EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000020101 (Gene tree)
Gene ID: 110956654
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 42133 bases
Position: chrMVNR01000487.1:210133-252265
Accession: 110956654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000016932	La	PF05383.17	7.7e-21	1	1
ENSAPOP00000016934	La	PF05383.17	7.8e-21	1	1
ENSAPOP00000016949	La	PF05383.17	8.1e-21	1	1
ENSAPOP00000032303	La	PF05383.17	8.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000026062	-	4465	-	ENSAPOP00000016934	1048 (aa)	-	-
ENSAPOT00000026101	-	4366	-	ENSAPOP00000016932	1015 (aa)	-	-
ENSAPOT00000026103	-	4630	-	ENSAPOP00000032303	1103 (aa)	-	-
ENSAPOT00000033841	-	4543	XM_022202273	ENSAPOP00000016949	1074 (aa)	XP_022057965	UPI000B9078A7

Gene Model

Click here to download ENSAPOG00000020101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000020101's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000020101	larp1b	91	39.634	ENSAPOG00000020685	larp1	93	77.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000020101	larp1b	88	55.388	ENSG00000138709	LARP1B	97	56.742	Homo_sapiens
ENSAPOG00000020101	larp1b	54	52.122	ENSAMEG00000002748	LARP1B	100	51.952	Ailuropoda_melanoleuca
ENSAPOG00000020101	larp1b	100	78.613	ENSACIG00000023890	larp1b	100	78.420	Amphilophus_citrinellus
ENSAPOG00000020101	larp1b	90	88.587	ENSAOCG00000014268	larp1b	99	89.022	Amphiprion_ocellaris
ENSAPOG00000020101	larp1b	100	94.613	ENSAPEG00000004126	larp1b	100	94.417	Amphiprion_percula
ENSAPOG00000020101	larp1b	100	84.907	ENSATEG00000017849	larp1b	100	84.907	Anabas_testudineus
ENSAPOG00000020101	larp1b	84	52.929	ENSAPLG00000010129	LARP1B	100	54.028	Anas_platyrhynchos
ENSAPOG00000020101	larp1b	85	57.053	ENSACAG00000011338	LARP1B	99	55.172	Anolis_carolinensis
ENSAPOG00000020101	larp1b	65	53.259	ENSANAG00000034618	LARP1B	83	54.249	Aotus_nancymaae
ENSAPOG00000020101	larp1b	100	81.404	ENSACLG00000011948	larp1b	100	81.404	Astatotilapia_calliptera
ENSAPOG00000020101	larp1b	99	57.061	ENSAMXG00000006805	larp1b	90	61.687	Astyanax_mexicanus
ENSAPOG00000020101	larp1b	87	57.551	ENSBTAG00000012135	LARP1B	95	52.030	Bos_taurus
ENSAPOG00000020101	larp1b	84	56.908	ENSCJAG00000003338	LARP1B	99	57.714	Callithrix_jacchus
ENSAPOG00000020101	larp1b	83	59.836	ENSCAFG00000003831	LARP1B	99	59.602	Canis_familiaris
ENSAPOG00000020101	larp1b	85	57.158	ENSCAFG00020018899	LARP1B	95	58.043	Canis_lupus_dingo
ENSAPOG00000020101	larp1b	85	56.720	ENSCHIG00000023144	LARP1B	99	54.947	Capra_hircus
ENSAPOG00000020101	larp1b	84	56.602	ENSCCAG00000021948	LARP1B	97	56.865	Cebus_capucinus
ENSAPOG00000020101	larp1b	83	56.326	ENSCATG00000013541	LARP1B	97	56.156	Cercocebus_atys
ENSAPOG00000020101	larp1b	83	57.018	ENSCSAG00000003582	LARP1B	97	57.497	Chlorocebus_sabaeus
ENSAPOG00000020101	larp1b	84	52.694	ENSCHOG00000005354	LARP1B	97	53.429	Choloepus_hoffmanni
ENSAPOG00000020101	larp1b	89	55.334	ENSCPBG00000017480	LARP1B	89	56.544	Chrysemys_picta_bellii
ENSAPOG00000020101	larp1b	82	56.839	ENSCANG00000026958	LARP1B	97	57.384	Colobus_angolensis_palliatus
ENSAPOG00000020101	larp1b	100	75.045	ENSCSEG00000013519	larp1b	100	75.605	Cynoglossus_semilaevis
ENSAPOG00000020101	larp1b	100	82.598	ENSCVAG00000005046	larp1b	100	78.428	Cyprinodon_variegatus
ENSAPOG00000020101	larp1b	98	62.885	ENSDARG00000061169	larp1b	92	64.770	Danio_rerio
ENSAPOG00000020101	larp1b	51	48.854	ENSDNOG00000018765	-	98	50.558	Dasypus_novemcinctus
ENSAPOG00000020101	larp1b	75	54.806	ENSETEG00000012497	LARP1B	85	56.315	Echinops_telfairi
ENSAPOG00000020101	larp1b	85	46.116	ENSEBUG00000003668	larp1b	93	46.246	Eptatretus_burgeri
ENSAPOG00000020101	larp1b	85	56.852	ENSEASG00005018106	LARP1B	99	55.584	Equus_asinus_asinus
ENSAPOG00000020101	larp1b	90	55.800	ENSECAG00000001088	LARP1B	84	56.718	Equus_caballus
ENSAPOG00000020101	larp1b	76	62.754	ENSELUG00000023774	larp1b	99	58.134	Esox_lucius
ENSAPOG00000020101	larp1b	51	49.642	ENSFCAG00000014650	-	99	49.642	Felis_catus
ENSAPOG00000020101	larp1b	85	54.246	ENSFALG00000008098	LARP1B	96	54.839	Ficedula_albicollis
ENSAPOG00000020101	larp1b	100	82.785	ENSFHEG00000010264	larp1b	97	82.785	Fundulus_heteroclitus
ENSAPOG00000020101	larp1b	88	69.737	ENSGMOG00000005207	larp1b	85	75.646	Gadus_morhua
ENSAPOG00000020101	larp1b	88	54.108	ENSGALG00000010207	LARP1B	91	54.668	Gallus_gallus
ENSAPOG00000020101	larp1b	89	82.299	ENSGAFG00000012012	larp1b	99	81.364	Gambusia_affinis
ENSAPOG00000020101	larp1b	100	70.275	ENSGACG00000004609	larp1b	100	71.162	Gasterosteus_aculeatus
ENSAPOG00000020101	larp1b	89	55.466	ENSGAGG00000017209	LARP1B	89	57.684	Gopherus_agassizii
ENSAPOG00000020101	larp1b	83	56.703	ENSGGOG00000015900	LARP1B	97	56.634	Gorilla_gorilla
ENSAPOG00000020101	larp1b	100	82.752	ENSHBUG00000009730	larp1b	100	82.655	Haplochromis_burtoni
ENSAPOG00000020101	larp1b	69	79.635	ENSHCOG00000000918	larp1b	96	82.006	Hippocampus_comes
ENSAPOG00000020101	larp1b	95	64.824	ENSIPUG00000012138	larp1b	89	64.220	Ictalurus_punctatus
ENSAPOG00000020101	larp1b	99	77.920	ENSKMAG00000011589	larp1b	100	78.803	Kryptolebias_marmoratus
ENSAPOG00000020101	larp1b	100	81.827	ENSLBEG00000005655	larp1b	100	81.924	Labrus_bergylta
ENSAPOG00000020101	larp1b	91	58.607	ENSLACG00000015247	LARP1B	88	59.697	Latimeria_chalumnae
ENSAPOG00000020101	larp1b	89	64.951	ENSLOCG00000010684	larp1b	98	60.020	Lepisosteus_oculatus
ENSAPOG00000020101	larp1b	83	57.536	ENSMFAG00000002218	LARP1B	97	57.343	Macaca_fascicularis
ENSAPOG00000020101	larp1b	83	57.536	ENSMMUG00000021347	LARP1B	97	57.343	Macaca_mulatta
ENSAPOG00000020101	larp1b	82	54.095	ENSMNEG00000030406	LARP1B	97	54.273	Macaca_nemestrina
ENSAPOG00000020101	larp1b	82	56.604	ENSMLEG00000009306	LARP1B	97	56.920	Mandrillus_leucophaeus
ENSAPOG00000020101	larp1b	99	86.404	ENSMAMG00000000081	larp1b	99	86.207	Mastacembelus_armatus
ENSAPOG00000020101	larp1b	76	84.527	ENSMZEG00005002545	larp1b	100	84.655	Maylandia_zebra
ENSAPOG00000020101	larp1b	80	57.066	ENSMGAG00000004809	LARP1B	99	51.337	Meleagris_gallopavo
ENSAPOG00000020101	larp1b	85	57.614	ENSMICG00000036111	LARP1B	97	58.689	Microcebus_murinus
ENSAPOG00000020101	larp1b	50	37.345	ENSMICG00000028052	-	97	40.900	Microcebus_murinus
ENSAPOG00000020101	larp1b	91	54.366	ENSMODG00000012300	LARP1B	92	54.039	Monodelphis_domestica
ENSAPOG00000020101	larp1b	100	84.375	ENSMALG00000003638	larp1b	100	84.375	Monopterus_albus
ENSAPOG00000020101	larp1b	88	56.053	ENSMPUG00000017365	LARP1B	86	55.992	Mustela_putorius_furo
ENSAPOG00000020101	larp1b	84	55.462	ENSMLUG00000010229	LARP1B	99	55.699	Myotis_lucifugus
ENSAPOG00000020101	larp1b	93	77.960	ENSNBRG00000023846	larp1b	100	77.848	Neolamprologus_brichardi
ENSAPOG00000020101	larp1b	83	56.641	ENSNLEG00000013819	LARP1B	97	56.573	Nomascus_leucogenys
ENSAPOG00000020101	larp1b	64	59.912	ENSMEUG00000010308	LARP1B	74	60.296	Notamacropus_eugenii
ENSAPOG00000020101	larp1b	76	53.069	ENSOPRG00000005478	LARP1B	84	59.016	Ochotona_princeps
ENSAPOG00000020101	larp1b	88	81.237	ENSONIG00000012386	larp1b	100	79.641	Oreochromis_niloticus
ENSAPOG00000020101	larp1b	85	54.392	ENSOCUG00000013330	LARP1B	95	55.991	Oryctolagus_cuniculus
ENSAPOG00000020101	larp1b	97	77.545	ENSORLG00000017954	larp1b	100	77.304	Oryzias_latipes
ENSAPOG00000020101	larp1b	100	75.799	ENSORLG00020013081	larp1b	100	75.982	Oryzias_latipes_hni
ENSAPOG00000020101	larp1b	100	77.401	ENSORLG00015009580	larp1b	100	77.401	Oryzias_latipes_hsok
ENSAPOG00000020101	larp1b	100	79.942	ENSOMEG00000004210	larp1b	100	80.911	Oryzias_melastigma
ENSAPOG00000020101	larp1b	83	58.096	ENSOGAG00000005771	LARP1B	100	57.456	Otolemur_garnettii
ENSAPOG00000020101	larp1b	85	56.867	ENSOARG00000015300	LARP1B	97	56.774	Ovis_aries
ENSAPOG00000020101	larp1b	83	56.923	ENSPPAG00000030439	LARP1B	97	56.850	Pan_paniscus
ENSAPOG00000020101	larp1b	51	48.772	ENSPPRG00000002743	-	99	49.642	Panthera_pardus
ENSAPOG00000020101	larp1b	51	48.858	ENSPTIG00000011225	LARP1B	99	49.731	Panthera_tigris_altaica
ENSAPOG00000020101	larp1b	83	56.813	ENSPTRG00000016437	LARP1B	97	56.742	Pan_troglodytes
ENSAPOG00000020101	larp1b	83	57.536	ENSPANG00000012488	LARP1B	97	57.343	Papio_anubis
ENSAPOG00000020101	larp1b	84	59.524	ENSPKIG00000014360	larp1b	95	55.434	Paramormyrops_kingsleyae
ENSAPOG00000020101	larp1b	87	56.314	ENSPSIG00000012885	LARP1B	99	57.447	Pelodiscus_sinensis
ENSAPOG00000020101	larp1b	76	73.842	ENSPMGG00000007207	larp1b	88	77.853	Periophthalmus_magnuspinnatus
ENSAPOG00000020101	larp1b	77	55.866	ENSPMAG00000002700	larp1b	96	49.043	Petromyzon_marinus
ENSAPOG00000020101	larp1b	87	56.718	ENSPCIG00000026516	LARP1B	99	61.691	Phascolarctos_cinereus
ENSAPOG00000020101	larp1b	100	79.277	ENSPFOG00000019519	larp1b	100	79.101	Poecilia_formosa
ENSAPOG00000020101	larp1b	63	77.033	ENSPFOG00000022837	-	99	77.033	Poecilia_formosa
ENSAPOG00000020101	larp1b	100	80.145	ENSPLAG00000007115	larp1b	100	80.145	Poecilia_latipinna
ENSAPOG00000020101	larp1b	100	81.635	ENSPMEG00000001224	larp1b	100	81.635	Poecilia_mexicana
ENSAPOG00000020101	larp1b	84	55.076	ENSPCAG00000007546	LARP1B	97	55.603	Procavia_capensis
ENSAPOG00000020101	larp1b	74	67.742	ENSPCOG00000021874	LARP1B	96	69.748	Propithecus_coquereli
ENSAPOG00000020101	larp1b	85	52.729	ENSPVAG00000005373	LARP1B	97	54.011	Pteropus_vampyrus
ENSAPOG00000020101	larp1b	76	82.620	ENSPNYG00000017357	larp1b	100	82.368	Pundamilia_nyererei
ENSAPOG00000020101	larp1b	99	60.491	ENSPNAG00000008823	larp1b	92	63.460	Pygocentrus_nattereri
ENSAPOG00000020101	larp1b	51	48.682	ENSRBIG00000039982	-	97	50.926	Rhinopithecus_bieti
ENSAPOG00000020101	larp1b	83	57.426	ENSRROG00000030771	LARP1B	97	57.343	Rhinopithecus_roxellana
ENSAPOG00000020101	larp1b	62	52.017	ENSSHAG00000014474	LARP1B	99	52.482	Sarcophilus_harrisii
ENSAPOG00000020101	larp1b	89	82.080	ENSSMAG00000006347	larp1b	99	80.905	Scophthalmus_maximus
ENSAPOG00000020101	larp1b	100	86.060	ENSSDUG00000004182	larp1b	100	86.350	Seriola_dumerili
ENSAPOG00000020101	larp1b	98	78.239	ENSSLDG00000014613	larp1b	99	82.305	Seriola_lalandi_dorsalis
ENSAPOG00000020101	larp1b	81	58.469	ENSSPUG00000011837	LARP1B	86	70.614	Sphenodon_punctatus
ENSAPOG00000020101	larp1b	100	90.783	ENSSPAG00000017772	larp1b	100	90.968	Stegastes_partitus
ENSAPOG00000020101	larp1b	87	56.410	ENSSSCG00000034280	LARP1B	98	78.409	Sus_scrofa
ENSAPOG00000020101	larp1b	82	58.195	ENSTGUG00000002098	-	94	59.620	Taeniopygia_guttata
ENSAPOG00000020101	larp1b	99	77.593	ENSTRUG00000005612	larp1b	99	77.299	Takifugu_rubripes
ENSAPOG00000020101	larp1b	91	76.732	ENSTNIG00000012398	larp1b	100	77.586	Tetraodon_nigroviridis
ENSAPOG00000020101	larp1b	63	51.830	ENSTBEG00000004177	LARP1B	73	51.830	Tupaia_belangeri
ENSAPOG00000020101	larp1b	75	58.243	ENSTTRG00000012984	LARP1B	89	58.243	Tursiops_truncatus
ENSAPOG00000020101	larp1b	86	57.066	ENSUMAG00000007373	LARP1B	95	57.835	Ursus_maritimus
ENSAPOG00000020101	larp1b	84	48.079	ENSVPAG00000007223	LARP1B	98	47.340	Vicugna_pacos
ENSAPOG00000020101	larp1b	85	56.731	ENSVVUG00000011307	LARP1B	99	57.486	Vulpes_vulpes
ENSAPOG00000020101	larp1b	89	52.503	ENSXETG00000022512	larp1b	93	52.352	Xenopus_tropicalis
ENSAPOG00000020101	larp1b	88	73.048	ENSXCOG00000004435	larp1b	95	74.811	Xiphophorus_couchianus
ENSAPOG00000020101	larp1b	100	79.946	ENSXMAG00000008150	larp1b	100	80.036	Xiphophorus_maculatus