EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000020465 (Gene tree)
Gene ID: 110958937
Gene Symbol: sf3a1
Alias: si:dz150f13.2|wu:fc38e01|wu:fc50a11|wu:fj37c05
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 5456 bases
Position: chrMVNR01000653.1:206734-212189
Accession: 110958937
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000032489	PRP21_like_P	PF12230.8	1.2e-51	1	1
ENSAPOP00000032489	Surp	PF01805.20	6.3e-46	1	2
ENSAPOP00000032489	Surp	PF01805.20	6.3e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000033956	-	2745	XM_022205661	ENSAPOP00000032489	786 (aa)	XP_022061353	UPI000B9097DD

Gene Model

Click here to download ENSAPOG00000020465's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000020465's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000020465	sf3a1	99	85.032	ENSG00000099995	SF3A1	100	83.145	Homo_sapiens
ENSAPOG00000020465	sf3a1	99	85.419	ENSAMEG00000007737	SF3A1	100	83.312	Ailuropoda_melanoleuca
ENSAPOG00000020465	sf3a1	100	96.819	ENSACIG00000020672	sf3a1	100	96.819	Amphilophus_citrinellus
ENSAPOG00000020465	sf3a1	100	99.491	ENSAOCG00000003060	sf3a1	100	99.491	Amphiprion_ocellaris
ENSAPOG00000020465	sf3a1	100	99.618	ENSAPEG00000010735	sf3a1	100	99.618	Amphiprion_percula
ENSAPOG00000020465	sf3a1	97	96.863	ENSATEG00000021201	sf3a1	96	96.863	Anabas_testudineus
ENSAPOG00000020465	sf3a1	96	84.848	ENSAPLG00000009057	SF3A1	100	84.674	Anas_platyrhynchos
ENSAPOG00000020465	sf3a1	100	81.852	ENSACAG00000009415	SF3A1	100	82.346	Anolis_carolinensis
ENSAPOG00000020465	sf3a1	99	84.910	ENSANAG00000032045	SF3A1	100	83.522	Aotus_nancymaae
ENSAPOG00000020465	sf3a1	100	96.565	ENSACLG00000012622	sf3a1	100	96.565	Astatotilapia_calliptera
ENSAPOG00000020465	sf3a1	99	89.809	ENSAMXG00000005382	sf3a1	99	90.064	Astyanax_mexicanus
ENSAPOG00000020465	sf3a1	99	84.910	ENSBTAG00000003390	SF3A1	100	83.522	Bos_taurus
ENSAPOG00000020465	sf3a1	80	46.124	WBGene00004188	prp-21	59	50.508	Caenorhabditis_elegans
ENSAPOG00000020465	sf3a1	99	84.783	ENSCJAG00000010370	SF3A1	100	83.396	Callithrix_jacchus
ENSAPOG00000020465	sf3a1	99	84.910	ENSCAFG00000012559	SF3A1	100	83.522	Canis_familiaris
ENSAPOG00000020465	sf3a1	99	84.910	ENSCAFG00020000838	SF3A1	100	83.522	Canis_lupus_dingo
ENSAPOG00000020465	sf3a1	99	85.038	ENSCHIG00000018642	SF3A1	100	83.648	Capra_hircus
ENSAPOG00000020465	sf3a1	99	85.161	ENSTSYG00000004739	SF3A1	100	83.522	Carlito_syrichta
ENSAPOG00000020465	sf3a1	95	68.842	ENSCAPG00000015414	SF3A1	97	69.530	Cavia_aperea
ENSAPOG00000020465	sf3a1	99	85.161	ENSCPOG00000014589	SF3A1	100	83.522	Cavia_porcellus
ENSAPOG00000020465	sf3a1	99	84.910	ENSCCAG00000032006	SF3A1	100	83.522	Cebus_capucinus
ENSAPOG00000020465	sf3a1	99	84.783	ENSCATG00000029241	SF3A1	100	83.145	Cercocebus_atys
ENSAPOG00000020465	sf3a1	99	85.419	ENSCLAG00000006508	SF3A1	100	83.000	Chinchilla_lanigera
ENSAPOG00000020465	sf3a1	99	84.783	ENSCSAG00000009470	SF3A1	100	83.145	Chlorocebus_sabaeus
ENSAPOG00000020465	sf3a1	59	90.476	ENSCHOG00000005201	SF3A1	60	91.603	Choloepus_hoffmanni
ENSAPOG00000020465	sf3a1	100	82.346	ENSCPBG00000007595	SF3A1	100	82.219	Chrysemys_picta_bellii
ENSAPOG00000020465	sf3a1	92	63.158	ENSCSAVG00000005608	-	92	65.972	Ciona_savignyi
ENSAPOG00000020465	sf3a1	99	84.783	ENSCANG00000033564	SF3A1	100	83.145	Colobus_angolensis_palliatus
ENSAPOG00000020465	sf3a1	97	86.447	ENSCGRG00001008933	Sf3a1	100	83.522	Cricetulus_griseus_chok1gshd
ENSAPOG00000020465	sf3a1	97	86.447	ENSCGRG00000006127	Sf3a1	100	83.522	Cricetulus_griseus_crigri
ENSAPOG00000020465	sf3a1	100	92.640	ENSCSEG00000010792	sf3a1	100	92.640	Cynoglossus_semilaevis
ENSAPOG00000020465	sf3a1	100	93.266	ENSCVAG00000004560	sf3a1	100	93.266	Cyprinodon_variegatus
ENSAPOG00000020465	sf3a1	100	87.690	ENSDARG00000041887	sf3a1	100	90.909	Danio_rerio
ENSAPOG00000020465	sf3a1	99	85.309	ENSDNOG00000010629	SF3A1	100	83.166	Dasypus_novemcinctus
ENSAPOG00000020465	sf3a1	99	84.910	ENSDORG00000005613	Sf3a1	100	83.522	Dipodomys_ordii
ENSAPOG00000020465	sf3a1	83	61.582	FBgn0266917	Sf3a1	86	68.151	Drosophila_melanogaster
ENSAPOG00000020465	sf3a1	85	84.903	ENSETEG00000017194	SF3A1	95	85.501	Echinops_telfairi
ENSAPOG00000020465	sf3a1	97	68.250	ENSEBUG00000001285	sf3a1	95	70.013	Eptatretus_burgeri
ENSAPOG00000020465	sf3a1	99	85.038	ENSEASG00005010254	SF3A1	100	83.375	Equus_asinus_asinus
ENSAPOG00000020465	sf3a1	99	85.038	ENSECAG00000023962	SF3A1	100	83.375	Equus_caballus
ENSAPOG00000020465	sf3a1	74	91.803	ENSEEUG00000003159	SF3A1	83	91.803	Erinaceus_europaeus
ENSAPOG00000020465	sf3a1	100	87.706	ENSELUG00000022578	sf3a1	100	87.199	Esox_lucius
ENSAPOG00000020465	sf3a1	99	84.783	ENSFCAG00000011932	SF3A1	100	83.396	Felis_catus
ENSAPOG00000020465	sf3a1	96	84.301	ENSFALG00000006944	SF3A1	100	83.899	Ficedula_albicollis
ENSAPOG00000020465	sf3a1	99	85.032	ENSFDAG00000009560	SF3A1	100	83.145	Fukomys_damarensis
ENSAPOG00000020465	sf3a1	100	94.155	ENSFHEG00000010866	sf3a1	100	94.155	Fundulus_heteroclitus
ENSAPOG00000020465	sf3a1	100	88.422	ENSGMOG00000016024	sf3a1	100	88.422	Gadus_morhua
ENSAPOG00000020465	sf3a1	96	84.960	ENSGALG00000007937	SF3A1	100	84.151	Gallus_gallus
ENSAPOG00000020465	sf3a1	100	94.663	ENSGAFG00000009111	sf3a1	100	94.663	Gambusia_affinis
ENSAPOG00000020465	sf3a1	100	91.414	ENSGACG00000011893	sf3a1	100	90.909	Gasterosteus_aculeatus
ENSAPOG00000020465	sf3a1	96	81.711	ENSGAGG00000000762	SF3A1	99	81.711	Gopherus_agassizii
ENSAPOG00000020465	sf3a1	99	85.032	ENSGGOG00000012631	SF3A1	100	83.145	Gorilla_gorilla
ENSAPOG00000020465	sf3a1	100	96.565	ENSHBUG00000015795	sf3a1	100	96.565	Haplochromis_burtoni
ENSAPOG00000020465	sf3a1	99	84.783	ENSHGLG00000007907	SF3A1	100	83.396	Heterocephalus_glaber_female
ENSAPOG00000020465	sf3a1	99	84.783	ENSHGLG00100013799	SF3A1	100	83.396	Heterocephalus_glaber_male
ENSAPOG00000020465	sf3a1	100	90.089	ENSHCOG00000015423	sf3a1	100	89.835	Hippocampus_comes
ENSAPOG00000020465	sf3a1	98	86.788	ENSIPUG00000002470	sf3a1	98	87.630	Ictalurus_punctatus
ENSAPOG00000020465	sf3a1	97	86.013	ENSSTOG00000013892	SF3A1	100	83.648	Ictidomys_tridecemlineatus
ENSAPOG00000020465	sf3a1	99	85.290	ENSJJAG00000022566	Sf3a1	100	83.668	Jaculus_jaculus
ENSAPOG00000020465	sf3a1	100	93.893	ENSKMAG00000002400	sf3a1	100	93.893	Kryptolebias_marmoratus
ENSAPOG00000020465	sf3a1	100	93.639	ENSLBEG00000022974	sf3a1	100	93.257	Labrus_bergylta
ENSAPOG00000020465	sf3a1	100	84.450	ENSLACG00000003565	SF3A1	100	84.450	Latimeria_chalumnae
ENSAPOG00000020465	sf3a1	100	88.101	ENSLOCG00000008251	sf3a1	99	88.734	Lepisosteus_oculatus
ENSAPOG00000020465	sf3a1	99	85.294	ENSLAFG00000000448	SF3A1	100	83.648	Loxodonta_africana
ENSAPOG00000020465	sf3a1	97	56.718	ENSLAFG00000026032	-	97	56.298	Loxodonta_africana
ENSAPOG00000020465	sf3a1	99	84.655	ENSMFAG00000031979	SF3A1	100	83.019	Macaca_fascicularis
ENSAPOG00000020465	sf3a1	99	84.655	ENSMMUG00000005547	SF3A1	100	83.019	Macaca_mulatta
ENSAPOG00000020465	sf3a1	99	84.783	ENSMNEG00000037229	SF3A1	100	83.145	Macaca_nemestrina
ENSAPOG00000020465	sf3a1	99	84.783	ENSMLEG00000041908	SF3A1	100	83.145	Mandrillus_leucophaeus
ENSAPOG00000020465	sf3a1	98	96.887	ENSMAMG00000006460	sf3a1	96	96.887	Mastacembelus_armatus
ENSAPOG00000020465	sf3a1	100	96.565	ENSMZEG00005009633	sf3a1	100	96.565	Maylandia_zebra
ENSAPOG00000020465	sf3a1	96	84.960	ENSMGAG00000001330	SF3A1	99	85.455	Meleagris_gallopavo
ENSAPOG00000020465	sf3a1	93	82.153	ENSMAUG00000020317	Sf3a1	100	78.608	Mesocricetus_auratus
ENSAPOG00000020465	sf3a1	99	84.910	ENSMICG00000010038	SF3A1	100	82.516	Microcebus_murinus
ENSAPOG00000020465	sf3a1	97	86.013	ENSMOCG00000008438	Sf3a1	100	83.396	Microtus_ochrogaster
ENSAPOG00000020465	sf3a1	100	91.094	ENSMMOG00000015588	sf3a1	99	91.858	Mola_mola
ENSAPOG00000020465	sf3a1	99	83.033	ENSMODG00000009270	SF3A1	100	83.249	Monodelphis_domestica
ENSAPOG00000020465	sf3a1	100	94.684	ENSMALG00000000148	sf3a1	100	95.063	Monopterus_albus
ENSAPOG00000020465	sf3a1	99	84.833	MGP_CAROLIEiJ_G0016029	Sf3a1	99	83.439	Mus_caroli
ENSAPOG00000020465	sf3a1	99	84.833	ENSMUSG00000002129	Sf3a1	99	83.439	Mus_musculus
ENSAPOG00000020465	sf3a1	99	84.704	MGP_PahariEiJ_G0016862	Sf3a1	99	83.439	Mus_pahari
ENSAPOG00000020465	sf3a1	99	84.833	MGP_SPRETEiJ_G0016870	Sf3a1	99	83.439	Mus_spretus
ENSAPOG00000020465	sf3a1	99	84.271	ENSMPUG00000013144	SF3A1	100	83.396	Mustela_putorius_furo
ENSAPOG00000020465	sf3a1	99	85.161	ENSMLUG00000002139	SF3A1	100	83.522	Myotis_lucifugus
ENSAPOG00000020465	sf3a1	99	84.910	ENSNGAG00000016977	Sf3a1	100	83.125	Nannospalax_galili
ENSAPOG00000020465	sf3a1	100	96.066	ENSNBRG00000016642	sf3a1	100	96.066	Neolamprologus_brichardi
ENSAPOG00000020465	sf3a1	99	84.783	ENSNLEG00000003686	SF3A1	100	83.145	Nomascus_leucogenys
ENSAPOG00000020465	sf3a1	97	86.797	ENSOPRG00000016636	SF3A1	100	83.899	Ochotona_princeps
ENSAPOG00000020465	sf3a1	99	85.419	ENSODEG00000002571	SF3A1	100	83.375	Octodon_degus
ENSAPOG00000020465	sf3a1	100	96.947	ENSONIG00000010848	sf3a1	100	96.947	Oreochromis_niloticus
ENSAPOG00000020465	sf3a1	97	86.144	ENSOCUG00000007633	SF3A1	100	83.522	Oryctolagus_cuniculus
ENSAPOG00000020465	sf3a1	96	93.625	ENSORLG00000013050	sf3a1	99	93.360	Oryzias_latipes
ENSAPOG00000020465	sf3a1	99	91.165	ENSORLG00020003236	sf3a1	97	91.484	Oryzias_latipes_hni
ENSAPOG00000020465	sf3a1	100	93.257	ENSORLG00015017411	sf3a1	100	93.003	Oryzias_latipes_hsok
ENSAPOG00000020465	sf3a1	100	93.639	ENSOMEG00000013362	sf3a1	100	93.384	Oryzias_melastigma
ENSAPOG00000020465	sf3a1	99	85.290	ENSOGAG00000012931	SF3A1	100	83.396	Otolemur_garnettii
ENSAPOG00000020465	sf3a1	99	83.632	ENSOARG00000006849	SF3A1	100	82.138	Ovis_aries
ENSAPOG00000020465	sf3a1	99	84.258	ENSPPAG00000041790	SF3A1	100	82.390	Pan_paniscus
ENSAPOG00000020465	sf3a1	99	84.783	ENSPPRG00000004391	SF3A1	100	83.396	Panthera_pardus
ENSAPOG00000020465	sf3a1	99	85.161	ENSPTIG00000000844	SF3A1	99	85.359	Panthera_tigris_altaica
ENSAPOG00000020465	sf3a1	99	85.032	ENSPTRG00000014240	SF3A1	100	83.145	Pan_troglodytes
ENSAPOG00000020465	sf3a1	99	84.783	ENSPANG00000020772	SF3A1	100	83.145	Papio_anubis
ENSAPOG00000020465	sf3a1	82	91.209	ENSPSIG00000012803	SF3A1	99	91.209	Pelodiscus_sinensis
ENSAPOG00000020465	sf3a1	97	90.980	ENSPMGG00000023096	sf3a1	100	91.634	Periophthalmus_magnuspinnatus
ENSAPOG00000020465	sf3a1	97	86.316	ENSPEMG00000009494	Sf3a1	100	83.396	Peromyscus_maniculatus_bairdii
ENSAPOG00000020465	sf3a1	69	78.467	ENSPMAG00000007139	-	100	73.719	Petromyzon_marinus
ENSAPOG00000020465	sf3a1	97	84.967	ENSPCIG00000022692	SF3A1	100	83.627	Phascolarctos_cinereus
ENSAPOG00000020465	sf3a1	100	84.733	ENSPFOG00000016768	sf3a1	100	84.733	Poecilia_formosa
ENSAPOG00000020465	sf3a1	100	95.553	ENSPLAG00000017268	sf3a1	100	95.553	Poecilia_latipinna
ENSAPOG00000020465	sf3a1	96	95.188	ENSPMEG00000019811	sf3a1	100	95.188	Poecilia_mexicana
ENSAPOG00000020465	sf3a1	100	95.299	ENSPREG00000010347	sf3a1	100	95.299	Poecilia_reticulata
ENSAPOG00000020465	sf3a1	99	84.783	ENSPPYG00000011707	SF3A1	100	83.145	Pongo_abelii
ENSAPOG00000020465	sf3a1	58	84.711	ENSPCAG00000003266	SF3A1	57	84.286	Procavia_capensis
ENSAPOG00000020465	sf3a1	99	84.655	ENSPCOG00000026630	SF3A1	100	82.516	Propithecus_coquereli
ENSAPOG00000020465	sf3a1	95	85.542	ENSPVAG00000017719	SF3A1	94	85.810	Pteropus_vampyrus
ENSAPOG00000020465	sf3a1	100	96.565	ENSPNYG00000018706	sf3a1	100	96.565	Pundamilia_nyererei
ENSAPOG00000020465	sf3a1	99	89.936	ENSPNAG00000003721	sf3a1	99	89.682	Pygocentrus_nattereri
ENSAPOG00000020465	sf3a1	99	85.032	ENSRNOG00000005218	Sf3a1	99	83.081	Rattus_norvegicus
ENSAPOG00000020465	sf3a1	99	84.783	ENSRBIG00000032167	SF3A1	100	83.145	Rhinopithecus_bieti
ENSAPOG00000020465	sf3a1	99	84.783	ENSRROG00000044908	SF3A1	100	83.145	Rhinopithecus_roxellana
ENSAPOG00000020465	sf3a1	94	86.122	ENSSBOG00000021960	SF3A1	98	86.377	Saimiri_boliviensis_boliviensis
ENSAPOG00000020465	sf3a1	100	80.076	ENSSHAG00000003666	SF3A1	97	82.484	Sarcophilus_harrisii
ENSAPOG00000020465	sf3a1	100	90.265	ENSSFOG00015004579	sf3a1	100	91.150	Scleropages_formosus
ENSAPOG00000020465	sf3a1	100	91.858	ENSSMAG00000004275	sf3a1	100	91.349	Scophthalmus_maximus
ENSAPOG00000020465	sf3a1	100	96.692	ENSSDUG00000022219	sf3a1	100	96.692	Seriola_dumerili
ENSAPOG00000020465	sf3a1	100	96.692	ENSSLDG00000012642	sf3a1	100	96.692	Seriola_lalandi_dorsalis
ENSAPOG00000020465	sf3a1	98	82.300	ENSSARG00000005960	SF3A1	100	82.558	Sorex_araneus
ENSAPOG00000020465	sf3a1	97	84.156	ENSSPUG00000018863	SF3A1	100	83.458	Sphenodon_punctatus
ENSAPOG00000020465	sf3a1	100	98.346	ENSSPAG00000011856	sf3a1	100	98.346	Stegastes_partitus
ENSAPOG00000020465	sf3a1	99	84.271	ENSSSCG00000010002	SF3A1	100	83.396	Sus_scrofa
ENSAPOG00000020465	sf3a1	96	84.868	ENSTGUG00000010547	SF3A1	99	85.492	Taeniopygia_guttata
ENSAPOG00000020465	sf3a1	100	90.204	ENSTRUG00000006118	sf3a1	100	90.076	Takifugu_rubripes
ENSAPOG00000020465	sf3a1	62	88.848	ENSTNIG00000005713	sf3a1	88	88.496	Tetraodon_nigroviridis
ENSAPOG00000020465	sf3a1	99	78.581	ENSTBEG00000012771	SF3A1	100	77.736	Tupaia_belangeri
ENSAPOG00000020465	sf3a1	99	84.419	ENSTTRG00000001535	SF3A1	100	83.920	Tursiops_truncatus
ENSAPOG00000020465	sf3a1	99	83.016	ENSUAMG00000006750	SF3A1	99	82.510	Ursus_americanus
ENSAPOG00000020465	sf3a1	99	85.419	ENSUMAG00000016665	SF3A1	100	83.461	Ursus_maritimus
ENSAPOG00000020465	sf3a1	99	84.910	ENSVVUG00000003075	SF3A1	100	83.522	Vulpes_vulpes
ENSAPOG00000020465	sf3a1	100	79.699	ENSXETG00000016144	sf3a1	96	85.081	Xenopus_tropicalis
ENSAPOG00000020465	sf3a1	100	94.663	ENSXCOG00000015653	sf3a1	100	94.663	Xiphophorus_couchianus
ENSAPOG00000020465	sf3a1	100	94.917	ENSXMAG00000002753	sf3a1	100	94.917	Xiphophorus_maculatus