EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000021430 (Gene tree)
Gene ID: 110959530
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 9901 bases
Position: chrMVNR01000702.1:6202-16102
Accession: 110959530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000033069	zf-U11-48K	PF05253.12	9.2e-09	1	1
ENSAPOP00000033083	zf-U11-48K	PF05253.12	9.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000034313	-	1896	-	ENSAPOP00000033069	338 (aa)	-	UPI000B8F9842
ENSAPOT00000027605	-	2366	XM_022206416	ENSAPOP00000033083	338 (aa)	XP_022062108	UPI000B8F9842

Gene Model

Click here to download ENSAPOG00000021430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000021430's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000021430	snrnp48	83	47.079	ENSG00000168566	SNRNP48	81	47.350	Homo_sapiens
ENSAPOG00000021430	snrnp48	96	44.857	ENSAMEG00000017349	SNRNP48	82	47.405	Ailuropoda_melanoleuca
ENSAPOG00000021430	snrnp48	96	75.153	ENSACIG00000002032	snrnp48	96	75.305	Amphilophus_citrinellus
ENSAPOG00000021430	snrnp48	100	96.154	ENSAOCG00000010562	snrnp48	100	96.154	Amphiprion_ocellaris
ENSAPOG00000021430	snrnp48	100	95.858	ENSAPEG00000003231	snrnp48	100	95.858	Amphiprion_percula
ENSAPOG00000021430	snrnp48	94	81.931	ENSATEG00000020210	snrnp48	95	82.298	Anabas_testudineus
ENSAPOG00000021430	snrnp48	81	49.829	ENSACAG00000002811	SNRNP48	73	53.165	Anolis_carolinensis
ENSAPOG00000021430	snrnp48	83	47.405	ENSANAG00000033538	SNRNP48	81	47.703	Aotus_nancymaae
ENSAPOG00000021430	snrnp48	94	58.438	ENSAMXG00000015309	snrnp48	97	58.333	Astyanax_mexicanus
ENSAPOG00000021430	snrnp48	92	43.323	ENSBTAG00000001123	SNRNP48	96	43.323	Bos_taurus
ENSAPOG00000021430	snrnp48	83	47.405	ENSCJAG00000021330	SNRNP48	81	47.703	Callithrix_jacchus
ENSAPOG00000021430	snrnp48	96	44.092	ENSCAFG00000009574	SNRNP48	67	47.350	Canis_familiaris
ENSAPOG00000021430	snrnp48	96	43.143	ENSCAFG00020013203	SNRNP48	81	46.853	Canis_lupus_dingo
ENSAPOG00000021430	snrnp48	91	43.452	ENSCHIG00000015216	SNRNP48	81	47.552	Capra_hircus
ENSAPOG00000021430	snrnp48	85	47.279	ENSTSYG00000000698	SNRNP48	82	47.569	Carlito_syrichta
ENSAPOG00000021430	snrnp48	87	42.857	ENSCAPG00000006768	SNRNP48	72	51.965	Cavia_aperea
ENSAPOG00000021430	snrnp48	96	43.059	ENSCPOG00000007910	SNRNP48	81	48.057	Cavia_porcellus
ENSAPOG00000021430	snrnp48	83	46.713	ENSCCAG00000035652	SNRNP48	81	46.996	Cebus_capucinus
ENSAPOG00000021430	snrnp48	96	43.391	ENSCATG00000033947	SNRNP48	81	47.350	Cercocebus_atys
ENSAPOG00000021430	snrnp48	83	47.751	ENSCLAG00000003765	SNRNP48	81	48.057	Chinchilla_lanigera
ENSAPOG00000021430	snrnp48	85	47.297	ENSCSAG00000007409	SNRNP48	81	47.703	Chlorocebus_sabaeus
ENSAPOG00000021430	snrnp48	86	46.250	ENSCPBG00000019146	SNRNP48	75	51.867	Chrysemys_picta_bellii
ENSAPOG00000021430	snrnp48	83	47.423	ENSCANG00000030017	SNRNP48	81	47.703	Colobus_angolensis_palliatus
ENSAPOG00000021430	snrnp48	85	39.865	ENSCGRG00001008805	-	78	42.231	Cricetulus_griseus_chok1gshd
ENSAPOG00000021430	snrnp48	96	43.149	ENSCGRG00001001076	-	82	47.183	Cricetulus_griseus_chok1gshd
ENSAPOG00000021430	snrnp48	96	43.149	ENSCGRG00000007781	Snrnp48	82	47.183	Cricetulus_griseus_crigri
ENSAPOG00000021430	snrnp48	78	73.106	ENSCSEG00000000722	snrnp48	90	68.966	Cynoglossus_semilaevis
ENSAPOG00000021430	snrnp48	93	75.710	ENSCVAG00000019829	snrnp48	73	78.799	Cyprinodon_variegatus
ENSAPOG00000021430	snrnp48	93	52.941	ENSDARG00000039989	snrnp48	80	57.299	Danio_rerio
ENSAPOG00000021430	snrnp48	80	48.561	ENSDNOG00000014978	SNRNP48	80	47.857	Dasypus_novemcinctus
ENSAPOG00000021430	snrnp48	96	42.980	ENSDORG00000015140	Snrnp48	81	47.183	Dipodomys_ordii
ENSAPOG00000021430	snrnp48	83	46.897	ENSEASG00005012021	SNRNP48	81	46.831	Equus_asinus_asinus
ENSAPOG00000021430	snrnp48	83	47.241	ENSECAG00000026937	SNRNP48	81	47.183	Equus_caballus
ENSAPOG00000021430	snrnp48	98	31.445	ENSEEUG00000015437	SNRNP48	98	30.523	Erinaceus_europaeus
ENSAPOG00000021430	snrnp48	85	65.172	ENSELUG00000009766	snrnp48	79	64.912	Esox_lucius
ENSAPOG00000021430	snrnp48	83	47.931	ENSFCAG00000018853	SNRNP48	81	48.239	Felis_catus
ENSAPOG00000021430	snrnp48	69	56.667	ENSFALG00000007797	SNRNP48	73	57.265	Ficedula_albicollis
ENSAPOG00000021430	snrnp48	96	43.678	ENSFDAG00000009231	SNRNP48	81	48.057	Fukomys_damarensis
ENSAPOG00000021430	snrnp48	65	80.717	ENSFHEG00000014647	snrnp48	95	79.121	Fundulus_heteroclitus
ENSAPOG00000021430	snrnp48	89	63.208	ENSGMOG00000018599	-	84	69.145	Gadus_morhua
ENSAPOG00000021430	snrnp48	78	51.825	ENSGALG00000013005	SNRNP48	77	56.596	Gallus_gallus
ENSAPOG00000021430	snrnp48	95	74.540	ENSGAFG00000021639	snrnp48	96	75.000	Gambusia_affinis
ENSAPOG00000021430	snrnp48	72	79.268	ENSGACG00000017756	-	96	73.148	Gasterosteus_aculeatus
ENSAPOG00000021430	snrnp48	82	47.020	ENSGAGG00000000865	SNRNP48	78	51.029	Gopherus_agassizii
ENSAPOG00000021430	snrnp48	83	47.405	ENSGGOG00000013220	SNRNP48	81	47.703	Gorilla_gorilla
ENSAPOG00000021430	snrnp48	93	81.962	ENSHBUG00000017066	snrnp48	94	81.677	Haplochromis_burtoni
ENSAPOG00000021430	snrnp48	83	46.713	ENSHGLG00000015241	SNRNP48	81	46.996	Heterocephalus_glaber_female
ENSAPOG00000021430	snrnp48	83	46.713	ENSHGLG00100010027	SNRNP48	81	46.996	Heterocephalus_glaber_male
ENSAPOG00000021430	snrnp48	75	75.099	ENSHCOG00000014066	snrnp48	95	69.697	Hippocampus_comes
ENSAPOG00000021430	snrnp48	96	42.165	ENSSTOG00000014635	SNRNP48	97	43.068	Ictidomys_tridecemlineatus
ENSAPOG00000021430	snrnp48	83	47.917	ENSJJAG00000011495	Snrnp48	81	48.227	Jaculus_jaculus
ENSAPOG00000021430	snrnp48	95	76.471	ENSKMAG00000016514	snrnp48	95	78.328	Kryptolebias_marmoratus
ENSAPOG00000021430	snrnp48	82	78.339	ENSLBEG00000026249	snrnp48	95	77.778	Labrus_bergylta
ENSAPOG00000021430	snrnp48	91	48.503	ENSLACG00000003958	SNRNP48	83	51.220	Latimeria_chalumnae
ENSAPOG00000021430	snrnp48	83	60.284	ENSLOCG00000004187	snrnp48	94	56.250	Lepisosteus_oculatus
ENSAPOG00000021430	snrnp48	80	47.482	ENSLAFG00000011152	SNRNP48	80	46.786	Loxodonta_africana
ENSAPOG00000021430	snrnp48	83	47.405	ENSMFAG00000045216	SNRNP48	81	47.703	Macaca_fascicularis
ENSAPOG00000021430	snrnp48	83	47.405	ENSMMUG00000014785	SNRNP48	81	47.703	Macaca_mulatta
ENSAPOG00000021430	snrnp48	83	47.405	ENSMNEG00000042269	SNRNP48	81	47.703	Macaca_nemestrina
ENSAPOG00000021430	snrnp48	83	47.405	ENSMLEG00000034004	SNRNP48	81	47.703	Mandrillus_leucophaeus
ENSAPOG00000021430	snrnp48	95	77.019	ENSMAMG00000018673	snrnp48	83	76.708	Mastacembelus_armatus
ENSAPOG00000021430	snrnp48	81	49.834	ENSMGAG00000006037	SNRNP48	79	56.596	Meleagris_gallopavo
ENSAPOG00000021430	snrnp48	96	44.023	ENSMAUG00000011944	Snrnp48	82	48.239	Mesocricetus_auratus
ENSAPOG00000021430	snrnp48	83	46.552	ENSMICG00000012497	SNRNP48	81	46.831	Microcebus_murinus
ENSAPOG00000021430	snrnp48	96	44.186	ENSMOCG00000015555	Snrnp48	82	47.719	Microtus_ochrogaster
ENSAPOG00000021430	snrnp48	56	85.789	ENSMMOG00000003072	-	60	85.789	Mola_mola
ENSAPOG00000021430	snrnp48	84	47.651	ENSMODG00000009996	SNRNP48	78	47.945	Monodelphis_domestica
ENSAPOG00000021430	snrnp48	95	79.503	ENSMALG00000005725	snrnp48	95	79.503	Monopterus_albus
ENSAPOG00000021430	snrnp48	96	43.440	MGP_CAROLIEiJ_G0018441	Snrnp48	82	47.535	Mus_caroli
ENSAPOG00000021430	snrnp48	96	43.440	ENSMUSG00000021431	Snrnp48	82	47.535	Mus_musculus
ENSAPOG00000021430	snrnp48	96	43.732	MGP_PahariEiJ_G0019509	Snrnp48	82	47.887	Mus_pahari
ENSAPOG00000021430	snrnp48	96	43.440	MGP_SPRETEiJ_G0019321	Snrnp48	82	47.535	Mus_spretus
ENSAPOG00000021430	snrnp48	96	44.126	ENSNGAG00000004849	Snrnp48	81	48.239	Nannospalax_galili
ENSAPOG00000021430	snrnp48	93	82.278	ENSNBRG00000012127	snrnp48	94	81.988	Neolamprologus_brichardi
ENSAPOG00000021430	snrnp48	83	47.423	ENSNLEG00000011667	SNRNP48	81	47.703	Nomascus_leucogenys
ENSAPOG00000021430	snrnp48	83	45.296	ENSOPRG00000015471	SNRNP48	86	45.230	Ochotona_princeps
ENSAPOG00000021430	snrnp48	93	82.911	ENSONIG00000001520	snrnp48	94	82.609	Oreochromis_niloticus
ENSAPOG00000021430	snrnp48	53	37.811	ENSOANG00000019888	-	96	38.806	Ornithorhynchus_anatinus
ENSAPOG00000021430	snrnp48	79	47.080	ENSOCUG00000005168	SNRNP48	91	47.222	Oryctolagus_cuniculus
ENSAPOG00000021430	snrnp48	88	80.537	ENSORLG00000015654	snrnp48	94	79.938	Oryzias_latipes
ENSAPOG00000021430	snrnp48	88	78.188	ENSORLG00020015976	snrnp48	80	79.321	Oryzias_latipes_hni
ENSAPOG00000021430	snrnp48	88	78.523	ENSORLG00015022379	snrnp48	81	79.630	Oryzias_latipes_hsok
ENSAPOG00000021430	snrnp48	93	79.874	ENSOMEG00000022007	snrnp48	94	79.321	Oryzias_melastigma
ENSAPOG00000021430	snrnp48	82	47.038	ENSOGAG00000005275	SNRNP48	82	46.975	Otolemur_garnettii
ENSAPOG00000021430	snrnp48	69	50.847	ENSOARG00000017319	SNRNP48	77	51.304	Ovis_aries
ENSAPOG00000021430	snrnp48	83	47.423	ENSPPAG00000032873	SNRNP48	81	47.703	Pan_paniscus
ENSAPOG00000021430	snrnp48	83	47.586	ENSPPRG00000004283	SNRNP48	81	47.887	Panthera_pardus
ENSAPOG00000021430	snrnp48	69	50.420	ENSPTIG00000013502	SNRNP48	77	50.862	Panthera_tigris_altaica
ENSAPOG00000021430	snrnp48	83	47.423	ENSPTRG00000017703	SNRNP48	81	47.703	Pan_troglodytes
ENSAPOG00000021430	snrnp48	83	47.405	ENSPANG00000000771	SNRNP48	81	47.703	Papio_anubis
ENSAPOG00000021430	snrnp48	83	60.627	ENSPKIG00000013703	snrnp48	60	61.210	Paramormyrops_kingsleyae
ENSAPOG00000021430	snrnp48	80	47.297	ENSPSIG00000002213	SNRNP48	74	51.899	Pelodiscus_sinensis
ENSAPOG00000021430	snrnp48	77	67.041	ENSPMGG00000008120	snrnp48	94	67.041	Periophthalmus_magnuspinnatus
ENSAPOG00000021430	snrnp48	96	44.606	ENSPEMG00000008872	Snrnp48	82	48.944	Peromyscus_maniculatus_bairdii
ENSAPOG00000021430	snrnp48	95	76.074	ENSPFOG00000003578	snrnp48	96	75.610	Poecilia_formosa
ENSAPOG00000021430	snrnp48	70	80.085	ENSPLAG00000002290	snrnp48	82	80.085	Poecilia_latipinna
ENSAPOG00000021430	snrnp48	95	76.074	ENSPMEG00000018033	snrnp48	96	75.610	Poecilia_mexicana
ENSAPOG00000021430	snrnp48	81	77.091	ENSPREG00000018541	snrnp48	96	75.305	Poecilia_reticulata
ENSAPOG00000021430	snrnp48	83	46.713	ENSPPYG00000016209	SNRNP48	81	46.996	Pongo_abelii
ENSAPOG00000021430	snrnp48	71	36.508	ENSPCAG00000011991	SNRNP48	93	37.849	Procavia_capensis
ENSAPOG00000021430	snrnp48	83	46.875	ENSPVAG00000002854	SNRNP48	81	46.809	Pteropus_vampyrus
ENSAPOG00000021430	snrnp48	92	82.637	ENSPNYG00000015399	snrnp48	91	84.397	Pundamilia_nyererei
ENSAPOG00000021430	snrnp48	96	43.466	ENSRNOG00000013756	Snrnp48	82	48.592	Rattus_norvegicus
ENSAPOG00000021430	snrnp48	83	47.751	ENSRBIG00000043856	SNRNP48	87	47.703	Rhinopithecus_bieti
ENSAPOG00000021430	snrnp48	83	47.423	ENSRROG00000043229	SNRNP48	81	47.703	Rhinopithecus_roxellana
ENSAPOG00000021430	snrnp48	83	47.751	ENSSBOG00000019486	SNRNP48	81	48.057	Saimiri_boliviensis_boliviensis
ENSAPOG00000021430	snrnp48	82	47.782	ENSSHAG00000014483	SNRNP48	81	48.084	Sarcophilus_harrisii
ENSAPOG00000021430	snrnp48	73	62.451	ENSSFOG00015006610	snrnp48	68	60.554	Scleropages_formosus
ENSAPOG00000021430	snrnp48	95	82.866	ENSSDUG00000014953	snrnp48	95	82.866	Seriola_dumerili
ENSAPOG00000021430	snrnp48	95	83.178	ENSSLDG00000005989	snrnp48	95	83.178	Seriola_lalandi_dorsalis
ENSAPOG00000021430	snrnp48	71	52.400	ENSSPUG00000006257	SNRNP48	68	52.869	Sphenodon_punctatus
ENSAPOG00000021430	snrnp48	96	91.641	ENSSPAG00000006454	snrnp48	96	91.641	Stegastes_partitus
ENSAPOG00000021430	snrnp48	82	50.662	ENSTGUG00000007575	SNRNP48	73	56.410	Taeniopygia_guttata
ENSAPOG00000021430	snrnp48	95	67.284	ENSTRUG00000007031	snrnp48	94	72.615	Takifugu_rubripes
ENSAPOG00000021430	snrnp48	99	67.062	ENSTNIG00000012977	-	92	68.634	Tetraodon_nigroviridis
ENSAPOG00000021430	snrnp48	75	47.909	ENSTBEG00000015620	SNRNP48	77	47.909	Tupaia_belangeri
ENSAPOG00000021430	snrnp48	91	43.155	ENSTTRG00000016715	SNRNP48	81	47.535	Tursiops_truncatus
ENSAPOG00000021430	snrnp48	96	43.804	ENSUAMG00000003690	SNRNP48	81	48.582	Ursus_americanus
ENSAPOG00000021430	snrnp48	69	50.000	ENSVPAG00000003557	SNRNP48	77	50.435	Vicugna_pacos
ENSAPOG00000021430	snrnp48	96	43.143	ENSVVUG00000004996	SNRNP48	81	46.853	Vulpes_vulpes
ENSAPOG00000021430	snrnp48	87	47.403	ENSXETG00000020447	snrnp48	95	45.000	Xenopus_tropicalis
ENSAPOG00000021430	snrnp48	70	78.059	ENSXCOG00000004478	snrnp48	95	67.077	Xiphophorus_couchianus
ENSAPOG00000021430	snrnp48	95	75.153	ENSXMAG00000013595	snrnp48	96	74.695	Xiphophorus_maculatus