EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000021882 (Gene tree)
Gene ID: 110964257
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 6067 bases
Position: chrMVNR01001257.1:81836-87902
Accession: 110964257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000018519	RNA_pol_L_2	PF13656.6	3.7e-29	1	1
ENSAPOP00000033348	RNA_pol_L_2	PF13656.6	3.9e-29	1	1
ENSAPOP00000018519	RNA_pol_L	PF01193.24	4.1e-11	1	1
ENSAPOP00000033348	RNA_pol_L	PF01193.24	4.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000028114	-	336	-	ENSAPOP00000033348	111 (aa)	-	-
ENSAPOT00000028117	-	2753	XM_022212942	ENSAPOP00000018519	106 (aa)	XP_022068634	-

Gene Model

Click here to download ENSAPOG00000021882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000021882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000021882	polr1d	90	35.000	ENSAPOG00000019538	polr2j	83	35.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000021882	polr1d	98	67.568	ENSG00000186184	POLR1D	96	67.568	Homo_sapiens
ENSAPOG00000021882	polr1d	98	67.568	ENSAMEG00000019095	POLR1D	89	67.568	Ailuropoda_melanoleuca
ENSAPOG00000021882	polr1d	100	85.849	ENSACIG00000013328	polr1d	92	85.849	Amphilophus_citrinellus
ENSAPOG00000021882	polr1d	96	94.118	ENSAOCG00000018500	polr1d	90	93.204	Amphiprion_ocellaris
ENSAPOG00000021882	polr1d	97	97.087	ENSAPEG00000009489	polr1d	98	89.286	Amphiprion_percula
ENSAPOG00000021882	polr1d	96	88.235	ENSATEG00000019322	polr1d	93	86.538	Anabas_testudineus
ENSAPOG00000021882	polr1d	93	66.667	ENSACAG00000015753	POLR1D	87	65.347	Anolis_carolinensis
ENSAPOG00000021882	polr1d	98	67.568	ENSANAG00000024486	POLR1D	83	67.568	Aotus_nancymaae
ENSAPOG00000021882	polr1d	97	90.291	ENSACLG00000023805	polr1d	91	90.291	Astatotilapia_calliptera
ENSAPOG00000021882	polr1d	95	77.228	ENSAMXG00000036118	polr1d	90	75.728	Astyanax_mexicanus
ENSAPOG00000021882	polr1d	98	67.568	ENSBTAG00000033252	-	83	67.568	Bos_taurus
ENSAPOG00000021882	polr1d	98	67.568	ENSBTAG00000008642	POLR1D	83	67.568	Bos_taurus
ENSAPOG00000021882	polr1d	75	38.750	WBGene00010230	rpac-19	59	36.471	Caenorhabditis_elegans
ENSAPOG00000021882	polr1d	98	66.667	ENSCJAG00000044669	POLR1D	83	66.667	Callithrix_jacchus
ENSAPOG00000021882	polr1d	98	67.568	ENSCAFG00000006755	POLR1D	83	67.568	Canis_familiaris
ENSAPOG00000021882	polr1d	98	66.667	ENSCHIG00000021910	POLR1D	83	66.667	Capra_hircus
ENSAPOG00000021882	polr1d	97	68.182	ENSTSYG00000026817	-	83	68.182	Carlito_syrichta
ENSAPOG00000021882	polr1d	97	58.036	ENSTSYG00000034852	-	93	58.036	Carlito_syrichta
ENSAPOG00000021882	polr1d	56	61.017	ENSCAPG00000006058	-	69	55.882	Cavia_aperea
ENSAPOG00000021882	polr1d	56	61.017	ENSCPOG00000030450	-	69	55.882	Cavia_porcellus
ENSAPOG00000021882	polr1d	98	51.351	ENSCCAG00000020191	-	82	51.351	Cebus_capucinus
ENSAPOG00000021882	polr1d	98	68.468	ENSCCAG00000021349	-	83	68.468	Cebus_capucinus
ENSAPOG00000021882	polr1d	98	67.568	ENSCATG00000030710	-	83	67.568	Cercocebus_atys
ENSAPOG00000021882	polr1d	97	57.273	ENSCATG00000022900	-	82	57.273	Cercocebus_atys
ENSAPOG00000021882	polr1d	94	69.000	ENSCLAG00000017623	POLR1D	90	64.865	Chinchilla_lanigera
ENSAPOG00000021882	polr1d	95	76.238	ENSCPBG00000004719	POLR1D	100	76.238	Chrysemys_picta_bellii
ENSAPOG00000021882	polr1d	97	67.273	ENSCANG00000037694	-	83	67.273	Colobus_angolensis_palliatus
ENSAPOG00000021882	polr1d	98	67.568	ENSCANG00000028632	-	83	67.568	Colobus_angolensis_palliatus
ENSAPOG00000021882	polr1d	98	68.468	ENSCGRG00001021251	Polr1d	83	68.468	Cricetulus_griseus_chok1gshd
ENSAPOG00000021882	polr1d	98	68.468	ENSCGRG00000011639	Polr1d	83	68.468	Cricetulus_griseus_crigri
ENSAPOG00000021882	polr1d	96	86.275	ENSCSEG00000018268	polr1d	87	86.275	Cynoglossus_semilaevis
ENSAPOG00000021882	polr1d	96	84.314	ENSCVAG00000018527	polr1d	89	84.314	Cyprinodon_variegatus
ENSAPOG00000021882	polr1d	96	73.529	ENSDARG00000037570	polr1d	92	72.115	Danio_rerio
ENSAPOG00000021882	polr1d	98	65.766	ENSDNOG00000046247	-	83	65.766	Dasypus_novemcinctus
ENSAPOG00000021882	polr1d	98	65.766	ENSDNOG00000043676	-	83	65.766	Dasypus_novemcinctus
ENSAPOG00000021882	polr1d	98	67.568	ENSDORG00000029155	Polr1d	83	67.568	Dipodomys_ordii
ENSAPOG00000021882	polr1d	90	42.105	FBgn0086447	l(2)37Cg	90	42.105	Drosophila_melanogaster
ENSAPOG00000021882	polr1d	94	69.000	ENSETEG00000012797	POLR1D	81	69.000	Echinops_telfairi
ENSAPOG00000021882	polr1d	81	66.279	ENSEBUG00000011748	polr1d	60	66.279	Eptatretus_burgeri
ENSAPOG00000021882	polr1d	94	70.000	ENSEASG00005022487	POLR1D	83	68.224	Equus_asinus_asinus
ENSAPOG00000021882	polr1d	98	66.667	ENSEEUG00000013144	POLR1D	90	66.667	Erinaceus_europaeus
ENSAPOG00000021882	polr1d	93	80.000	ENSELUG00000005105	rpac2	88	80.000	Esox_lucius
ENSAPOG00000021882	polr1d	94	70.000	ENSFCAG00000030162	POLR1D	82	67.890	Felis_catus
ENSAPOG00000021882	polr1d	84	78.652	ENSFALG00000011463	POLR1D	90	76.923	Ficedula_albicollis
ENSAPOG00000021882	polr1d	94	68.000	ENSFDAG00000004463	POLR1D	83	63.964	Fukomys_damarensis
ENSAPOG00000021882	polr1d	96	82.353	ENSFHEG00000015410	polr1d	89	82.353	Fundulus_heteroclitus
ENSAPOG00000021882	polr1d	52	78.182	ENSGALG00000007470	POLR1D	56	77.193	Gallus_gallus
ENSAPOG00000021882	polr1d	95	88.119	ENSGAFG00000001693	polr1d	90	85.437	Gambusia_affinis
ENSAPOG00000021882	polr1d	96	85.294	ENSGACG00000018585	polr1d	94	82.883	Gasterosteus_aculeatus
ENSAPOG00000021882	polr1d	96	76.471	ENSGAGG00000008503	POLR1D	91	75.000	Gopherus_agassizii
ENSAPOG00000021882	polr1d	98	67.568	ENSGGOG00000004235	POLR1D	83	67.568	Gorilla_gorilla
ENSAPOG00000021882	polr1d	96	89.216	ENSHBUG00000002111	polr1d	89	89.216	Haplochromis_burtoni
ENSAPOG00000021882	polr1d	94	68.000	ENSHGLG00000003202	POLR1D	76	67.327	Heterocephalus_glaber_female
ENSAPOG00000021882	polr1d	94	68.000	ENSHGLG00100009393	POLR1D	76	67.327	Heterocephalus_glaber_male
ENSAPOG00000021882	polr1d	96	79.412	ENSHCOG00000003258	polr1d	89	79.412	Hippocampus_comes
ENSAPOG00000021882	polr1d	96	79.612	ENSIPUG00000014810	polr1d	90	79.612	Ictalurus_punctatus
ENSAPOG00000021882	polr1d	98	67.568	ENSSTOG00000013877	POLR1D	83	67.568	Ictidomys_tridecemlineatus
ENSAPOG00000021882	polr1d	98	54.054	ENSJJAG00000021667	-	65	54.054	Jaculus_jaculus
ENSAPOG00000021882	polr1d	98	67.568	ENSJJAG00000022671	-	93	67.568	Jaculus_jaculus
ENSAPOG00000021882	polr1d	96	82.353	ENSKMAG00000015256	polr1d	89	82.353	Kryptolebias_marmoratus
ENSAPOG00000021882	polr1d	96	88.235	ENSLBEG00000015919	polr1d	91	86.538	Labrus_bergylta
ENSAPOG00000021882	polr1d	94	67.000	ENSLACG00000006810	POLR1D	83	67.000	Latimeria_chalumnae
ENSAPOG00000021882	polr1d	67	80.282	ENSLOCG00000014976	polr1d	95	81.429	Lepisosteus_oculatus
ENSAPOG00000021882	polr1d	94	70.000	ENSLAFG00000032290	POLR1D	83	67.273	Loxodonta_africana
ENSAPOG00000021882	polr1d	98	67.568	ENSMFAG00000045264	POLR1D	86	67.568	Macaca_fascicularis
ENSAPOG00000021882	polr1d	86	57.143	ENSMMUG00000041570	-	77	63.529	Macaca_mulatta
ENSAPOG00000021882	polr1d	98	67.568	ENSMMUG00000020386	POLR1D	96	67.568	Macaca_mulatta
ENSAPOG00000021882	polr1d	98	67.568	ENSMNEG00000008630	-	83	67.568	Macaca_nemestrina
ENSAPOG00000021882	polr1d	97	54.545	ENSMNEG00000038120	-	81	54.545	Macaca_nemestrina
ENSAPOG00000021882	polr1d	97	59.091	ENSMLEG00000032251	-	82	59.091	Mandrillus_leucophaeus
ENSAPOG00000021882	polr1d	98	67.568	ENSMLEG00000041048	-	83	67.568	Mandrillus_leucophaeus
ENSAPOG00000021882	polr1d	96	88.235	ENSMAMG00000014834	polr1d	96	88.350	Mastacembelus_armatus
ENSAPOG00000021882	polr1d	97	90.291	ENSMZEG00005006638	polr1d	91	90.291	Maylandia_zebra
ENSAPOG00000021882	polr1d	87	79.348	ENSMGAG00000005322	POLR1D	87	77.895	Meleagris_gallopavo
ENSAPOG00000021882	polr1d	98	68.468	ENSMAUG00000001946	Polr1d	83	68.468	Mesocricetus_auratus
ENSAPOG00000021882	polr1d	98	65.766	ENSMICG00000016883	-	83	65.766	Microcebus_murinus
ENSAPOG00000021882	polr1d	95	55.238	ENSMICG00000007349	-	77	55.238	Microcebus_murinus
ENSAPOG00000021882	polr1d	98	66.667	ENSMOCG00000021288	Polr1d	83	66.667	Microtus_ochrogaster
ENSAPOG00000021882	polr1d	96	89.216	ENSMMOG00000009605	polr1d	89	89.216	Mola_mola
ENSAPOG00000021882	polr1d	96	74.510	ENSMODG00000023881	POLR1D	96	72.477	Monodelphis_domestica
ENSAPOG00000021882	polr1d	96	87.255	ENSMALG00000010652	polr1d	89	87.255	Monopterus_albus
ENSAPOG00000021882	polr1d	94	69.000	MGP_CAROLIEiJ_G0028034	Polr1d	76	68.317	Mus_caroli
ENSAPOG00000021882	polr1d	94	69.000	ENSMUSG00000029642	Polr1d	76	68.317	Mus_musculus
ENSAPOG00000021882	polr1d	94	69.000	MGP_PahariEiJ_G0024600	Polr1d	76	68.317	Mus_pahari
ENSAPOG00000021882	polr1d	94	68.000	MGP_SPRETEiJ_G0029032	Polr1d	76	67.327	Mus_spretus
ENSAPOG00000021882	polr1d	98	68.182	ENSMLUG00000027169	-	83	68.182	Myotis_lucifugus
ENSAPOG00000021882	polr1d	98	63.063	ENSMLUG00000004118	-	83	63.063	Myotis_lucifugus
ENSAPOG00000021882	polr1d	98	68.468	ENSNGAG00000006014	Polr1d	96	68.468	Nannospalax_galili
ENSAPOG00000021882	polr1d	96	89.216	ENSNBRG00000020327	polr1d	89	89.216	Neolamprologus_brichardi
ENSAPOG00000021882	polr1d	98	67.568	ENSNLEG00000000358	POLR1D	83	67.568	Nomascus_leucogenys
ENSAPOG00000021882	polr1d	94	69.000	ENSODEG00000005294	-	76	68.317	Octodon_degus
ENSAPOG00000021882	polr1d	95	57.143	ENSODEG00000014801	-	76	57.143	Octodon_degus
ENSAPOG00000021882	polr1d	96	76.471	ENSOANG00000008708	-	96	75.000	Ornithorhynchus_anatinus
ENSAPOG00000021882	polr1d	98	66.667	ENSOCUG00000015706	POLR1D	68	66.667	Oryctolagus_cuniculus
ENSAPOG00000021882	polr1d	100	80.189	ENSORLG00000010257	polr1d	89	80.392	Oryzias_latipes
ENSAPOG00000021882	polr1d	100	81.132	ENSORLG00020000533	polr1d	69	80.392	Oryzias_latipes_hni
ENSAPOG00000021882	polr1d	100	82.075	ENSORLG00015013267	polr1d	68	81.373	Oryzias_latipes_hsok
ENSAPOG00000021882	polr1d	96	81.373	ENSOMEG00000014912	polr1d	68	81.373	Oryzias_melastigma
ENSAPOG00000021882	polr1d	98	67.568	ENSOGAG00000014601	POLR1D	83	67.568	Otolemur_garnettii
ENSAPOG00000021882	polr1d	98	66.667	ENSOARG00000017005	POLR1D	85	66.667	Ovis_aries
ENSAPOG00000021882	polr1d	98	66.667	ENSPPAG00000028138	POLR1D	83	66.667	Pan_paniscus
ENSAPOG00000021882	polr1d	94	70.000	ENSPPRG00000003381	POLR1D	82	67.890	Panthera_pardus
ENSAPOG00000021882	polr1d	94	70.000	ENSPTIG00000018137	POLR1D	82	67.890	Panthera_tigris_altaica
ENSAPOG00000021882	polr1d	98	67.568	ENSPTRG00000005734	POLR1D	83	67.568	Pan_troglodytes
ENSAPOG00000021882	polr1d	98	67.568	ENSPANG00000020259	-	83	67.568	Papio_anubis
ENSAPOG00000021882	polr1d	97	58.182	ENSPANG00000035051	-	82	58.182	Papio_anubis
ENSAPOG00000021882	polr1d	84	79.775	ENSPKIG00000021891	polr1d	97	58.537	Paramormyrops_kingsleyae
ENSAPOG00000021882	polr1d	96	72.549	ENSPSIG00000011822	POLR1D	81	71.154	Pelodiscus_sinensis
ENSAPOG00000021882	polr1d	96	77.451	ENSPMGG00000010359	polr1d	94	74.074	Periophthalmus_magnuspinnatus
ENSAPOG00000021882	polr1d	96	66.667	ENSPMGG00000012998	POLR1D	79	63.889	Periophthalmus_magnuspinnatus
ENSAPOG00000021882	polr1d	98	68.468	ENSPEMG00000006336	-	85	68.468	Peromyscus_maniculatus_bairdii
ENSAPOG00000021882	polr1d	91	59.375	ENSPMAG00000004228	polr1d	81	59.375	Petromyzon_marinus
ENSAPOG00000021882	polr1d	96	74.510	ENSPCIG00000001673	POLR1D	96	72.477	Phascolarctos_cinereus
ENSAPOG00000021882	polr1d	97	84.466	ENSPFOG00000023343	polr1d	90	84.466	Poecilia_formosa
ENSAPOG00000021882	polr1d	97	84.466	ENSPLAG00000009675	polr1d	90	84.466	Poecilia_latipinna
ENSAPOG00000021882	polr1d	97	84.466	ENSPMEG00000004628	polr1d	90	84.466	Poecilia_mexicana
ENSAPOG00000021882	polr1d	97	84.466	ENSPREG00000022032	polr1d	90	84.466	Poecilia_reticulata
ENSAPOG00000021882	polr1d	98	65.766	ENSPCOG00000028175	POLR1D	83	65.766	Propithecus_coquereli
ENSAPOG00000021882	polr1d	96	89.216	ENSPNYG00000000107	polr1d	89	89.216	Pundamilia_nyererei
ENSAPOG00000021882	polr1d	92	77.320	ENSPNAG00000001512	polr1d	92	72.477	Pygocentrus_nattereri
ENSAPOG00000021882	polr1d	97	65.455	ENSRBIG00000000336	-	83	65.455	Rhinopithecus_bieti
ENSAPOG00000021882	polr1d	98	67.568	ENSRBIG00000036378	-	83	67.568	Rhinopithecus_bieti
ENSAPOG00000021882	polr1d	97	66.364	ENSRROG00000026751	-	83	66.364	Rhinopithecus_roxellana
ENSAPOG00000021882	polr1d	98	67.568	ENSRROG00000042232	-	83	67.568	Rhinopithecus_roxellana
ENSAPOG00000021882	polr1d	81	53.488	YNL113W	RPC19	67	49.474	Saccharomyces_cerevisiae
ENSAPOG00000021882	polr1d	98	67.568	ENSSBOG00000028482	-	83	67.568	Saimiri_boliviensis_boliviensis
ENSAPOG00000021882	polr1d	98	62.385	ENSSBOG00000030146	-	80	62.385	Saimiri_boliviensis_boliviensis
ENSAPOG00000021882	polr1d	96	72.549	ENSSHAG00000001190	POLR1D	84	70.642	Sarcophilus_harrisii
ENSAPOG00000021882	polr1d	96	77.670	ENSSFOG00015011375	polr1d	92	76.190	Scleropages_formosus
ENSAPOG00000021882	polr1d	96	85.294	ENSSMAG00000011861	polr1d	89	85.294	Scophthalmus_maximus
ENSAPOG00000021882	polr1d	96	85.294	ENSSDUG00000011930	polr1d	89	85.294	Seriola_dumerili
ENSAPOG00000021882	polr1d	100	85.849	ENSSLDG00000023871	polr1d	90	85.849	Seriola_lalandi_dorsalis
ENSAPOG00000021882	polr1d	98	67.568	ENSSARG00000007840	POLR1D	83	67.568	Sorex_araneus
ENSAPOG00000021882	polr1d	88	75.269	ENSSPUG00000005786	POLR1D	85	71.717	Sphenodon_punctatus
ENSAPOG00000021882	polr1d	96	91.176	ENSSPAG00000011764	polr1d	91	90.385	Stegastes_partitus
ENSAPOG00000021882	polr1d	94	69.000	ENSSSCG00000009310	POLR1D	76	68.317	Sus_scrofa
ENSAPOG00000021882	polr1d	84	80.899	ENSTGUG00000005450	POLR1D	95	79.121	Taeniopygia_guttata
ENSAPOG00000021882	polr1d	96	79.412	ENSTRUG00000019741	polr1d	89	79.412	Takifugu_rubripes
ENSAPOG00000021882	polr1d	98	67.568	ENSTBEG00000007006	POLR1D	90	67.568	Tupaia_belangeri
ENSAPOG00000021882	polr1d	98	67.568	ENSUAMG00000011413	POLR1D	83	67.568	Ursus_americanus
ENSAPOG00000021882	polr1d	98	67.568	ENSUMAG00000016968	POLR1D	87	67.568	Ursus_maritimus
ENSAPOG00000021882	polr1d	98	67.568	ENSVVUG00000009216	POLR1D	83	67.568	Vulpes_vulpes
ENSAPOG00000021882	polr1d	94	88.000	ENSXCOG00000011731	polr1d	77	88.000	Xiphophorus_couchianus
ENSAPOG00000021882	polr1d	94	89.000	ENSXMAG00000017538	polr1d	77	89.000	Xiphophorus_maculatus