EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000021772 (Gene tree)
Gene ID: 110953651
Gene Symbol: smndc1
Alias: TDRD10|spf30|wu:fb37h07|wu:fc23a07
Full Name: survival motor neuron domain containing 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 4019 bases
Position: chrMVNR01000304.1:432467-436485
Accession: 110953651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000018415	TUDOR	PF00567.24	2.7e-05	1	1
ENSAPOP00000018415	SMN	PF06003.12	2.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000034423	-	1092	XM_022197768	ENSAPOP00000018415	238 (aa)	XP_022053460	UPI000B8F0A65

Gene Model

Click here to download ENSAPOG00000021772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000021772's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000021772	smndc1	100	75.210	ENSG00000119953	SMNDC1	100	75.210	Homo_sapiens
ENSAPOG00000021772	smndc1	100	74.790	ENSAMEG00000005251	SMNDC1	100	74.790	Ailuropoda_melanoleuca
ENSAPOG00000021772	smndc1	100	92.857	ENSACIG00000004819	smndc1	100	92.857	Amphilophus_citrinellus
ENSAPOG00000021772	smndc1	100	98.739	ENSAOCG00000017869	smndc1	100	98.739	Amphiprion_ocellaris
ENSAPOG00000021772	smndc1	100	98.739	ENSAPEG00000007752	smndc1	100	98.739	Amphiprion_percula
ENSAPOG00000021772	smndc1	100	92.857	ENSATEG00000006830	smndc1	100	92.857	Anabas_testudineus
ENSAPOG00000021772	smndc1	83	75.758	ENSAPLG00000004322	SMNDC1	100	75.758	Anas_platyrhynchos
ENSAPOG00000021772	smndc1	100	76.050	ENSACAG00000005983	SMNDC1	100	76.050	Anolis_carolinensis
ENSAPOG00000021772	smndc1	100	74.790	ENSANAG00000032875	SMNDC1	100	74.790	Aotus_nancymaae
ENSAPOG00000021772	smndc1	100	91.176	ENSACLG00000016360	smndc1	100	91.176	Astatotilapia_calliptera
ENSAPOG00000021772	smndc1	100	82.353	ENSAMXG00000020310	smndc1	100	82.353	Astyanax_mexicanus
ENSAPOG00000021772	smndc1	100	74.790	ENSBTAG00000000551	SMNDC1	100	74.790	Bos_taurus
ENSAPOG00000021772	smndc1	100	74.790	ENSCJAG00000018624	SMNDC1	100	74.790	Callithrix_jacchus
ENSAPOG00000021772	smndc1	100	74.790	ENSCAFG00000010720	SMNDC1	100	74.790	Canis_familiaris
ENSAPOG00000021772	smndc1	100	74.790	ENSCAFG00020011913	SMNDC1	100	74.790	Canis_lupus_dingo
ENSAPOG00000021772	smndc1	100	74.790	ENSCHIG00000010604	SMNDC1	100	74.790	Capra_hircus
ENSAPOG00000021772	smndc1	100	74.790	ENSTSYG00000026454	SMNDC1	100	74.790	Carlito_syrichta
ENSAPOG00000021772	smndc1	100	61.250	ENSCAPG00000009132	SMNDC1	100	72.772	Cavia_aperea
ENSAPOG00000021772	smndc1	100	76.151	ENSCPOG00000031666	SMNDC1	100	76.151	Cavia_porcellus
ENSAPOG00000021772	smndc1	100	74.790	ENSCCAG00000021793	SMNDC1	100	74.790	Cebus_capucinus
ENSAPOG00000021772	smndc1	100	74.370	ENSCATG00000035910	SMNDC1	100	74.370	Cercocebus_atys
ENSAPOG00000021772	smndc1	100	74.790	ENSCLAG00000002838	SMNDC1	100	76.151	Chinchilla_lanigera
ENSAPOG00000021772	smndc1	100	74.790	ENSCSAG00000005169	SMNDC1	100	74.790	Chlorocebus_sabaeus
ENSAPOG00000021772	smndc1	81	69.948	ENSCHOG00000002936	SMNDC1	100	69.948	Choloepus_hoffmanni
ENSAPOG00000021772	smndc1	100	75.210	ENSCPBG00000012837	SMNDC1	100	75.210	Chrysemys_picta_bellii
ENSAPOG00000021772	smndc1	100	57.983	ENSCANG00000036994	-	100	57.983	Colobus_angolensis_palliatus
ENSAPOG00000021772	smndc1	100	74.790	ENSCANG00000031720	-	100	74.790	Colobus_angolensis_palliatus
ENSAPOG00000021772	smndc1	100	68.487	ENSCANG00000034620	-	100	68.487	Colobus_angolensis_palliatus
ENSAPOG00000021772	smndc1	100	74.370	ENSCGRG00001012973	Smndc1	100	74.370	Cricetulus_griseus_chok1gshd
ENSAPOG00000021772	smndc1	100	74.370	ENSCGRG00000012396	Smndc1	100	74.370	Cricetulus_griseus_crigri
ENSAPOG00000021772	smndc1	100	86.975	ENSCSEG00000015621	smndc1	100	86.975	Cynoglossus_semilaevis
ENSAPOG00000021772	smndc1	100	91.176	ENSCVAG00000020432	smndc1	100	91.176	Cyprinodon_variegatus
ENSAPOG00000021772	smndc1	100	84.100	ENSDARG00000056235	smndc1	100	84.100	Danio_rerio
ENSAPOG00000021772	smndc1	100	74.790	ENSDNOG00000016387	SMNDC1	83	74.790	Dasypus_novemcinctus
ENSAPOG00000021772	smndc1	100	74.790	ENSDORG00000023715	Smndc1	100	74.790	Dipodomys_ordii
ENSAPOG00000021772	smndc1	95	40.562	FBgn0039977	CG17454	98	42.169	Drosophila_melanogaster
ENSAPOG00000021772	smndc1	100	67.635	ENSEBUG00000010929	smndc1	100	68.880	Eptatretus_burgeri
ENSAPOG00000021772	smndc1	100	74.790	ENSEASG00005014930	SMNDC1	100	74.790	Equus_asinus_asinus
ENSAPOG00000021772	smndc1	100	74.790	ENSECAG00000029973	SMNDC1	100	74.790	Equus_caballus
ENSAPOG00000021772	smndc1	83	54.040	ENSEEUG00000013407	-	100	54.040	Erinaceus_europaeus
ENSAPOG00000021772	smndc1	100	84.034	ENSELUG00000000227	smndc1	100	84.034	Esox_lucius
ENSAPOG00000021772	smndc1	100	74.790	ENSFCAG00000027353	SMNDC1	100	74.790	Felis_catus
ENSAPOG00000021772	smndc1	100	76.471	ENSFALG00000002306	SMNDC1	100	76.471	Ficedula_albicollis
ENSAPOG00000021772	smndc1	100	76.569	ENSFDAG00000006468	SMNDC1	100	76.569	Fukomys_damarensis
ENSAPOG00000021772	smndc1	100	92.017	ENSFHEG00000020150	smndc1	100	92.017	Fundulus_heteroclitus
ENSAPOG00000021772	smndc1	100	85.294	ENSGMOG00000016585	smndc1	100	85.294	Gadus_morhua
ENSAPOG00000021772	smndc1	100	76.471	ENSGALG00000008561	SMNDC1	100	76.471	Gallus_gallus
ENSAPOG00000021772	smndc1	100	90.336	ENSGAFG00000011582	smndc1	100	90.336	Gambusia_affinis
ENSAPOG00000021772	smndc1	100	90.756	ENSGACG00000009468	smndc1	100	90.756	Gasterosteus_aculeatus
ENSAPOG00000021772	smndc1	100	75.210	ENSGAGG00000024547	SMNDC1	100	75.210	Gopherus_agassizii
ENSAPOG00000021772	smndc1	100	74.790	ENSGGOG00000010071	SMNDC1	100	74.790	Gorilla_gorilla
ENSAPOG00000021772	smndc1	100	91.176	ENSHBUG00000017596	smndc1	100	91.176	Haplochromis_burtoni
ENSAPOG00000021772	smndc1	100	55.102	ENSHGLG00000001157	-	100	55.102	Heterocephalus_glaber_female
ENSAPOG00000021772	smndc1	100	76.569	ENSHGLG00000013390	-	100	76.569	Heterocephalus_glaber_female
ENSAPOG00000021772	smndc1	100	60.408	ENSHGLG00100004278	-	100	59.438	Heterocephalus_glaber_male
ENSAPOG00000021772	smndc1	100	76.569	ENSHGLG00100004814	-	100	76.569	Heterocephalus_glaber_male
ENSAPOG00000021772	smndc1	100	84.100	ENSHCOG00000000783	smndc1	100	84.100	Hippocampus_comes
ENSAPOG00000021772	smndc1	100	84.874	ENSIPUG00000004217	smndc1	100	84.874	Ictalurus_punctatus
ENSAPOG00000021772	smndc1	100	74.790	ENSSTOG00000006088	SMNDC1	100	74.790	Ictidomys_tridecemlineatus
ENSAPOG00000021772	smndc1	100	74.790	ENSJJAG00000019974	Smndc1	100	76.151	Jaculus_jaculus
ENSAPOG00000021772	smndc1	100	90.336	ENSKMAG00000020134	smndc1	100	90.336	Kryptolebias_marmoratus
ENSAPOG00000021772	smndc1	100	90.756	ENSLBEG00000004598	smndc1	100	90.756	Labrus_bergylta
ENSAPOG00000021772	smndc1	100	75.630	ENSLACG00000007784	SMNDC1	100	75.630	Latimeria_chalumnae
ENSAPOG00000021772	smndc1	100	81.933	ENSLOCG00000012355	smndc1	100	81.933	Lepisosteus_oculatus
ENSAPOG00000021772	smndc1	100	74.370	ENSLAFG00000014353	SMNDC1	100	74.370	Loxodonta_africana
ENSAPOG00000021772	smndc1	100	74.790	ENSMFAG00000002433	-	100	74.790	Macaca_fascicularis
ENSAPOG00000021772	smndc1	100	62.605	ENSMFAG00000038381	-	100	62.605	Macaca_fascicularis
ENSAPOG00000021772	smndc1	100	74.790	ENSMMUG00000007775	SMNDC1	100	74.790	Macaca_mulatta
ENSAPOG00000021772	smndc1	100	62.605	ENSMMUG00000045875	-	100	62.605	Macaca_mulatta
ENSAPOG00000021772	smndc1	100	74.790	ENSMNEG00000042963	-	100	74.790	Macaca_nemestrina
ENSAPOG00000021772	smndc1	100	65.546	ENSMNEG00000033853	-	100	65.546	Macaca_nemestrina
ENSAPOG00000021772	smndc1	100	70.293	ENSMLEG00000040236	SMNDC1	100	69.874	Mandrillus_leucophaeus
ENSAPOG00000021772	smndc1	89	91.549	ENSMAMG00000018233	smndc1	87	91.549	Mastacembelus_armatus
ENSAPOG00000021772	smndc1	100	91.176	ENSMZEG00005027510	smndc1	100	91.176	Maylandia_zebra
ENSAPOG00000021772	smndc1	91	72.685	ENSMGAG00000010777	SMNDC1	91	72.685	Meleagris_gallopavo
ENSAPOG00000021772	smndc1	99	62.025	ENSMAUG00000005459	-	93	62.025	Mesocricetus_auratus
ENSAPOG00000021772	smndc1	100	74.790	ENSMAUG00000012243	-	100	74.790	Mesocricetus_auratus
ENSAPOG00000021772	smndc1	100	64.286	ENSMICG00000031640	-	100	64.286	Microcebus_murinus
ENSAPOG00000021772	smndc1	100	74.370	ENSMICG00000027336	-	100	75.732	Microcebus_murinus
ENSAPOG00000021772	smndc1	100	74.370	ENSMOCG00000002458	Smndc1	100	74.370	Microtus_ochrogaster
ENSAPOG00000021772	smndc1	100	89.496	ENSMMOG00000008856	smndc1	100	89.496	Mola_mola
ENSAPOG00000021772	smndc1	100	75.210	ENSMODG00000010542	SMNDC1	100	75.210	Monodelphis_domestica
ENSAPOG00000021772	smndc1	100	89.496	ENSMALG00000017598	smndc1	100	89.496	Monopterus_albus
ENSAPOG00000021772	smndc1	100	75.210	MGP_CAROLIEiJ_G0023072	Smndc1	100	76.569	Mus_caroli
ENSAPOG00000021772	smndc1	100	75.210	ENSMUSG00000025024	Smndc1	100	75.210	Mus_musculus
ENSAPOG00000021772	smndc1	100	75.210	MGP_PahariEiJ_G0014560	Smndc1	100	75.210	Mus_pahari
ENSAPOG00000021772	smndc1	100	75.210	MGP_SPRETEiJ_G0023993	Smndc1	100	75.210	Mus_spretus
ENSAPOG00000021772	smndc1	100	74.790	ENSMPUG00000002089	SMNDC1	100	74.790	Mustela_putorius_furo
ENSAPOG00000021772	smndc1	100	74.790	ENSMLUG00000016007	SMNDC1	100	74.790	Myotis_lucifugus
ENSAPOG00000021772	smndc1	100	76.987	ENSNGAG00000006833	Smndc1	100	76.987	Nannospalax_galili
ENSAPOG00000021772	smndc1	100	91.176	ENSNBRG00000017089	smndc1	100	91.176	Neolamprologus_brichardi
ENSAPOG00000021772	smndc1	100	74.790	ENSNLEG00000015471	SMNDC1	100	74.790	Nomascus_leucogenys
ENSAPOG00000021772	smndc1	82	54.229	ENSMEUG00000010120	-	98	54.229	Notamacropus_eugenii
ENSAPOG00000021772	smndc1	100	76.151	ENSOPRG00000015348	SMNDC1	100	76.151	Ochotona_princeps
ENSAPOG00000021772	smndc1	100	53.782	ENSODEG00000007594	-	100	51.681	Octodon_degus
ENSAPOG00000021772	smndc1	100	91.176	ENSONIG00000000434	smndc1	100	91.176	Oreochromis_niloticus
ENSAPOG00000021772	smndc1	100	75.630	ENSOANG00000001598	SMNDC1	100	75.630	Ornithorhynchus_anatinus
ENSAPOG00000021772	smndc1	100	76.151	ENSOCUG00000008145	-	100	76.151	Oryctolagus_cuniculus
ENSAPOG00000021772	smndc1	100	54.202	ENSOCUG00000012274	-	100	56.723	Oryctolagus_cuniculus
ENSAPOG00000021772	smndc1	100	84.034	ENSORLG00000005934	smndc1	95	84.034	Oryzias_latipes
ENSAPOG00000021772	smndc1	100	84.034	ENSORLG00020008796	smndc1	95	84.034	Oryzias_latipes_hni
ENSAPOG00000021772	smndc1	100	83.613	ENSORLG00015013666	smndc1	100	83.613	Oryzias_latipes_hsok
ENSAPOG00000021772	smndc1	100	81.933	ENSOMEG00000007590	smndc1	100	81.933	Oryzias_melastigma
ENSAPOG00000021772	smndc1	100	74.790	ENSOGAG00000000571	SMNDC1	100	74.790	Otolemur_garnettii
ENSAPOG00000021772	smndc1	100	74.790	ENSOARG00000009500	SMNDC1	100	74.790	Ovis_aries
ENSAPOG00000021772	smndc1	100	74.790	ENSPPAG00000027815	SMNDC1	100	74.790	Pan_paniscus
ENSAPOG00000021772	smndc1	100	74.790	ENSPPRG00000013749	SMNDC1	100	74.790	Panthera_pardus
ENSAPOG00000021772	smndc1	100	74.790	ENSPTIG00000011451	SMNDC1	100	74.790	Panthera_tigris_altaica
ENSAPOG00000021772	smndc1	100	74.790	ENSPTRG00000002937	SMNDC1	100	74.790	Pan_troglodytes
ENSAPOG00000021772	smndc1	100	74.790	ENSPANG00000020805	-	100	74.790	Papio_anubis
ENSAPOG00000021772	smndc1	100	70.168	ENSPANG00000031346	-	100	70.168	Papio_anubis
ENSAPOG00000021772	smndc1	100	80.252	ENSPKIG00000017164	smndc1	100	80.252	Paramormyrops_kingsleyae
ENSAPOG00000021772	smndc1	100	75.630	ENSPSIG00000012257	SMNDC1	100	75.630	Pelodiscus_sinensis
ENSAPOG00000021772	smndc1	100	82.773	ENSPMGG00000015651	smndc1	100	82.773	Periophthalmus_magnuspinnatus
ENSAPOG00000021772	smndc1	100	74.790	ENSPEMG00000022058	Smndc1	100	74.790	Peromyscus_maniculatus_bairdii
ENSAPOG00000021772	smndc1	100	64.198	ENSPMAG00000007705	smndc1	100	64.198	Petromyzon_marinus
ENSAPOG00000021772	smndc1	100	75.210	ENSPCIG00000018419	SMNDC1	100	75.210	Phascolarctos_cinereus
ENSAPOG00000021772	smndc1	95	57.965	ENSPCIG00000009693	-	98	57.965	Phascolarctos_cinereus
ENSAPOG00000021772	smndc1	100	91.597	ENSPFOG00000017113	smndc1	100	91.597	Poecilia_formosa
ENSAPOG00000021772	smndc1	100	90.756	ENSPLAG00000010372	smndc1	100	90.756	Poecilia_latipinna
ENSAPOG00000021772	smndc1	100	91.597	ENSPMEG00000012288	smndc1	100	91.597	Poecilia_mexicana
ENSAPOG00000021772	smndc1	100	89.496	ENSPREG00000012279	smndc1	100	89.496	Poecilia_reticulata
ENSAPOG00000021772	smndc1	100	74.790	ENSPPYG00000002643	SMNDC1	100	74.790	Pongo_abelii
ENSAPOG00000021772	smndc1	81	70.466	ENSPCAG00000016183	SMNDC1	100	70.466	Procavia_capensis
ENSAPOG00000021772	smndc1	100	74.370	ENSPCOG00000024343	SMNDC1	100	74.370	Propithecus_coquereli
ENSAPOG00000021772	smndc1	100	61.088	ENSPVAG00000004368	SMNDC1	100	61.088	Pteropus_vampyrus
ENSAPOG00000021772	smndc1	83	90.404	ENSPNYG00000024093	smndc1	86	90.404	Pundamilia_nyererei
ENSAPOG00000021772	smndc1	100	80.672	ENSPNAG00000025285	smndc1	100	80.672	Pygocentrus_nattereri
ENSAPOG00000021772	smndc1	100	75.210	ENSRNOG00000014833	Smndc1	100	76.569	Rattus_norvegicus
ENSAPOG00000021772	smndc1	100	60.504	ENSRBIG00000032452	-	100	60.504	Rhinopithecus_bieti
ENSAPOG00000021772	smndc1	100	74.370	ENSRBIG00000000224	-	100	74.370	Rhinopithecus_bieti
ENSAPOG00000021772	smndc1	100	74.790	ENSRROG00000044992	-	100	74.790	Rhinopithecus_roxellana
ENSAPOG00000021772	smndc1	100	60.924	ENSRROG00000039125	-	100	60.924	Rhinopithecus_roxellana
ENSAPOG00000021772	smndc1	100	74.790	ENSSBOG00000026789	SMNDC1	100	74.790	Saimiri_boliviensis_boliviensis
ENSAPOG00000021772	smndc1	100	75.210	ENSSHAG00000015189	SMNDC1	100	75.210	Sarcophilus_harrisii
ENSAPOG00000021772	smndc1	100	79.412	ENSSFOG00015008311	smndc1	100	79.412	Scleropages_formosus
ENSAPOG00000021772	smndc1	100	89.916	ENSSMAG00000020118	smndc1	100	89.916	Scophthalmus_maximus
ENSAPOG00000021772	smndc1	100	93.697	ENSSDUG00000015330	smndc1	100	93.697	Seriola_dumerili
ENSAPOG00000021772	smndc1	100	93.697	ENSSLDG00000017325	smndc1	100	93.697	Seriola_lalandi_dorsalis
ENSAPOG00000021772	smndc1	100	76.569	ENSSARG00000006063	SMNDC1	100	76.569	Sorex_araneus
ENSAPOG00000021772	smndc1	100	76.050	ENSSPUG00000004574	SMNDC1	100	76.050	Sphenodon_punctatus
ENSAPOG00000021772	smndc1	100	94.958	ENSSPAG00000000338	smndc1	100	94.958	Stegastes_partitus
ENSAPOG00000021772	smndc1	100	74.790	ENSSSCG00000030507	SMNDC1	100	74.790	Sus_scrofa
ENSAPOG00000021772	smndc1	100	76.471	ENSTGUG00000010599	SMNDC1	100	76.471	Taeniopygia_guttata
ENSAPOG00000021772	smndc1	100	85.294	ENSTRUG00000023281	smndc1	100	85.294	Takifugu_rubripes
ENSAPOG00000021772	smndc1	100	85.714	ENSTNIG00000013331	smndc1	100	85.714	Tetraodon_nigroviridis
ENSAPOG00000021772	smndc1	100	76.151	ENSTBEG00000014337	SMNDC1	100	76.151	Tupaia_belangeri
ENSAPOG00000021772	smndc1	100	74.790	ENSUAMG00000008142	SMNDC1	100	74.790	Ursus_americanus
ENSAPOG00000021772	smndc1	100	74.790	ENSUMAG00000023722	SMNDC1	100	74.790	Ursus_maritimus
ENSAPOG00000021772	smndc1	83	74.242	ENSVPAG00000003402	SMNDC1	100	74.242	Vicugna_pacos
ENSAPOG00000021772	smndc1	100	74.790	ENSVVUG00000007820	SMNDC1	100	74.790	Vulpes_vulpes
ENSAPOG00000021772	smndc1	60	60.563	ENSXETG00000015415	SMNDC1	100	60.563	Xenopus_tropicalis
ENSAPOG00000021772	smndc1	100	89.916	ENSXCOG00000009159	smndc1	100	89.916	Xiphophorus_couchianus
ENSAPOG00000021772	smndc1	100	90.756	ENSXMAG00000012755	smndc1	100	90.756	Xiphophorus_maculatus