EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000020565 (Gene tree)
Gene ID: 110955472
Gene Symbol: trub1
Alias: zgc:195155
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 12770 bases
Position: chrMVNR01000406.1:7294-20063
Accession: 110955472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000017379	TruB_N	PF01509.18	3.4e-47	1	1
ENSAPOP00000017386	TruB_N	PF01509.18	6.8e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000026718	-	4897	-	ENSAPOP00000017386	274 (aa)	-	-
ENSAPOT00000026625	-	4751	XM_022200480	ENSAPOP00000017379	275 (aa)	XP_022056172	UPI000B900431

Gene Model

Click here to download ENSAPOG00000020565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000020565's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000020565	trub1	53	30.405	ENSAPOG00000018284	-	54	30.405
ENSAPOG00000020565	trub1	71	31.500	ENSAPOG00000015733	trub2	72	31.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000020565	trub1	89	68.293	ENSG00000165832	TRUB1	70	68.571	Homo_sapiens
ENSAPOG00000020565	trub1	89	67.742	ENSAMEG00000014931	TRUB1	70	68.016	Ailuropoda_melanoleuca
ENSAPOG00000020565	trub1	96	83.774	ENSACIG00000003060	trub1	88	83.588	Amphilophus_citrinellus
ENSAPOG00000020565	trub1	100	98.182	ENSAOCG00000017188	trub1	100	98.182	Amphiprion_ocellaris
ENSAPOG00000020565	trub1	100	97.818	ENSAPEG00000015209	trub1	100	97.818	Amphiprion_percula
ENSAPOG00000020565	trub1	92	87.352	ENSATEG00000023291	trub1	86	90.041	Anabas_testudineus
ENSAPOG00000020565	trub1	91	67.857	ENSAPLG00000006808	TRUB1	87	68.852	Anas_platyrhynchos
ENSAPOG00000020565	trub1	89	67.755	ENSACAG00000009282	TRUB1	88	68.033	Anolis_carolinensis
ENSAPOG00000020565	trub1	89	68.293	ENSANAG00000022870	TRUB1	70	68.571	Aotus_nancymaae
ENSAPOG00000020565	trub1	99	88.235	ENSACLG00000000823	trub1	94	89.695	Astatotilapia_calliptera
ENSAPOG00000020565	trub1	94	77.132	ENSAMXG00000015845	trub1	82	78.279	Astyanax_mexicanus
ENSAPOG00000020565	trub1	89	69.512	ENSBTAG00000012955	TRUB1	70	69.796	Bos_taurus
ENSAPOG00000020565	trub1	89	68.293	ENSCJAG00000047815	TRUB1	70	68.571	Callithrix_jacchus
ENSAPOG00000020565	trub1	89	68.699	ENSCAFG00000011688	TRUB1	70	68.980	Canis_familiaris
ENSAPOG00000020565	trub1	89	68.699	ENSCAFG00020013237	TRUB1	70	68.980	Canis_lupus_dingo
ENSAPOG00000020565	trub1	89	68.699	ENSCHIG00000020884	TRUB1	73	68.980	Capra_hircus
ENSAPOG00000020565	trub1	89	68.293	ENSTSYG00000000446	TRUB1	70	68.571	Carlito_syrichta
ENSAPOG00000020565	trub1	77	61.792	ENSCAPG00000017088	TRUB1	82	61.792	Cavia_aperea
ENSAPOG00000020565	trub1	67	66.120	ENSCPOG00000040236	-	75	66.484	Cavia_porcellus
ENSAPOG00000020565	trub1	71	62.887	ENSCPOG00000030129	-	75	63.212	Cavia_porcellus
ENSAPOG00000020565	trub1	89	68.293	ENSCCAG00000028842	TRUB1	70	68.571	Cebus_capucinus
ENSAPOG00000020565	trub1	89	68.293	ENSCATG00000033431	TRUB1	70	68.571	Cercocebus_atys
ENSAPOG00000020565	trub1	67	65.027	ENSCLAG00000008664	TRUB1	75	65.385	Chinchilla_lanigera
ENSAPOG00000020565	trub1	89	68.293	ENSCSAG00000004891	TRUB1	70	68.571	Chlorocebus_sabaeus
ENSAPOG00000020565	trub1	88	60.905	ENSCHOG00000011931	TRUB1	70	61.157	Choloepus_hoffmanni
ENSAPOG00000020565	trub1	89	71.429	ENSCPBG00000003051	TRUB1	84	71.721	Chrysemys_picta_bellii
ENSAPOG00000020565	trub1	89	68.293	ENSCANG00000029445	TRUB1	70	68.571	Colobus_angolensis_palliatus
ENSAPOG00000020565	trub1	89	59.836	ENSCGRG00001010322	-	66	60.000	Cricetulus_griseus_chok1gshd
ENSAPOG00000020565	trub1	79	68.349	ENSCGRG00001016772	-	71	69.302	Cricetulus_griseus_chok1gshd
ENSAPOG00000020565	trub1	89	68.033	ENSCGRG00000010806	Trub1	75	68.163	Cricetulus_griseus_crigri
ENSAPOG00000020565	trub1	95	77.395	ENSCSEG00000011261	trub1	79	79.918	Cynoglossus_semilaevis
ENSAPOG00000020565	trub1	92	82.283	ENSCVAG00000008791	trub1	75	83.265	Cyprinodon_variegatus
ENSAPOG00000020565	trub1	99	71.533	ENSDARG00000053805	trub1	99	85.294	Danio_rerio
ENSAPOG00000020565	trub1	89	66.667	ENSDNOG00000001069	TRUB1	70	66.939	Dasypus_novemcinctus
ENSAPOG00000020565	trub1	87	68.201	ENSDORG00000010431	Trub1	71	67.347	Dipodomys_ordii
ENSAPOG00000020565	trub1	67	64.539	ENSETEG00000009183	TRUB1	50	66.176	Echinops_telfairi
ENSAPOG00000020565	trub1	89	68.293	ENSEASG00005014739	TRUB1	70	68.571	Equus_asinus_asinus
ENSAPOG00000020565	trub1	89	68.293	ENSECAG00000007177	TRUB1	70	68.571	Equus_caballus
ENSAPOG00000020565	trub1	89	60.163	ENSEEUG00000013993	TRUB1	68	60.408	Erinaceus_europaeus
ENSAPOG00000020565	trub1	96	80.000	ENSELUG00000000502	trub1	85	83.197	Esox_lucius
ENSAPOG00000020565	trub1	89	68.699	ENSFCAG00000031927	TRUB1	70	68.980	Felis_catus
ENSAPOG00000020565	trub1	80	69.058	ENSFALG00000002232	TRUB1	83	69.907	Ficedula_albicollis
ENSAPOG00000020565	trub1	67	66.120	ENSFDAG00000008140	TRUB1	75	66.484	Fukomys_damarensis
ENSAPOG00000020565	trub1	99	80.220	ENSFHEG00000004016	trub1	90	82.443	Fundulus_heteroclitus
ENSAPOG00000020565	trub1	90	67.206	ENSGALG00000009091	TRUB1	86	67.623	Gallus_gallus
ENSAPOG00000020565	trub1	93	82.422	ENSGAFG00000009193	trub1	89	80.469	Gambusia_affinis
ENSAPOG00000020565	trub1	76	87.019	ENSGACG00000015387	trub1	96	89.744	Gasterosteus_aculeatus
ENSAPOG00000020565	trub1	89	71.429	ENSGAGG00000009758	TRUB1	70	71.721	Gopherus_agassizii
ENSAPOG00000020565	trub1	89	68.293	ENSGGOG00000004583	TRUB1	70	68.571	Gorilla_gorilla
ENSAPOG00000020565	trub1	99	88.971	ENSHBUG00000016787	trub1	94	90.458	Haplochromis_burtoni
ENSAPOG00000020565	trub1	91	65.339	ENSHGLG00000015314	TRUB1	70	66.531	Heterocephalus_glaber_female
ENSAPOG00000020565	trub1	67	65.574	ENSHGLG00100009183	TRUB1	77	65.934	Heterocephalus_glaber_male
ENSAPOG00000020565	trub1	98	84.015	ENSHCOG00000017877	trub1	88	87.705	Hippocampus_comes
ENSAPOG00000020565	trub1	91	77.108	ENSIPUG00000017559	trub1	86	77.551	Ictalurus_punctatus
ENSAPOG00000020565	trub1	89	67.886	ENSSTOG00000003641	TRUB1	73	68.163	Ictidomys_tridecemlineatus
ENSAPOG00000020565	trub1	89	67.073	ENSJJAG00000011800	Trub1	72	67.347	Jaculus_jaculus
ENSAPOG00000020565	trub1	99	84.191	ENSKMAG00000006232	trub1	94	85.878	Kryptolebias_marmoratus
ENSAPOG00000020565	trub1	96	87.547	ENSLBEG00000026722	trub1	92	87.786	Labrus_bergylta
ENSAPOG00000020565	trub1	94	70.270	ENSLACG00000014885	TRUB1	81	73.140	Latimeria_chalumnae
ENSAPOG00000020565	trub1	95	74.809	ENSLOCG00000012979	trub1	83	77.959	Lepisosteus_oculatus
ENSAPOG00000020565	trub1	93	66.667	ENSLAFG00000015452	TRUB1	70	68.163	Loxodonta_africana
ENSAPOG00000020565	trub1	89	68.293	ENSMFAG00000031767	TRUB1	70	68.571	Macaca_fascicularis
ENSAPOG00000020565	trub1	89	68.293	ENSMMUG00000001902	TRUB1	70	68.571	Macaca_mulatta
ENSAPOG00000020565	trub1	89	63.008	ENSMNEG00000044646	TRUB1	69	63.673	Macaca_nemestrina
ENSAPOG00000020565	trub1	89	68.293	ENSMLEG00000042655	TRUB1	70	68.571	Mandrillus_leucophaeus
ENSAPOG00000020565	trub1	99	87.868	ENSMZEG00005024095	trub1	94	89.313	Maylandia_zebra
ENSAPOG00000020565	trub1	90	67.611	ENSMGAG00000011135	TRUB1	84	68.033	Meleagris_gallopavo
ENSAPOG00000020565	trub1	89	65.984	ENSMAUG00000011101	Trub1	72	66.122	Mesocricetus_auratus
ENSAPOG00000020565	trub1	89	67.886	ENSMICG00000016324	TRUB1	70	68.163	Microcebus_murinus
ENSAPOG00000020565	trub1	89	68.443	ENSMOCG00000017759	Trub1	74	68.443	Microtus_ochrogaster
ENSAPOG00000020565	trub1	89	69.672	ENSMODG00000009676	TRUB1	67	69.672	Monodelphis_domestica
ENSAPOG00000020565	trub1	90	68.421	MGP_CAROLIEiJ_G0023100	Trub1	74	69.399	Mus_caroli
ENSAPOG00000020565	trub1	90	67.611	ENSMUSG00000025086	Trub1	74	68.306	Mus_musculus
ENSAPOG00000020565	trub1	91	66.932	MGP_PahariEiJ_G0014588	Trub1	72	67.755	Mus_pahari
ENSAPOG00000020565	trub1	90	67.611	MGP_SPRETEiJ_G0024021	Trub1	74	68.306	Mus_spretus
ENSAPOG00000020565	trub1	89	68.699	ENSMPUG00000003556	TRUB1	70	68.980	Mustela_putorius_furo
ENSAPOG00000020565	trub1	89	67.480	ENSMLUG00000017686	TRUB1	72	67.755	Myotis_lucifugus
ENSAPOG00000020565	trub1	91	66.534	ENSNGAG00000018682	Trub1	70	67.755	Nannospalax_galili
ENSAPOG00000020565	trub1	92	92.490	ENSNBRG00000023393	trub1	88	92.653	Neolamprologus_brichardi
ENSAPOG00000020565	trub1	89	68.293	ENSNLEG00000016345	TRUB1	70	68.571	Nomascus_leucogenys
ENSAPOG00000020565	trub1	73	70.149	ENSMEUG00000006603	TRUB1	74	70.149	Notamacropus_eugenii
ENSAPOG00000020565	trub1	93	64.259	ENSOPRG00000009371	TRUB1	71	67.347	Ochotona_princeps
ENSAPOG00000020565	trub1	89	66.260	ENSODEG00000010854	TRUB1	70	66.531	Octodon_degus
ENSAPOG00000020565	trub1	98	88.476	ENSONIG00000007249	trub1	95	89.313	Oreochromis_niloticus
ENSAPOG00000020565	trub1	90	68.421	ENSOANG00000001556	TRUB1	80	69.421	Ornithorhynchus_anatinus
ENSAPOG00000020565	trub1	89	67.480	ENSOCUG00000009456	TRUB1	71	67.755	Oryctolagus_cuniculus
ENSAPOG00000020565	trub1	99	82.482	ENSORLG00000029719	trub1	93	86.100	Oryzias_latipes
ENSAPOG00000020565	trub1	99	82.117	ENSORLG00020016767	trub1	92	86.100	Oryzias_latipes_hni
ENSAPOG00000020565	trub1	99	82.482	ENSORLG00015014728	trub1	93	86.100	Oryzias_latipes_hsok
ENSAPOG00000020565	trub1	99	80.435	ENSOMEG00000014556	trub1	91	84.556	Oryzias_melastigma
ENSAPOG00000020565	trub1	89	68.293	ENSOGAG00000015895	TRUB1	70	68.571	Otolemur_garnettii
ENSAPOG00000020565	trub1	89	67.194	ENSOARG00000015591	TRUB1	72	67.460	Ovis_aries
ENSAPOG00000020565	trub1	89	68.293	ENSPPAG00000043645	TRUB1	70	68.571	Pan_paniscus
ENSAPOG00000020565	trub1	89	68.699	ENSPPRG00000007096	TRUB1	70	68.980	Panthera_pardus
ENSAPOG00000020565	trub1	89	68.699	ENSPTIG00000006378	TRUB1	70	68.980	Panthera_tigris_altaica
ENSAPOG00000020565	trub1	89	68.293	ENSPTRG00000002964	TRUB1	70	68.571	Pan_troglodytes
ENSAPOG00000020565	trub1	89	68.293	ENSPANG00000020712	TRUB1	70	68.571	Papio_anubis
ENSAPOG00000020565	trub1	61	80.952	ENSPKIG00000003852	trub1	72	80.952	Paramormyrops_kingsleyae
ENSAPOG00000020565	trub1	91	70.400	ENSPSIG00000012877	TRUB1	83	71.488	Pelodiscus_sinensis
ENSAPOG00000020565	trub1	95	80.843	ENSPMGG00000000075	trub1	88	82.377	Periophthalmus_magnuspinnatus
ENSAPOG00000020565	trub1	91	67.331	ENSPEMG00000011156	Trub1	72	68.571	Peromyscus_maniculatus_bairdii
ENSAPOG00000020565	trub1	89	69.672	ENSPCIG00000009729	TRUB1	66	69.672	Phascolarctos_cinereus
ENSAPOG00000020565	trub1	98	80.297	ENSPFOG00000009950	trub1	89	85.246	Poecilia_formosa
ENSAPOG00000020565	trub1	99	80.220	ENSPLAG00000013855	trub1	86	84.836	Poecilia_latipinna
ENSAPOG00000020565	trub1	99	80.586	ENSPMEG00000009064	trub1	88	85.246	Poecilia_mexicana
ENSAPOG00000020565	trub1	99	80.220	ENSPREG00000003343	trub1	94	82.375	Poecilia_reticulata
ENSAPOG00000020565	trub1	89	67.886	ENSPPYG00000002676	TRUB1	70	68.163	Pongo_abelii
ENSAPOG00000020565	trub1	93	60.784	ENSPCAG00000008427	TRUB1	70	62.041	Procavia_capensis
ENSAPOG00000020565	trub1	89	62.602	ENSPCOG00000024360	TRUB1	68	62.041	Propithecus_coquereli
ENSAPOG00000020565	trub1	73	68.812	ENSPVAG00000007575	TRUB1	76	69.154	Pteropus_vampyrus
ENSAPOG00000020565	trub1	99	88.603	ENSPNYG00000018614	trub1	94	90.076	Pundamilia_nyererei
ENSAPOG00000020565	trub1	92	67.323	ENSPNAG00000006881	trub1	78	67.623	Pygocentrus_nattereri
ENSAPOG00000020565	trub1	91	66.135	ENSRNOG00000017321	Trub1	72	66.939	Rattus_norvegicus
ENSAPOG00000020565	trub1	89	60.569	ENSRBIG00000033423	TRUB1	68	59.919	Rhinopithecus_bieti
ENSAPOG00000020565	trub1	89	68.293	ENSRROG00000033902	TRUB1	70	68.571	Rhinopithecus_roxellana
ENSAPOG00000020565	trub1	89	68.293	ENSSBOG00000024237	TRUB1	70	68.571	Saimiri_boliviensis_boliviensis
ENSAPOG00000020565	trub1	77	70.233	ENSSHAG00000009346	TRUB1	72	70.233	Sarcophilus_harrisii
ENSAPOG00000020565	trub1	98	74.182	ENSSFOG00015022124	trub1	83	79.424	Scleropages_formosus
ENSAPOG00000020565	trub1	100	85.818	ENSSMAG00000001020	trub1	93	88.550	Scophthalmus_maximus
ENSAPOG00000020565	trub1	96	87.547	ENSSDUG00000016414	trub1	94	87.786	Seriola_dumerili
ENSAPOG00000020565	trub1	100	84.892	ENSSLDG00000015486	trub1	94	88.168	Seriola_lalandi_dorsalis
ENSAPOG00000020565	trub1	95	68.061	ENSSPUG00000001642	TRUB1	84	70.902	Sphenodon_punctatus
ENSAPOG00000020565	trub1	100	93.165	ENSSPAG00000001217	trub1	94	95.802	Stegastes_partitus
ENSAPOG00000020565	trub1	91	67.331	ENSSSCG00000010653	TRUB1	71	68.163	Sus_scrofa
ENSAPOG00000020565	trub1	91	68.651	ENSTGUG00000010971	TRUB1	87	69.388	Taeniopygia_guttata
ENSAPOG00000020565	trub1	81	58.559	ENSTBEG00000002880	TRUB1	83	59.434	Tupaia_belangeri
ENSAPOG00000020565	trub1	73	68.317	ENSTTRG00000005767	TRUB1	77	68.657	Tursiops_truncatus
ENSAPOG00000020565	trub1	89	68.699	ENSUAMG00000024876	TRUB1	70	68.980	Ursus_americanus
ENSAPOG00000020565	trub1	89	68.699	ENSUMAG00000002411	TRUB1	73	68.980	Ursus_maritimus
ENSAPOG00000020565	trub1	89	68.699	ENSVPAG00000005507	TRUB1	70	68.980	Vicugna_pacos
ENSAPOG00000020565	trub1	89	68.699	ENSVVUG00000010085	TRUB1	59	68.980	Vulpes_vulpes
ENSAPOG00000020565	trub1	89	69.388	ENSXETG00000023828	trub1	87	69.835	Xenopus_tropicalis
ENSAPOG00000020565	trub1	88	85.537	ENSXCOG00000017847	trub1	84	85.294	Xiphophorus_couchianus
ENSAPOG00000020565	trub1	99	80.586	ENSXMAG00000014701	trub1	88	85.246	Xiphophorus_maculatus