EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000020341 (Gene tree)
Gene ID: 110957849
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 60962 bases
Position: chrMVNR01000003.1:1524252-1585213
Accession: 110957849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000017172	R3H	PF01424.22	9e-11	1	1
ENSAPOP00000032428	R3H	PF01424.22	9.4e-11	1	1
ENSAPOP00000032439	R3H	PF01424.22	9.4e-11	1	1
ENSAPOP00000017155	R3H	PF01424.22	9.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000026344	-	5566	XM_022204090	ENSAPOP00000017155	1075 (aa)	XP_022059782	UPI000B90087A
ENSAPOT00000026361	-	6217	-	ENSAPOP00000017172	995 (aa)	-	-
ENSAPOT00000026349	-	5946	XM_022204913	ENSAPOP00000032428	1024 (aa)	XP_022060605	UPI000B8FEAE7
ENSAPOT00000033953	-	6304	-	ENSAPOP00000032439	1024 (aa)	-	UPI000B8FEAE7

Gene Model

Click here to download ENSAPOG00000020341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000020341's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000020341	r3hdm2	79	56.268	ENSAPOG00000020850	r3hdm1	76	63.469
ENSAPOG00000020341	r3hdm2	56	37.937	ENSAPOG00000021873	-	70	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000020341	r3hdm2	99	65.863	ENSG00000179912	R3HDM2	99	66.215	Homo_sapiens
ENSAPOG00000020341	r3hdm2	95	67.627	ENSAMEG00000004812	R3HDM2	99	65.146	Ailuropoda_melanoleuca
ENSAPOG00000020341	r3hdm2	94	90.292	ENSACIG00000016146	r3hdm2	98	90.292	Amphilophus_citrinellus
ENSAPOG00000020341	r3hdm2	100	99.535	ENSAOCG00000023694	r3hdm2	100	99.535	Amphiprion_ocellaris
ENSAPOG00000020341	r3hdm2	100	99.414	ENSAPEG00000008851	r3hdm2	100	99.414	Amphiprion_percula
ENSAPOG00000020341	r3hdm2	100	95.914	ENSATEG00000025024	r3hdm2	100	95.914	Anabas_testudineus
ENSAPOG00000020341	r3hdm2	100	56.017	ENSAPLG00000004298	R3HDM2	99	60.124	Anas_platyrhynchos
ENSAPOG00000020341	r3hdm2	99	63.292	ENSACAG00000006388	R3HDM2	99	62.287	Anolis_carolinensis
ENSAPOG00000020341	r3hdm2	99	66.376	ENSANAG00000025397	-	99	66.118	Aotus_nancymaae
ENSAPOG00000020341	r3hdm2	97	64.407	ENSANAG00000031310	-	98	62.586	Aotus_nancymaae
ENSAPOG00000020341	r3hdm2	100	97.395	ENSACLG00000019106	r3hdm2	100	97.395	Astatotilapia_calliptera
ENSAPOG00000020341	r3hdm2	94	69.909	ENSAMXG00000017180	r3hdm2	99	72.177	Astyanax_mexicanus
ENSAPOG00000020341	r3hdm2	96	67.608	ENSBTAG00000018361	R3HDM2	99	65.761	Bos_taurus
ENSAPOG00000020341	r3hdm2	99	66.149	ENSCJAG00000007365	R3HDM2	99	65.927	Callithrix_jacchus
ENSAPOG00000020341	r3hdm2	95	67.745	ENSCAFG00000000215	R3HDM2	99	66.184	Canis_familiaris
ENSAPOG00000020341	r3hdm2	95	67.850	ENSCAFG00020023713	R3HDM2	99	66.279	Canis_lupus_dingo
ENSAPOG00000020341	r3hdm2	95	68.154	ENSCHIG00000014022	R3HDM2	99	66.149	Capra_hircus
ENSAPOG00000020341	r3hdm2	99	65.377	ENSTSYG00000001449	R3HDM2	99	65.604	Carlito_syrichta
ENSAPOG00000020341	r3hdm2	99	66.390	ENSCPOG00000009217	R3HDM2	99	65.743	Cavia_porcellus
ENSAPOG00000020341	r3hdm2	86	67.817	ENSCCAG00000026083	R3HDM2	99	67.853	Cebus_capucinus
ENSAPOG00000020341	r3hdm2	99	65.670	ENSCATG00000036929	R3HDM2	99	66.021	Cercocebus_atys
ENSAPOG00000020341	r3hdm2	96	68.012	ENSCLAG00000011997	R3HDM2	99	66.113	Chinchilla_lanigera
ENSAPOG00000020341	r3hdm2	99	65.530	ENSCSAG00000004911	R3HDM2	99	64.793	Chlorocebus_sabaeus
ENSAPOG00000020341	r3hdm2	73	66.867	ENSCHOG00000005636	R3HDM2	89	68.537	Choloepus_hoffmanni
ENSAPOG00000020341	r3hdm2	95	65.789	ENSCPBG00000013922	R3HDM2	99	63.153	Chrysemys_picta_bellii
ENSAPOG00000020341	r3hdm2	99	66.182	ENSCANG00000043807	R3HDM2	99	66.021	Colobus_angolensis_palliatus
ENSAPOG00000020341	r3hdm2	99	64.641	ENSCGRG00001017324	R3hdm2	99	63.315	Cricetulus_griseus_chok1gshd
ENSAPOG00000020341	r3hdm2	99	64.641	ENSCGRG00000003862	R3hdm2	99	63.315	Cricetulus_griseus_crigri
ENSAPOG00000020341	r3hdm2	100	92.258	ENSCSEG00000010925	r3hdm2	100	91.797	Cynoglossus_semilaevis
ENSAPOG00000020341	r3hdm2	100	90.850	ENSCVAG00000009058	r3hdm2	100	89.945	Cyprinodon_variegatus
ENSAPOG00000020341	r3hdm2	94	74.538	ENSDARG00000102610	r3hdm2	99	75.437	Danio_rerio
ENSAPOG00000020341	r3hdm2	99	64.522	ENSDNOG00000015033	R3HDM2	100	67.015	Dasypus_novemcinctus
ENSAPOG00000020341	r3hdm2	95	64.061	ENSDORG00000011462	R3hdm2	99	64.199	Dipodomys_ordii
ENSAPOG00000020341	r3hdm2	96	67.881	ENSEASG00005007091	R3HDM2	99	66.297	Equus_asinus_asinus
ENSAPOG00000020341	r3hdm2	96	67.689	ENSECAG00000003157	R3HDM2	99	66.113	Equus_caballus
ENSAPOG00000020341	r3hdm2	100	81.144	ENSELUG00000015969	r3hdm2	100	80.161	Esox_lucius
ENSAPOG00000020341	r3hdm2	96	67.658	ENSFCAG00000000192	R3HDM2	98	65.226	Felis_catus
ENSAPOG00000020341	r3hdm2	81	63.791	ENSFALG00000000255	R3HDM2	99	61.063	Ficedula_albicollis
ENSAPOG00000020341	r3hdm2	95	67.981	ENSFDAG00000019385	R3HDM2	99	65.498	Fukomys_damarensis
ENSAPOG00000020341	r3hdm2	100	91.035	ENSFHEG00000016484	r3hdm2	100	90.959	Fundulus_heteroclitus
ENSAPOG00000020341	r3hdm2	52	37.415	ENSFHEG00000007936	-	67	39.368	Fundulus_heteroclitus
ENSAPOG00000020341	r3hdm2	95	83.252	ENSGMOG00000007961	r3hdm2	100	83.836	Gadus_morhua
ENSAPOG00000020341	r3hdm2	99	65.587	ENSGALG00000043736	R3HDM2	99	62.162	Gallus_gallus
ENSAPOG00000020341	r3hdm2	100	92.606	ENSGAFG00000013887	r3hdm2	100	91.605	Gambusia_affinis
ENSAPOG00000020341	r3hdm2	95	92.218	ENSGACG00000006442	r3hdm2	100	92.323	Gasterosteus_aculeatus
ENSAPOG00000020341	r3hdm2	95	65.038	ENSGAGG00000017797	R3HDM2	99	61.740	Gopherus_agassizii
ENSAPOG00000020341	r3hdm2	99	65.670	ENSGGOG00000015007	R3HDM2	99	66.021	Gorilla_gorilla
ENSAPOG00000020341	r3hdm2	92	61.688	ENSHGLG00000010421	-	97	60.043	Heterocephalus_glaber_female
ENSAPOG00000020341	r3hdm2	96	68.012	ENSHGLG00000010434	-	99	65.836	Heterocephalus_glaber_female
ENSAPOG00000020341	r3hdm2	95	59.594	ENSHGLG00100018871	-	98	58.494	Heterocephalus_glaber_male
ENSAPOG00000020341	r3hdm2	96	67.915	ENSHGLG00100004183	-	99	65.743	Heterocephalus_glaber_male
ENSAPOG00000020341	r3hdm2	100	89.844	ENSHCOG00000001142	r3hdm2	97	89.258	Hippocampus_comes
ENSAPOG00000020341	r3hdm2	100	75.656	ENSIPUG00000023873	r3hdm2	100	75.747	Ictalurus_punctatus
ENSAPOG00000020341	r3hdm2	99	61.748	ENSSTOG00000013424	R3HDM2	99	60.653	Ictidomys_tridecemlineatus
ENSAPOG00000020341	r3hdm2	99	65.434	ENSJJAG00000010001	R3hdm2	99	65.133	Jaculus_jaculus
ENSAPOG00000020341	r3hdm2	100	93.438	ENSKMAG00000012695	r3hdm2	97	93.346	Kryptolebias_marmoratus
ENSAPOG00000020341	r3hdm2	50	41.312	ENSLBEG00000002779	-	84	39.037	Labrus_bergylta
ENSAPOG00000020341	r3hdm2	100	94.635	ENSLBEG00000013115	r3hdm2	96	94.635	Labrus_bergylta
ENSAPOG00000020341	r3hdm2	95	67.246	ENSLACG00000019064	r3hdm2	100	65.184	Latimeria_chalumnae
ENSAPOG00000020341	r3hdm2	99	75.558	ENSLOCG00000005976	r3hdm2	99	75.849	Lepisosteus_oculatus
ENSAPOG00000020341	r3hdm2	99	66.481	ENSLAFG00000006510	R3HDM2	99	66.605	Loxodonta_africana
ENSAPOG00000020341	r3hdm2	99	66.279	ENSMFAG00000036385	R3HDM2	99	66.312	Macaca_fascicularis
ENSAPOG00000020341	r3hdm2	99	66.697	ENSMMUG00000021789	R3HDM2	99	66.728	Macaca_mulatta
ENSAPOG00000020341	r3hdm2	99	66.279	ENSMNEG00000025314	R3HDM2	99	66.312	Macaca_nemestrina
ENSAPOG00000020341	r3hdm2	99	65.767	ENSMLEG00000028915	R3HDM2	99	66.118	Mandrillus_leucophaeus
ENSAPOG00000020341	r3hdm2	54	37.043	ENSMAMG00000011755	-	73	38.931	Mastacembelus_armatus
ENSAPOG00000020341	r3hdm2	100	95.930	ENSMAMG00000009793	r3hdm2	100	95.930	Mastacembelus_armatus
ENSAPOG00000020341	r3hdm2	100	97.395	ENSMZEG00005007319	r3hdm2	100	97.395	Maylandia_zebra
ENSAPOG00000020341	r3hdm2	96	67.372	ENSMICG00000012389	R3HDM2	99	65.795	Microcebus_murinus
ENSAPOG00000020341	r3hdm2	99	65.285	ENSMOCG00000014425	R3hdm2	99	63.768	Microtus_ochrogaster
ENSAPOG00000020341	r3hdm2	95	88.592	ENSMMOG00000007448	r3hdm2	99	86.831	Mola_mola
ENSAPOG00000020341	r3hdm2	87	87.631	ENSMALG00000010211	r3hdm2	98	85.813	Monopterus_albus
ENSAPOG00000020341	r3hdm2	95	67.148	MGP_CAROLIEiJ_G0015896	R3hdm2	99	65.225	Mus_caroli
ENSAPOG00000020341	r3hdm2	99	65.685	ENSMUSG00000025404	R3hdm2	99	65.409	Mus_musculus
ENSAPOG00000020341	r3hdm2	95	67.148	MGP_PahariEiJ_G0031189	R3hdm2	99	65.133	Mus_pahari
ENSAPOG00000020341	r3hdm2	99	65.593	MGP_SPRETEiJ_G0016722	R3hdm2	99	65.317	Mus_spretus
ENSAPOG00000020341	r3hdm2	98	65.607	ENSMPUG00000001818	R3HDM2	96	65.116	Mustela_putorius_furo
ENSAPOG00000020341	r3hdm2	96	67.720	ENSMLUG00000004980	R3HDM2	99	65.743	Myotis_lucifugus
ENSAPOG00000020341	r3hdm2	99	66.081	ENSNGAG00000018800	R3hdm2	99	66.020	Nannospalax_galili
ENSAPOG00000020341	r3hdm2	94	90.984	ENSNBRG00000004483	r3hdm2	100	90.984	Neolamprologus_brichardi
ENSAPOG00000020341	r3hdm2	99	66.149	ENSNLEG00000017351	R3HDM2	99	66.118	Nomascus_leucogenys
ENSAPOG00000020341	r3hdm2	99	57.288	ENSMEUG00000008588	R3HDM2	99	56.406	Notamacropus_eugenii
ENSAPOG00000020341	r3hdm2	99	59.884	ENSOPRG00000013670	R3HDM2	99	59.496	Ochotona_princeps
ENSAPOG00000020341	r3hdm2	100	94.732	ENSONIG00000005075	r3hdm2	100	94.732	Oreochromis_niloticus
ENSAPOG00000020341	r3hdm2	99	66.022	ENSOCUG00000013258	R3HDM2	99	66.022	Oryctolagus_cuniculus
ENSAPOG00000020341	r3hdm2	100	90.657	ENSORLG00000005502	r3hdm2	100	90.111	Oryzias_latipes
ENSAPOG00000020341	r3hdm2	100	90.657	ENSORLG00020017069	r3hdm2	100	90.111	Oryzias_latipes_hni
ENSAPOG00000020341	r3hdm2	100	90.749	ENSORLG00015012735	r3hdm2	100	90.203	Oryzias_latipes_hsok
ENSAPOG00000020341	r3hdm2	100	84.473	ENSOMEG00000018079	r3hdm2	99	83.887	Oryzias_melastigma
ENSAPOG00000020341	r3hdm2	96	58.133	ENSOGAG00000027966	-	99	57.560	Otolemur_garnettii
ENSAPOG00000020341	r3hdm2	96	64.909	ENSOGAG00000012055	R3HDM2	99	63.376	Otolemur_garnettii
ENSAPOG00000020341	r3hdm2	96	67.606	ENSOARG00000006929	R3HDM2	99	65.861	Ovis_aries
ENSAPOG00000020341	r3hdm2	99	65.863	ENSPPAG00000034395	R3HDM2	99	66.215	Pan_paniscus
ENSAPOG00000020341	r3hdm2	96	67.273	ENSPPRG00000009240	R3HDM2	99	65.092	Panthera_pardus
ENSAPOG00000020341	r3hdm2	96	67.273	ENSPTIG00000008752	R3HDM2	99	65.092	Panthera_tigris_altaica
ENSAPOG00000020341	r3hdm2	99	66.376	ENSPTRG00000046457	R3HDM2	99	66.409	Pan_troglodytes
ENSAPOG00000020341	r3hdm2	95	67.339	ENSPANG00000024002	R3HDM2	97	67.713	Papio_anubis
ENSAPOG00000020341	r3hdm2	100	79.741	ENSPKIG00000003171	r3hdm2	100	79.278	Paramormyrops_kingsleyae
ENSAPOG00000020341	r3hdm2	63	56.707	ENSPSIG00000006954	R3HDM2	99	55.403	Pelodiscus_sinensis
ENSAPOG00000020341	r3hdm2	94	88.831	ENSPMGG00000007061	r3hdm2	99	87.591	Periophthalmus_magnuspinnatus
ENSAPOG00000020341	r3hdm2	99	65.250	ENSPEMG00000015964	R3hdm2	99	64.635	Peromyscus_maniculatus_bairdii
ENSAPOG00000020341	r3hdm2	99	63.793	ENSPCIG00000023841	R3HDM2	99	64.410	Phascolarctos_cinereus
ENSAPOG00000020341	r3hdm2	94	83.255	ENSPFOG00000006077	r3hdm2	92	91.738	Poecilia_formosa
ENSAPOG00000020341	r3hdm2	100	92.435	ENSPLAG00000002971	r3hdm2	100	91.481	Poecilia_latipinna
ENSAPOG00000020341	r3hdm2	100	92.435	ENSPMEG00000005330	r3hdm2	100	91.481	Poecilia_mexicana
ENSAPOG00000020341	r3hdm2	100	92.052	ENSPREG00000008424	r3hdm2	100	91.328	Poecilia_reticulata
ENSAPOG00000020341	r3hdm2	97	61.029	ENSPPYG00000004685	R3HDM2	80	61.067	Pongo_abelii
ENSAPOG00000020341	r3hdm2	88	80.505	ENSPCAG00000014642	R3HDM2	92	81.588	Procavia_capensis
ENSAPOG00000020341	r3hdm2	96	67.407	ENSPCOG00000013201	R3HDM2	99	65.858	Propithecus_coquereli
ENSAPOG00000020341	r3hdm2	99	66.113	ENSPVAG00000003967	R3HDM2	99	65.743	Pteropus_vampyrus
ENSAPOG00000020341	r3hdm2	94	88.235	ENSPNYG00000013479	r3hdm2	100	88.029	Pundamilia_nyererei
ENSAPOG00000020341	r3hdm2	100	75.769	ENSPNAG00000017473	r3hdm2	100	77.958	Pygocentrus_nattereri
ENSAPOG00000020341	r3hdm2	95	66.635	ENSRNOG00000007801	R3hdm2	99	64.738	Rattus_norvegicus
ENSAPOG00000020341	r3hdm2	99	64.341	ENSRBIG00000037403	R3HDM2	99	64.085	Rhinopithecus_bieti
ENSAPOG00000020341	r3hdm2	99	66.790	ENSRROG00000022271	R3HDM2	99	66.118	Rhinopithecus_roxellana
ENSAPOG00000020341	r3hdm2	99	66.376	ENSSBOG00000023547	R3HDM2	99	66.215	Saimiri_boliviensis_boliviensis
ENSAPOG00000020341	r3hdm2	99	63.963	ENSSHAG00000003511	R3HDM2	99	66.113	Sarcophilus_harrisii
ENSAPOG00000020341	r3hdm2	94	80.718	ENSSFOG00015011219	r3hdm2	99	79.692	Scleropages_formosus
ENSAPOG00000020341	r3hdm2	100	94.791	ENSSMAG00000012073	r3hdm2	100	94.791	Scophthalmus_maximus
ENSAPOG00000020341	r3hdm2	100	97.173	ENSSDUG00000019269	r3hdm2	100	97.173	Seriola_dumerili
ENSAPOG00000020341	r3hdm2	100	97.395	ENSSLDG00000005252	r3hdm2	100	97.395	Seriola_lalandi_dorsalis
ENSAPOG00000020341	r3hdm2	96	53.755	ENSSARG00000003958	R3HDM2	97	53.908	Sorex_araneus
ENSAPOG00000020341	r3hdm2	99	62.147	ENSSPUG00000014132	R3HDM2	99	60.620	Sphenodon_punctatus
ENSAPOG00000020341	r3hdm2	100	99.121	ENSSPAG00000022594	r3hdm2	100	99.121	Stegastes_partitus
ENSAPOG00000020341	r3hdm2	96	67.843	ENSSSCG00000026498	R3HDM2	100	66.992	Sus_scrofa
ENSAPOG00000020341	r3hdm2	72	64.751	ENSTGUG00000015881	R3HDM2	99	63.380	Taeniopygia_guttata
ENSAPOG00000020341	r3hdm2	95	88.489	ENSTRUG00000015075	r3hdm2	99	86.974	Takifugu_rubripes
ENSAPOG00000020341	r3hdm2	88	98.045	ENSTNIG00000007057	r3hdm2	99	84.206	Tetraodon_nigroviridis
ENSAPOG00000020341	r3hdm2	82	63.787	ENSTBEG00000015967	R3HDM2	78	63.787	Tupaia_belangeri
ENSAPOG00000020341	r3hdm2	88	72.423	ENSTTRG00000013082	R3HDM2	87	67.457	Tursiops_truncatus
ENSAPOG00000020341	r3hdm2	95	67.546	ENSUAMG00000020913	R3HDM2	99	63.678	Ursus_americanus
ENSAPOG00000020341	r3hdm2	94	66.526	ENSUMAG00000019179	R3HDM2	99	63.261	Ursus_maritimus
ENSAPOG00000020341	r3hdm2	90	81.311	ENSVPAG00000008656	R3HDM2	89	81.271	Vicugna_pacos
ENSAPOG00000020341	r3hdm2	93	67.917	ENSVVUG00000018014	R3HDM2	95	65.663	Vulpes_vulpes
ENSAPOG00000020341	r3hdm2	99	62.160	ENSXETG00000017153	r3hdm2	99	61.025	Xenopus_tropicalis
ENSAPOG00000020341	r3hdm2	90	89.675	ENSXCOG00000013882	r3hdm2	100	88.578	Xiphophorus_couchianus
ENSAPOG00000020341	r3hdm2	100	92.329	ENSXMAG00000017978	r3hdm2	100	91.605	Xiphophorus_maculatus