e-27	1	4
ENSAPOP00000016823	zf-met	PF12874.7	1.9e-27	2	4
ENSAPOP00000016823	zf-met	PF12874.7	1.9e-27	3	4
ENSAPOP00000016823	zf-met	PF12874.7	1.9e-27	4	4
ENSAPOP00000016837	zf-met	PF12874.7	4.8e-07	1	1
ENSAPOP00000016823	zf-C2H2_jaz	PF12171.8	8.8e-21	1	2
ENSAPOP00000016823	zf-C2H2_jaz	PF12171.8	8.8e-21	2	2
ENSAPOP00000016837	zf-C2H2_jaz	PF12171.8	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000025918	-	651	XM_022190068	ENSAPOP00000016823	216 (aa)	XP_022045760	-
ENSAPOT00000025958	-	1224	-	ENSAPOP00000016837	219 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000019970's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000019970's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000019970	zgc:171482	97	53.846	ENSAPOG00000007448	zmat4a	98	53.846
ENSAPOG00000019970	zgc:171482	50	36.134	ENSAPOG00000015037	zmat3	71	36.134
ENSAPOG00000019970	zgc:171482	96	40.265	ENSAPOG00000006793	znf346	77	42.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000019970	zgc:171482	79	99.145	ENSACIG00000021512	zgc:171482	87	99.145	Amphilophus_citrinellus
ENSAPOG00000019970	zgc:171482	79	98.387	ENSAOCG00000000751	zgc:171482	91	98.387	Amphiprion_ocellaris
ENSAPOG00000019970	zgc:171482	79	96.183	ENSAPEG00000014154	zgc:171482	94	96.183	Amphiprion_percula
ENSAPOG00000019970	zgc:171482	100	87.946	ENSATEG00000001371	zgc:171482	100	87.946	Anabas_testudineus
ENSAPOG00000019970	zgc:171482	79	94.656	ENSACLG00000010511	zgc:171482	91	94.656	Astatotilapia_calliptera
ENSAPOG00000019970	zgc:171482	100	85.455	ENSAMXG00000002299	zgc:171482	100	85.586	Astyanax_mexicanus
ENSAPOG00000019970	zgc:171482	100	75.309	ENSCSEG00000006509	zgc:171482	99	75.309	Cynoglossus_semilaevis
ENSAPOG00000019970	zgc:171482	100	88.987	ENSCVAG00000013606	zgc:171482	100	88.987	Cyprinodon_variegatus
ENSAPOG00000019970	zgc:171482	99	84.513	ENSDARG00000074415	zgc:171482	97	84.513	Danio_rerio
ENSAPOG00000019970	zgc:171482	79	93.443	ENSELUG00000021817	zgc:171482	94	88.462	Esox_lucius
ENSAPOG00000019970	zgc:171482	80	68.750	ENSELUG00000017517	-	60	84.444	Esox_lucius
ENSAPOG00000019970	zgc:171482	100	88.546	ENSFHEG00000002233	zgc:171482	100	88.546	Fundulus_heteroclitus
ENSAPOG00000019970	zgc:171482	100	89.189	ENSGMOG00000010508	zgc:171482	100	89.189	Gadus_morhua
ENSAPOG00000019970	zgc:171482	100	98.319	ENSGAFG00000009398	zgc:171482	99	77.019	Gambusia_affinis
ENSAPOG00000019970	zgc:171482	100	88.362	ENSGACG00000007680	zgc:171482	100	88.362	Gasterosteus_aculeatus
ENSAPOG00000019970	zgc:171482	79	94.615	ENSHBUG00000023289	zgc:171482	98	94.615	Haplochromis_burtoni
ENSAPOG00000019970	zgc:171482	79	89.683	ENSHCOG00000018086	zgc:171482	94	89.683	Hippocampus_comes
ENSAPOG00000019970	zgc:171482	79	94.872	ENSIPUG00000000361	zgc:171482	85	94.872	Ictalurus_punctatus
ENSAPOG00000019970	zgc:171482	100	90.367	ENSKMAG00000005077	zgc:171482	86	90.367	Kryptolebias_marmoratus
ENSAPOG00000019970	zgc:171482	79	93.023	ENSLBEG00000023823	zgc:171482	92	93.023	Labrus_bergylta
ENSAPOG00000019970	zgc:171482	100	81.938	ENSLOCG00000008863	zgc:171482	97	83.260	Lepisosteus_oculatus
ENSAPOG00000019970	zgc:171482	99	96.774	ENSMAMG00000001031	zgc:171482	81	95.349	Mastacembelus_armatus
ENSAPOG00000019970	zgc:171482	100	86.726	ENSMZEG00005027721	zgc:171482	100	86.726	Maylandia_zebra
ENSAPOG00000019970	zgc:171482	86	97.638	ENSMMOG00000010523	zgc:171482	97	97.638	Mola_mola
ENSAPOG00000019970	zgc:171482	100	89.083	ENSMALG00000017883	zgc:171482	100	89.520	Monopterus_albus
ENSAPOG00000019970	zgc:171482	79	95.868	ENSNBRG00000021035	zgc:171482	90	95.868	Neolamprologus_brichardi
ENSAPOG00000019970	zgc:171482	99	91.150	ENSONIG00000018365	zgc:171482	98	91.150	Oreochromis_niloticus
ENSAPOG00000019970	zgc:171482	100	88.106	ENSORLG00000007607	zgc:171482	100	88.106	Oryzias_latipes
ENSAPOG00000019970	zgc:171482	100	85.153	ENSORLG00020003563	zgc:171482	100	85.590	Oryzias_latipes_hni
ENSAPOG00000019970	zgc:171482	100	88.106	ENSORLG00015008552	zgc:171482	100	88.106	Oryzias_latipes_hsok
ENSAPOG00000019970	zgc:171482	79	94.574	ENSOMEG00000003526	zgc:171482	91	94.574	Oryzias_melastigma
ENSAPOG00000019970	zgc:171482	79	90.909	ENSPKIG00000016244	zgc:171482	86	83.333	Paramormyrops_kingsleyae
ENSAPOG00000019970	zgc:171482	86	91.129	ENSPKIG00000015911	-	86	91.129	Paramormyrops_kingsleyae
ENSAPOG00000019970	zgc:171482	99	84.100	ENSPMGG00000020230	zgc:171482	100	84.100	Periophthalmus_magnuspinnatus
ENSAPOG00000019970	zgc:171482	99	86.192	ENSPFOG00000001974	zgc:171482	96	86.192	Poecilia_formosa
ENSAPOG00000019970	zgc:171482	100	94.470	ENSPLAG00000003327	zgc:171482	100	94.470	Poecilia_latipinna
ENSAPOG00000019970	zgc:171482	100	88.991	ENSPMEG00000004988	zgc:171482	100	88.991	Poecilia_mexicana
ENSAPOG00000019970	zgc:171482	88	93.798	ENSPREG00000019241	zgc:171482	93	93.798	Poecilia_reticulata
ENSAPOG00000019970	zgc:171482	79	94.656	ENSPNYG00000007773	zgc:171482	91	94.656	Pundamilia_nyererei
ENSAPOG00000019970	zgc:171482	99	82.096	ENSPNAG00000007619	zgc:171482	97	84.279	Pygocentrus_nattereri
ENSAPOG00000019970	zgc:171482	79	89.744	ENSSFOG00015016149	zgc:171482	94	89.744	Scleropages_formosus
ENSAPOG00000019970	zgc:171482	87	83.846	ENSSFOG00015021238	zgc:171482	78	90.517	Scleropages_formosus
ENSAPOG00000019970	zgc:171482	79	96.063	ENSSMAG00000002715	zgc:171482	81	96.063	Scophthalmus_maximus
ENSAPOG00000019970	zgc:171482	79	95.312	ENSSDUG00000008773	zgc:171482	90	95.312	Seriola_dumerili
ENSAPOG00000019970	zgc:171482	79	95.312	ENSSLDG00000019510	zgc:171482	90	95.312	Seriola_lalandi_dorsalis
ENSAPOG00000019970	zgc:171482	79	99.194	ENSSPAG00000013724	zgc:171482	98	99.194	Stegastes_partitus
ENSAPOG00000019970	zgc:171482	84	92.248	ENSTRUG00000005705	zgc:171482	76	92.248	Takifugu_rubripes
ENSAPOG00000019970	zgc:171482	100	76.754	ENSTNIG00000008679	zgc:171482	100	76.754	Tetraodon_nigroviridis
ENSAPOG00000019970	zgc:171482	83	61.151	ENSXETG00000013525	zmat4	83	63.566	Xenopus_tropicalis
ENSAPOG00000019970	zgc:171482	100	86.777	ENSXMAG00000002641	zgc:171482	99	69.939	Xiphophorus_maculatus