EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPOG00000020779 (Gene tree)
Gene ID
110966072
Gene Symbol
LSM5 (1 of many)
Alias
YER146W
Full Name
U6 snRNA-associated Sm-like protein LSm5
Gene Type
protein_coding
Species
Acanthochromis_polyacanthus
Status
putative
Strand
Plus strand
Length
3805 bases
Position
chrMVNR01001536.1:124150-127954
Accession
110966072
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPOP00000032693LSMPF01423.223.9e-2011
ENSAPOP00000032694LSMPF01423.223.9e-2011
ENSAPOP00000017508LSMPF01423.224.8e-2011
ENSAPOP00000032675LSMPF01423.224.8e-2011
ENSAPOP00000017557LSMPF01423.228.4e-2011
ENSAPOP00000032681LSMPF01423.228.4e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPOT00000034070LSM5 (1 of many)-206276XM_022215317ENSAPOP0000001750891 (aa)XP_022071009UPI000B900B8D
ENSAPOT00000026874LSM5 (1 of many)-205881-ENSAPOP0000003269485 (aa)--
ENSAPOT00000026873LSM5 (1 of many)-204881-ENSAPOP0000003269385 (aa)--
ENSAPOT00000026840LSM5 (1 of many)-201902XM_022215316ENSAPOP0000003267591 (aa)XP_022071008UPI000B900B8D
ENSAPOT00000026867LSM5 (1 of many)-203978-ENSAPOP0000001755789 (aa)--
ENSAPOT00000026842LSM5 (1 of many)-202978-ENSAPOP0000003268189 (aa)--
Gene Model
Click here to download ENSAPOG00000020779's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000020779's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPOG00000020779LSM58630.488ENSAPOG00000024096snrpe8730.488
ENSAPOG00000020779LSM5100100.000ENSAPOG00000011743LSM5100100.000
ENSAPOG00000020779LSM58234.667ENSAPOG00000018947lsm37434.667
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPOG00000020779LSM510095.604ENSG00000106355LSM510096.774Homo_sapiens
ENSAPOG00000020779LSM510095.604ENSAMEG00000006700LSM510095.604Ailuropoda_melanoleuca
ENSAPOG00000020779LSM59659.770ENSACIG00000019185lsm59859.770Amphilophus_citrinellus
ENSAPOG00000020779LSM5100100.000ENSAOCG00000001636lsm5100100.000Amphiprion_ocellaris
ENSAPOG00000020779LSM568100.000ENSAPEG00000008201lsm5100100.000Amphiprion_percula
ENSAPOG00000020779LSM5100100.000ENSAPEG00000008151lsm5100100.000Amphiprion_percula
ENSAPOG00000020779LSM59696.341ENSATEG00000020470lsm510061.538Anabas_testudineus
ENSAPOG00000020779LSM58297.143ENSAPLG00000008171LSM510097.297Anas_platyrhynchos
ENSAPOG00000020779LSM56694.643ENSACAG00000009530LSM59394.643Anolis_carolinensis
ENSAPOG00000020779LSM510094.505ENSANAG00000034409-10094.505Aotus_nancymaae
ENSAPOG00000020779LSM510074.725ENSANAG00000037758-10074.725Aotus_nancymaae
ENSAPOG00000020779LSM59991.111ENSANAG00000024192-9491.111Aotus_nancymaae
ENSAPOG00000020779LSM59697.701ENSACLG00000012891lsm59997.701Astatotilapia_calliptera
ENSAPOG00000020779LSM510082.979ENSAMXG00000035543lsm510082.979Astyanax_mexicanus
ENSAPOG00000020779LSM55677.083ENSBTAG00000052014-6377.083Bos_taurus
ENSAPOG00000020779LSM510095.604ENSBTAG00000002332LSM510095.604Bos_taurus
ENSAPOG00000020779LSM510072.527WBGene00003079lsm-510072.527Caenorhabditis_elegans
ENSAPOG00000020779LSM510095.604ENSCJAG00000047379LSM58186.538Callithrix_jacchus
ENSAPOG00000020779LSM59983.333ENSCJAG00000005678-10083.333Callithrix_jacchus
ENSAPOG00000020779LSM510094.505ENSCAFG00000019261-10094.505Canis_familiaris
ENSAPOG00000020779LSM55988.000ENSCAFG00000030781-5888.000Canis_familiaris
ENSAPOG00000020779LSM510095.604ENSCAFG00020004946LSM510095.604Canis_lupus_dingo
ENSAPOG00000020779LSM510095.604ENSCHIG00000024539LSM510095.604Capra_hircus
ENSAPOG00000020779LSM510093.407ENSCHIG00000004079-10093.407Capra_hircus
ENSAPOG00000020779LSM58774.324ENSCHIG00000021428-9571.591Capra_hircus
ENSAPOG00000020779LSM510070.330ENSTSYG00000036637-10070.330Carlito_syrichta
ENSAPOG00000020779LSM510095.604ENSTSYG00000006449-10095.604Carlito_syrichta
ENSAPOG00000020779LSM510083.516ENSTSYG00000028728-10083.516Carlito_syrichta
ENSAPOG00000020779LSM510078.022ENSTSYG00000026530-9178.022Carlito_syrichta
ENSAPOG00000020779LSM57698.462ENSCAPG00000006980LSM510090.667Cavia_aperea
ENSAPOG00000020779LSM510095.604ENSCPOG00000036386LSM510095.604Cavia_porcellus
ENSAPOG00000020779LSM510094.505ENSCCAG00000000821-10094.505Cebus_capucinus
ENSAPOG00000020779LSM510093.407ENSCCAG00000032123-10093.407Cebus_capucinus
ENSAPOG00000020779LSM510095.604ENSCCAG00000037808-10095.604Cebus_capucinus
ENSAPOG00000020779LSM510076.923ENSCCAG00000032792-10076.923Cebus_capucinus
ENSAPOG00000020779LSM510064.835ENSCCAG00000037334-10064.835Cebus_capucinus
ENSAPOG00000020779LSM510095.604ENSCATG00000040218LSM510096.774Cercocebus_atys
ENSAPOG00000020779LSM59984.524ENSCATG00000014790-9592.727Cercocebus_atys
ENSAPOG00000020779LSM510095.604ENSCLAG00000000202LSM510095.604Chinchilla_lanigera
ENSAPOG00000020779LSM510081.319ENSCLAG00000005062-9081.319Chinchilla_lanigera
ENSAPOG00000020779LSM58896.000ENSCHOG00000005335LSM59996.000Choloepus_hoffmanni
ENSAPOG00000020779LSM510095.604ENSCPBG00000013685LSM510095.604Chrysemys_picta_bellii
ENSAPOG00000020779LSM59784.091ENSCING00000020625-9984.091Ciona_intestinalis
ENSAPOG00000020779LSM59586.047ENSCSAVG00000001439-9886.047Ciona_savignyi
ENSAPOG00000020779LSM510095.604ENSCANG00000039909LSM510096.774Colobus_angolensis_palliatus
ENSAPOG00000020779LSM510095.604ENSCGRG00001015461Lsm510095.604Cricetulus_griseus_chok1gshd
ENSAPOG00000020779LSM58297.333ENSCGRG00000007677Lsm510097.333Cricetulus_griseus_crigri
ENSAPOG00000020779LSM510062.637ENSCSEG00000015286lsm510062.637Cynoglossus_semilaevis
ENSAPOG00000020779LSM510097.802ENSCVAG00000004262lsm510097.802Cyprinodon_variegatus
ENSAPOG00000020779LSM510095.604ENSDARG00000071573lsm510098.387Danio_rerio
ENSAPOG00000020779LSM510095.604ENSDNOG00000034958LSM510095.604Dasypus_novemcinctus
ENSAPOG00000020779LSM510084.706ENSDNOG00000049495-9685.057Dasypus_novemcinctus
ENSAPOG00000020779LSM510095.604ENSDORG00000009422Lsm510095.604Dipodomys_ordii
ENSAPOG00000020779LSM59979.762FBgn0035675CG66109878.652Drosophila_melanogaster
ENSAPOG00000020779LSM510064.706ENSETEG00000000777-9964.045Echinops_telfairi
ENSAPOG00000020779LSM59875.281ENSETEG00000010651-9975.281Echinops_telfairi
ENSAPOG00000020779LSM58178.378ENSETEG00000016074-9878.378Echinops_telfairi
ENSAPOG00000020779LSM510095.604ENSETEG00000018068LSM510095.604Echinops_telfairi
ENSAPOG00000020779LSM59972.222ENSETEG00000001469-9972.222Echinops_telfairi
ENSAPOG00000020779LSM510094.118ENSEBUG00000008540lsm510093.407Eptatretus_burgeri
ENSAPOG00000020779LSM510095.604ENSEASG00005003500LSM510095.604Equus_asinus_asinus
ENSAPOG00000020779LSM510081.319ENSECAG00000018445LSM510081.319Equus_caballus
ENSAPOG00000020779LSM56392.982ENSEEUG00000004102LSM59592.982Erinaceus_europaeus
ENSAPOG00000020779LSM510096.703ENSELUG00000007792lsm510096.703Esox_lucius
ENSAPOG00000020779LSM510095.604ENSFCAG00000000230LSM510095.604Felis_catus
ENSAPOG00000020779LSM58497.368ENSFALG00000001892LSM59297.368Ficedula_albicollis
ENSAPOG00000020779LSM59067.073ENSFDAG00000008685-9767.073Fukomys_damarensis
ENSAPOG00000020779LSM510095.604ENSFDAG00000008767LSM510095.604Fukomys_damarensis
ENSAPOG00000020779LSM59877.528ENSFHEG00000004011lsm59677.528Fundulus_heteroclitus
ENSAPOG00000020779LSM510097.647ENSGMOG00000018235lsm510097.778Gadus_morhua
ENSAPOG00000020779LSM510094.505ENSGALG00000041625LSM510094.505Gallus_gallus
ENSAPOG00000020779LSM568100.000ENSGAFG00000016824lsm5100100.000Gambusia_affinis
ENSAPOG00000020779LSM510098.901ENSGACG00000005528lsm510098.901Gasterosteus_aculeatus
ENSAPOG00000020779LSM510095.604ENSGAGG00000015593LSM510095.604Gopherus_agassizii
ENSAPOG00000020779LSM510095.604ENSGGOG00000043469LSM510095.604Gorilla_gorilla
ENSAPOG00000020779LSM59697.701ENSHBUG00000013773lsm59997.701Haplochromis_burtoni
ENSAPOG00000020779LSM510095.604ENSHGLG00000011765LSM510095.604Heterocephalus_glaber_female
ENSAPOG00000020779LSM510092.308ENSHGLG00100015610LSM510092.308Heterocephalus_glaber_male
ENSAPOG00000020779LSM510060.440ENSHCOG00000008288lsm510060.440Hippocampus_comes
ENSAPOG00000020779LSM510095.604ENSIPUG00000021095LSM510095.604Ictalurus_punctatus
ENSAPOG00000020779LSM510095.604ENSSTOG00000012662LSM510095.604Ictidomys_tridecemlineatus
ENSAPOG00000020779LSM59280.233ENSSTOG00000033886-9780.233Ictidomys_tridecemlineatus
ENSAPOG00000020779LSM510069.412ENSJJAG00000016144-9267.033Jaculus_jaculus
ENSAPOG00000020779LSM59388.608ENSJJAG00000004475-10088.608Jaculus_jaculus
ENSAPOG00000020779LSM510093.407ENSJJAG00000012145-10093.407Jaculus_jaculus
ENSAPOG00000020779LSM510098.901ENSKMAG00000021861lsm510098.901Kryptolebias_marmoratus
ENSAPOG00000020779LSM59696.341ENSLBEG00000009235LSM56597.561Labrus_bergylta
ENSAPOG00000020779LSM56683.929ENSLBEG00000017379lsm59283.929Labrus_bergylta
ENSAPOG00000020779LSM510095.294ENSLACG00000022448LSM510094.505Latimeria_chalumnae
ENSAPOG00000020779LSM510095.604ENSLOCG00000012903lsm510095.604Lepisosteus_oculatus
ENSAPOG00000020779LSM510069.231ENSLAFG00000027938-10069.231Loxodonta_africana
ENSAPOG00000020779LSM510095.604ENSLAFG00000029579LSM510095.604Loxodonta_africana
ENSAPOG00000020779LSM55691.667ENSMFAG00000031187-8191.667Macaca_fascicularis
ENSAPOG00000020779LSM510093.407ENSMFAG00000030152-10093.407Macaca_fascicularis
ENSAPOG00000020779LSM510095.604ENSMFAG00000038508LSM510095.604Macaca_fascicularis
ENSAPOG00000020779LSM510093.407ENSMMUG00000030131-10093.407Macaca_mulatta
ENSAPOG00000020779LSM56186.538ENSMMUG00000045129-8186.538Macaca_mulatta
ENSAPOG00000020779LSM59985.556ENSMMUG00000039822-10085.556Macaca_mulatta
ENSAPOG00000020779LSM510093.407ENSMNEG00000037935-10093.407Macaca_nemestrina
ENSAPOG00000020779LSM510095.604ENSMNEG00000015331LSM510096.774Macaca_nemestrina
ENSAPOG00000020779LSM59884.270ENSMLEG00000034037-10084.270Mandrillus_leucophaeus
ENSAPOG00000020779LSM510095.604ENSMLEG00000024945LSM510095.604Mandrillus_leucophaeus
ENSAPOG00000020779LSM510093.407ENSMAMG00000012869lsm510093.407Mastacembelus_armatus
ENSAPOG00000020779LSM59697.701ENSMZEG00005019554lsm59997.701Maylandia_zebra
ENSAPOG00000020779LSM510094.505ENSMGAG00000012117LSM510094.505Meleagris_gallopavo
ENSAPOG00000020779LSM510094.505ENSMAUG00000008132-10094.505Mesocricetus_auratus
ENSAPOG00000020779LSM510095.604ENSMAUG00000012222Lsm510095.604Mesocricetus_auratus
ENSAPOG00000020779LSM510095.604ENSMICG00000005353LSM510095.604Microcebus_murinus
ENSAPOG00000020779LSM59974.444ENSMICG00000033928-9674.444Microcebus_murinus
ENSAPOG00000020779LSM510095.604ENSMOCG00000012018Lsm510095.604Microtus_ochrogaster
ENSAPOG00000020779LSM584100.000ENSMMOG00000004026lsm587100.000Mola_mola
ENSAPOG00000020779LSM56896.774ENSMODG00000013274-10096.774Monodelphis_domestica
ENSAPOG00000020779LSM56893.548ENSMALG00000010343lsm510093.548Monopterus_albus
ENSAPOG00000020779LSM510095.604MGP_CAROLIEiJ_G0028421Lsm510095.604Mus_caroli
ENSAPOG00000020779LSM510095.604ENSMUSG00000091625Lsm510095.604Mus_musculus
ENSAPOG00000020779LSM510095.604MGP_PahariEiJ_G0022171Lsm510095.604Mus_pahari
ENSAPOG00000020779LSM510095.604MGP_SPRETEiJ_G0029423Lsm510095.604Mus_spretus
ENSAPOG00000020779LSM510095.604ENSMLUG00000017028LSM510095.604Myotis_lucifugus
ENSAPOG00000020779LSM59975.556ENSNGAG00000022569-9675.556Nannospalax_galili
ENSAPOG00000020779LSM510083.871ENSNGAG00000017707-10083.871Nannospalax_galili
ENSAPOG00000020779LSM510095.604ENSNGAG00000024142Lsm510095.604Nannospalax_galili
ENSAPOG00000020779LSM55391.111ENSNBRG00000009964LSM59691.111Neolamprologus_brichardi
ENSAPOG00000020779LSM56398.246ENSNBRG00000011386lsm57698.246Neolamprologus_brichardi
ENSAPOG00000020779LSM510095.604ENSNLEG00000015268LSM510095.604Nomascus_leucogenys
ENSAPOG00000020779LSM58297.333ENSOPRG00000002443LSM510097.333Ochotona_princeps
ENSAPOG00000020779LSM510095.604ENSODEG00000019072-10095.604Octodon_degus
ENSAPOG00000020779LSM510095.604ENSODEG00000008258-10095.604Octodon_degus
ENSAPOG00000020779LSM58660.274ENSOANG00000014540-10060.000Ornithorhynchus_anatinus
ENSAPOG00000020779LSM510095.604ENSOCUG00000029043LSM510095.604Oryctolagus_cuniculus
ENSAPOG00000020779LSM510098.824ENSORLG00000027725lsm55897.802Oryzias_latipes
ENSAPOG00000020779LSM510095.294ENSORLG00020003019lsm58694.253Oryzias_latipes_hni
ENSAPOG00000020779LSM510098.824ENSORLG00015003338lsm510097.802Oryzias_latipes_hsok
ENSAPOG00000020779LSM510097.647ENSOMEG00000001078lsm510096.703Oryzias_melastigma
ENSAPOG00000020779LSM510095.604ENSOGAG00000013892LSM510095.604Otolemur_garnettii
ENSAPOG00000020779LSM510095.604ENSOARG00000006944LSM510095.604Ovis_aries
ENSAPOG00000020779LSM510095.604ENSPPAG00000003697-10095.604Pan_paniscus
ENSAPOG00000020779LSM510095.604ENSPPRG00000002550LSM510095.604Panthera_pardus
ENSAPOG00000020779LSM510095.604ENSPTIG00000015604LSM510095.604Panthera_tigris_altaica
ENSAPOG00000020779LSM510095.604ENSPTRG00000019057LSM510095.604Pan_troglodytes
ENSAPOG00000020779LSM510079.121ENSPTRG00000049488-10081.319Pan_troglodytes
ENSAPOG00000020779LSM59985.556ENSPANG00000032538-10085.556Papio_anubis
ENSAPOG00000020779LSM510092.308ENSPANG00000033477-10092.308Papio_anubis
ENSAPOG00000020779LSM510095.604ENSPANG00000032179-10095.604Papio_anubis
ENSAPOG00000020779LSM510097.802ENSPKIG00000011910lsm510097.802Paramormyrops_kingsleyae
ENSAPOG00000020779LSM58297.143ENSPSIG00000014796LSM510097.297Pelodiscus_sinensis
ENSAPOG00000020779LSM568100.000ENSPMGG00000011699lsm5100100.000Periophthalmus_magnuspinnatus
ENSAPOG00000020779LSM55593.617ENSPEMG00000019994-8093.617Peromyscus_maniculatus_bairdii
ENSAPOG00000020779LSM510068.132ENSPEMG00000022375-10068.132Peromyscus_maniculatus_bairdii
ENSAPOG00000020779LSM510097.802ENSPFOG00000001433lsm510097.802Poecilia_formosa
ENSAPOG00000020779LSM510097.802ENSPLAG00000009665lsm510097.802Poecilia_latipinna
ENSAPOG00000020779LSM510097.802ENSPMEG00000022265lsm510097.802Poecilia_mexicana
ENSAPOG00000020779LSM568100.000ENSPREG00000022452lsm5100100.000Poecilia_reticulata
ENSAPOG00000020779LSM510092.308ENSPPYG00000017661LSM510092.308Pongo_abelii
ENSAPOG00000020779LSM59596.296ENSPCAG00000013740LSM510096.296Procavia_capensis
ENSAPOG00000020779LSM510095.604ENSPVAG00000009786LSM510095.604Pteropus_vampyrus
ENSAPOG00000020779LSM59697.701ENSPNYG00000022236lsm59997.701Pundamilia_nyererei
ENSAPOG00000020779LSM510095.604ENSPNAG00000001887lsm510095.604Pygocentrus_nattereri
ENSAPOG00000020779LSM510092.391ENSRNOG00000027305AABR07065089.110092.391Rattus_norvegicus
ENSAPOG00000020779LSM510095.604ENSRNOG00000042126Lsm510095.604Rattus_norvegicus
ENSAPOG00000020779LSM510095.604ENSRBIG00000030714-10095.604Rhinopithecus_bieti
ENSAPOG00000020779LSM510095.604ENSRBIG00000027803-10096.774Rhinopithecus_bieti
ENSAPOG00000020779LSM510094.505ENSRBIG00000024431-10094.505Rhinopithecus_bieti
ENSAPOG00000020779LSM510095.604ENSRBIG00000030340-10095.604Rhinopithecus_bieti
ENSAPOG00000020779LSM510095.604ENSRROG00000004655-10095.604Rhinopithecus_roxellana
ENSAPOG00000020779LSM510095.604ENSRROG00000023884-10095.604Rhinopithecus_roxellana
ENSAPOG00000020779LSM510095.604ENSRROG00000042782-10096.774Rhinopithecus_roxellana
ENSAPOG00000020779LSM58848.750YER146W-8848.780Saccharomyces_cerevisiae
ENSAPOG00000020779LSM510073.626ENSSBOG00000034794-10073.626Saimiri_boliviensis_boliviensis
ENSAPOG00000020779LSM510095.604ENSSBOG00000012312LSM510095.604Saimiri_boliviensis_boliviensis
ENSAPOG00000020779LSM510094.118ENSSBOG00000019124-10093.407Saimiri_boliviensis_boliviensis
ENSAPOG00000020779LSM510097.802ENSSFOG00015010099lsm510097.802Scleropages_formosus
ENSAPOG00000020779LSM510062.637ENSSMAG00000007895lsm510062.637Scophthalmus_maximus
ENSAPOG00000020779LSM568100.000ENSSDUG00000010762lsm5100100.000Seriola_dumerili
ENSAPOG00000020779LSM510098.901ENSSLDG00000025242lsm510098.901Seriola_lalandi_dorsalis
ENSAPOG00000020779LSM58977.632ENSSLDG00000008014-9376.923Seriola_lalandi_dorsalis
ENSAPOG00000020779LSM510067.033ENSSARG00000003330LSM510067.033Sorex_araneus
ENSAPOG00000020779LSM510093.407ENSSPUG00000002690LSM510095.161Sphenodon_punctatus
ENSAPOG00000020779LSM510063.736ENSSPAG00000005435lsm510063.736Stegastes_partitus
ENSAPOG00000020779LSM510095.604ENSSSCG00000026064-10095.604Sus_scrofa
ENSAPOG00000020779LSM58184.058ENSSSCG00000029661-9684.058Sus_scrofa
ENSAPOG00000020779LSM510093.407ENSTGUG00000017539LSM510093.407Taeniopygia_guttata
ENSAPOG00000020779LSM59687.356ENSTRUG00000017749lsm56984.783Takifugu_rubripes
ENSAPOG00000020779LSM510095.604ENSTNIG00000008695lsm510095.604Tetraodon_nigroviridis
ENSAPOG00000020779LSM510095.604ENSTBEG00000004876LSM510095.604Tupaia_belangeri
ENSAPOG00000020779LSM510095.604ENSTTRG00000004237LSM510095.604Tursiops_truncatus
ENSAPOG00000020779LSM56186.538ENSUAMG00000009786LSM56886.538Ursus_americanus
ENSAPOG00000020779LSM510095.294ENSUMAG00000002625LSM56594.505Ursus_maritimus
ENSAPOG00000020779LSM510095.604ENSVPAG00000009985LSM510095.604Vicugna_pacos
ENSAPOG00000020779LSM510095.604ENSVVUG00000021311LSM510095.604Vulpes_vulpes
ENSAPOG00000020779LSM59695.122ENSXETG00000026465lsm510096.341Xenopus_tropicalis
ENSAPOG00000020779LSM568100.000ENSXCOG00000015348lsm5100100.000Xiphophorus_couchianus
ENSAPOG00000020779LSM510097.802ENSXMAG00000029988lsm510097.802Xiphophorus_maculatus

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