EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPOG00000022087 (Gene tree)
Gene ID
110953100
Gene Symbol
cpsf3
Alias
si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name
cleavage and polyadenylation specificity factor subunit 3-like
Gene Type
protein_coding
Species
Acanthochromis_polyacanthus
Status
putative
Strand
Minus strand
Length
16848 bases
Position
chrMVNR01000277.1:333851-350698
Accession
110953100
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPOP00000033462CPSF73-100_CPF11718.88.6e-5311
ENSAPOP00000018691CPSF73-100_CPF11718.84.8e-3911
ENSAPOP00000018691Beta-CaspPF10996.87.2e-3411
ENSAPOP00000033462Beta-CaspPF10996.88.7e-3411
ENSAPOP00000033462Lactamase_BPF00753.272e-1811
ENSAPOP00000018691Lactamase_BPF00753.274.5e-0811
ENSAPOP00000018691RMMBLPF07521.121.5e-2111
ENSAPOP00000033462RMMBLPF07521.121.9e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPOT00000028356-1764-ENSAPOP00000018691587 (aa)--
ENSAPOT00000028383-6514XM_022196941ENSAPOP00000033462686 (aa)XP_022052633UPI000B8FA838
Gene Model
Click here to download ENSAPOG00000022087's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000022087's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPOG00000022087cpsf37794.222ENSAPOG00000012241CPSF39196.260
ENSAPOG00000022087cpsf36639.276ENSAPOG00000022656ints117439.690
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPOG00000022087cpsf39885.420ENSG00000119203CPSF310098.529Homo_sapiens
ENSAPOG00000022087cpsf39885.420ENSAMEG00000008493CPSF39985.420Ailuropoda_melanoleuca
ENSAPOG00000022087cpsf39991.376ENSACIG00000009846cpsf39591.376Amphilophus_citrinellus
ENSAPOG00000022087cpsf39986.258ENSACIG00000023663CPSF39586.258Amphilophus_citrinellus
ENSAPOG00000022087cpsf310098.980ENSAOCG00000022056cpsf310098.980Amphiprion_ocellaris
ENSAPOG00000022087cpsf39989.116ENSAOCG00000010077CPSF310087.971Amphiprion_ocellaris
ENSAPOG00000022087cpsf310087.971ENSAPEG00000021167CPSF310087.971Amphiprion_percula
ENSAPOG00000022087cpsf310099.125ENSAPEG00000019526cpsf310099.125Amphiprion_percula
ENSAPOG00000022087cpsf39984.593ENSATEG00000014525CPSF39984.593Anabas_testudineus
ENSAPOG00000022087cpsf39995.760ENSATEG00000003959cpsf39995.760Anabas_testudineus
ENSAPOG00000022087cpsf39785.522ENSAPLG00000006941CPSF39885.522Anas_platyrhynchos
ENSAPOG00000022087cpsf39881.910ENSACAG00000001759CPSF39982.808Anolis_carolinensis
ENSAPOG00000022087cpsf39880.412ENSANAG00000031254CPSF39980.781Aotus_nancymaae
ENSAPOG00000022087cpsf39795.619ENSACLG00000014484cpsf39995.619Astatotilapia_calliptera
ENSAPOG00000022087cpsf39986.258ENSACLG00000018846CPSF39986.328Astatotilapia_calliptera
ENSAPOG00000022087cpsf39988.964ENSAMXG00000004786cpsf39987.355Astyanax_mexicanus
ENSAPOG00000022087cpsf39885.420ENSBTAG00000019735CPSF39985.420Bos_taurus
ENSAPOG00000022087cpsf39058.349WBGene00013460cpsf-38957.413Caenorhabditis_elegans
ENSAPOG00000022087cpsf39885.272ENSCJAG00000006276CPSF39985.272Callithrix_jacchus
ENSAPOG00000022087cpsf39885.420ENSCAFG00000003375CPSF39585.420Canis_familiaris
ENSAPOG00000022087cpsf39188.827ENSCAFG00020026799CPSF39988.149Canis_lupus_dingo
ENSAPOG00000022087cpsf39885.420ENSCHIG00000013973CPSF39985.420Capra_hircus
ENSAPOG00000022087cpsf39885.420ENSTSYG00000002967CPSF39985.420Carlito_syrichta
ENSAPOG00000022087cpsf39685.564ENSCAPG00000013851CPSF39985.564Cavia_aperea
ENSAPOG00000022087cpsf39885.714ENSCPOG00000011299CPSF39985.714Cavia_porcellus
ENSAPOG00000022087cpsf39885.272ENSCCAG00000036730CPSF39985.272Cebus_capucinus
ENSAPOG00000022087cpsf39983.077ENSCATG00000014770CPSF39991.176Cercocebus_atys
ENSAPOG00000022087cpsf39885.714ENSCLAG00000002727CPSF39985.714Chinchilla_lanigera
ENSAPOG00000022087cpsf39877.467ENSCSAG00000007125CPSF39977.467Chlorocebus_sabaeus
ENSAPOG00000022087cpsf385100.000ENSCHOG00000000180CPSF38561.268Choloepus_hoffmanni
ENSAPOG00000022087cpsf39985.051ENSCPBG00000014074CPSF39985.051Chrysemys_picta_bellii
ENSAPOG00000022087cpsf39868.375ENSCING00000007214-9868.375Ciona_intestinalis
ENSAPOG00000022087cpsf39875.877ENSCANG00000034435CPSF39975.877Colobus_angolensis_palliatus
ENSAPOG00000022087cpsf39885.125ENSCGRG00001013134Cpsf39985.125Cricetulus_griseus_chok1gshd
ENSAPOG00000022087cpsf39885.125ENSCGRG00000018319Cpsf39985.125Cricetulus_griseus_crigri
ENSAPOG00000022087cpsf39987.083ENSCSEG00000002021CPSF39987.132Cynoglossus_semilaevis
ENSAPOG00000022087cpsf39988.372ENSCVAG00000015067CPSF39988.372Cyprinodon_variegatus
ENSAPOG00000022087cpsf310086.812ENSDARG00000027649cpsf310086.812Danio_rerio
ENSAPOG00000022087cpsf39884.435ENSDNOG00000008940CPSF39584.435Dasypus_novemcinctus
ENSAPOG00000022087cpsf39883.082ENSDORG00000014263Cpsf39986.728Dipodomys_ordii
ENSAPOG00000022087cpsf39966.862FBgn0261065Cpsf739966.862Drosophila_melanogaster
ENSAPOG00000022087cpsf39972.682ENSETEG00000003893CPSF39974.383Echinops_telfairi
ENSAPOG00000022087cpsf39975.282ENSEBUG00000009018cpsf39975.282Eptatretus_burgeri
ENSAPOG00000022087cpsf39885.420ENSEASG00005003970CPSF39985.420Equus_asinus_asinus
ENSAPOG00000022087cpsf39885.420ENSECAG00000019911CPSF39690.709Equus_caballus
ENSAPOG00000022087cpsf39870.735ENSEEUG00000015422CPSF39970.735Erinaceus_europaeus
ENSAPOG00000022087cpsf39990.421ENSELUG00000013775cpsf39990.421Esox_lucius
ENSAPOG00000022087cpsf39885.420ENSFCAG00000007852CPSF39985.420Felis_catus
ENSAPOG00000022087cpsf39982.450ENSFALG00000006572CPSF310085.008Ficedula_albicollis
ENSAPOG00000022087cpsf39885.125ENSFDAG00000006317CPSF39985.125Fukomys_damarensis
ENSAPOG00000022087cpsf35867.073ENSFHEG00000012186CPSF310067.073Fundulus_heteroclitus
ENSAPOG00000022087cpsf310093.732ENSFHEG00000014774cpsf310093.732Fundulus_heteroclitus
ENSAPOG00000022087cpsf310089.985ENSGMOG00000003157cpsf310089.985Gadus_morhua
ENSAPOG00000022087cpsf39985.486ENSGALG00000016424CPSF39985.486Gallus_gallus
ENSAPOG00000022087cpsf310088.696ENSGAFG00000008016CPSF310088.696Gambusia_affinis
ENSAPOG00000022087cpsf39991.376ENSGAFG00000019449cpsf39691.376Gambusia_affinis
ENSAPOG00000022087cpsf37179.452ENSGAGG00000025583CPSF39380.300Gopherus_agassizii
ENSAPOG00000022087cpsf39883.285ENSGGOG00000001757CPSF39196.774Gorilla_gorilla
ENSAPOG00000022087cpsf35981.030ENSHBUG00000014332CPSF310080.000Haplochromis_burtoni
ENSAPOG00000022087cpsf310095.481ENSHBUG00000001188cpsf310095.481Haplochromis_burtoni
ENSAPOG00000022087cpsf39885.567ENSHGLG00000000666CPSF39885.567Heterocephalus_glaber_female
ENSAPOG00000022087cpsf39885.567ENSHGLG00100007765CPSF39885.567Heterocephalus_glaber_male
ENSAPOG00000022087cpsf39992.251ENSHCOG00000007251cpsf39992.251Hippocampus_comes
ENSAPOG00000022087cpsf39986.773ENSHCOG00000015957CPSF39986.773Hippocampus_comes
ENSAPOG00000022087cpsf39988.227ENSIPUG00000023488cpsf39988.227Ictalurus_punctatus
ENSAPOG00000022087cpsf39885.125ENSSTOG00000004476CPSF39985.125Ictidomys_tridecemlineatus
ENSAPOG00000022087cpsf39984.751ENSJJAG00000023415Cpsf39984.751Jaculus_jaculus
ENSAPOG00000022087cpsf310094.315ENSKMAG00000002806cpsf310094.315Kryptolebias_marmoratus
ENSAPOG00000022087cpsf39987.791ENSKMAG00000007317CPSF39987.791Kryptolebias_marmoratus
ENSAPOG00000022087cpsf39986.131ENSLBEG00000020569cpsf39686.131Labrus_bergylta
ENSAPOG00000022087cpsf39688.889ENSLBEG00000013492CPSF39988.889Labrus_bergylta
ENSAPOG00000022087cpsf36088.108ENSLBEG00000015018-9988.978Labrus_bergylta
ENSAPOG00000022087cpsf39980.000ENSLACG00000008308CPSF39980.000Latimeria_chalumnae
ENSAPOG00000022087cpsf310088.312ENSLOCG00000016823cpsf310088.312Lepisosteus_oculatus
ENSAPOG00000022087cpsf39884.218ENSLAFG00000009467CPSF39984.218Loxodonta_africana
ENSAPOG00000022087cpsf39885.272ENSMFAG00000001339CPSF39493.750Macaca_fascicularis
ENSAPOG00000022087cpsf39982.119ENSMMUG00000018038CPSF39293.750Macaca_mulatta
ENSAPOG00000022087cpsf39096.800ENSMNEG00000039447CPSF39996.800Macaca_nemestrina
ENSAPOG00000022087cpsf39885.420ENSMLEG00000026825CPSF39296.767Mandrillus_leucophaeus
ENSAPOG00000022087cpsf39987.145ENSMAMG00000008835CPSF39587.145Mastacembelus_armatus
ENSAPOG00000022087cpsf310094.315ENSMAMG00000003076cpsf310094.315Mastacembelus_armatus
ENSAPOG00000022087cpsf310095.481ENSMZEG00005014358cpsf310095.481Maylandia_zebra
ENSAPOG00000022087cpsf310087.971ENSMZEG00005006258CPSF310087.971Maylandia_zebra
ENSAPOG00000022087cpsf39785.607ENSMGAG00000013995CPSF310085.607Meleagris_gallopavo
ENSAPOG00000022087cpsf35474.866ENSMAUG00000000166Cpsf39974.866Mesocricetus_auratus
ENSAPOG00000022087cpsf39880.617ENSMICG00000002363CPSF39980.617Microcebus_murinus
ENSAPOG00000022087cpsf39882.963ENSMOCG00000020067Cpsf39982.963Microtus_ochrogaster
ENSAPOG00000022087cpsf39985.593ENSMMOG00000018212CPSF39886.271Mola_mola
ENSAPOG00000022087cpsf37678.014ENSMMOG00000011923CPSF38477.143Mola_mola
ENSAPOG00000022087cpsf39883.819ENSMODG00000014703CPSF39983.819Monodelphis_domestica
ENSAPOG00000022087cpsf39286.856ENSMALG00000011474CPSF39983.780Monopterus_albus
ENSAPOG00000022087cpsf310095.627ENSMALG00000016416cpsf310095.627Monopterus_albus
ENSAPOG00000022087cpsf39885.420MGP_CAROLIEiJ_G0017640Cpsf39985.420Mus_caroli
ENSAPOG00000022087cpsf39885.420ENSMUSG00000054309Cpsf39697.034Mus_musculus
ENSAPOG00000022087cpsf39885.272MGP_PahariEiJ_G0029397Cpsf39985.272Mus_pahari
ENSAPOG00000022087cpsf39885.420MGP_SPRETEiJ_G0018481Cpsf39985.420Mus_spretus
ENSAPOG00000022087cpsf39885.441ENSMPUG00000013213CPSF39985.441Mustela_putorius_furo
ENSAPOG00000022087cpsf39885.441ENSMLUG00000010636CPSF39985.441Myotis_lucifugus
ENSAPOG00000022087cpsf39885.125ENSNGAG00000019836Cpsf39985.125Nannospalax_galili
ENSAPOG00000022087cpsf39986.258ENSNBRG00000010525CPSF39986.328Neolamprologus_brichardi
ENSAPOG00000022087cpsf310095.044ENSNBRG00000004770cpsf310095.044Neolamprologus_brichardi
ENSAPOG00000022087cpsf39885.272ENSNLEG00000013359CPSF39196.774Nomascus_leucogenys
ENSAPOG00000022087cpsf39855.228ENSMEUG00000013117-9955.376Notamacropus_eugenii
ENSAPOG00000022087cpsf39976.799ENSOPRG00000008902CPSF39976.799Ochotona_princeps
ENSAPOG00000022087cpsf39885.862ENSODEG00000003129CPSF39985.862Octodon_degus
ENSAPOG00000022087cpsf310095.190ENSONIG00000018812cpsf310095.190Oreochromis_niloticus
ENSAPOG00000022087cpsf38682.109ENSOANG00000008577CPSF39982.384Ornithorhynchus_anatinus
ENSAPOG00000022087cpsf39885.420ENSOCUG00000003728CPSF39985.420Oryctolagus_cuniculus
ENSAPOG00000022087cpsf310092.857ENSORLG00000018854cpsf310092.857Oryzias_latipes
ENSAPOG00000022087cpsf310093.003ENSORLG00020013331cpsf310093.003Oryzias_latipes_hni
ENSAPOG00000022087cpsf310092.857ENSORLG00015011017cpsf310092.857Oryzias_latipes_hsok
ENSAPOG00000022087cpsf310093.440ENSOMEG00000010647cpsf39693.440Oryzias_melastigma
ENSAPOG00000022087cpsf39875.552ENSOGAG00000001680CPSF39975.552Otolemur_garnettii
ENSAPOG00000022087cpsf39885.420ENSOARG00000015073CPSF39985.420Ovis_aries
ENSAPOG00000022087cpsf39885.420ENSPPAG00000042457CPSF39196.774Pan_paniscus
ENSAPOG00000022087cpsf39885.420ENSPPRG00000016790CPSF39985.567Panthera_pardus
ENSAPOG00000022087cpsf39885.546ENSPTIG00000003920CPSF39985.693Panthera_tigris_altaica
ENSAPOG00000022087cpsf39885.420ENSPTRG00000011638CPSF39196.774Pan_troglodytes
ENSAPOG00000022087cpsf39885.420ENSPANG00000016798CPSF39493.750Papio_anubis
ENSAPOG00000022087cpsf310088.551ENSPKIG00000023646cpsf310088.551Paramormyrops_kingsleyae
ENSAPOG00000022087cpsf39984.018ENSPSIG00000016144CPSF39984.018Pelodiscus_sinensis
ENSAPOG00000022087cpsf35980.163ENSPMGG00000015311CPSF310080.494Periophthalmus_magnuspinnatus
ENSAPOG00000022087cpsf39494.918ENSPMGG00000006141-9594.918Periophthalmus_magnuspinnatus
ENSAPOG00000022087cpsf39885.125ENSPEMG00000017668Cpsf39985.272Peromyscus_maniculatus_bairdii
ENSAPOG00000022087cpsf38287.190ENSPMAG00000004841cpsf39989.319Petromyzon_marinus
ENSAPOG00000022087cpsf39982.119ENSPCIG00000009823CPSF39885.583Phascolarctos_cinereus
ENSAPOG00000022087cpsf310088.406ENSPFOG00000010418-10088.406Poecilia_formosa
ENSAPOG00000022087cpsf310093.732ENSPFOG00000015922cpsf310093.732Poecilia_formosa
ENSAPOG00000022087cpsf35881.975ENSPLAG00000021300-10081.975Poecilia_latipinna
ENSAPOG00000022087cpsf310093.732ENSPLAG00000000882cpsf310093.732Poecilia_latipinna
ENSAPOG00000022087cpsf310093.878ENSPMEG00000018309cpsf310093.878Poecilia_mexicana
ENSAPOG00000022087cpsf310082.899ENSPREG00000004482CPSF310082.899Poecilia_reticulata
ENSAPOG00000022087cpsf39991.708ENSPREG00000014875cpsf39691.708Poecilia_reticulata
ENSAPOG00000022087cpsf39881.149ENSPPYG00000012666CPSF39981.149Pongo_abelii
ENSAPOG00000022087cpsf38565.160ENSPCAG00000015042CPSF38965.160Procavia_capensis
ENSAPOG00000022087cpsf38886.159ENSPCOG00000023016CPSF39986.159Propithecus_coquereli
ENSAPOG00000022087cpsf39885.441ENSPVAG00000005324CPSF39985.441Pteropus_vampyrus
ENSAPOG00000022087cpsf310095.481ENSPNYG00000004405cpsf310095.481Pundamilia_nyererei
ENSAPOG00000022087cpsf39491.486ENSPNYG00000021047CPSF39291.486Pundamilia_nyererei
ENSAPOG00000022087cpsf39987.936ENSPNAG00000023060cpsf39987.936Pygocentrus_nattereri
ENSAPOG00000022087cpsf39885.420ENSRNOG00000052418Cpsf39985.420Rattus_norvegicus
ENSAPOG00000022087cpsf39880.412ENSRBIG00000041615CPSF39981.240Rhinopithecus_bieti
ENSAPOG00000022087cpsf39885.420ENSRROG00000033792CPSF39985.420Rhinopithecus_roxellana
ENSAPOG00000022087cpsf39539.788YLR277CYSH19739.788Saccharomyces_cerevisiae
ENSAPOG00000022087cpsf39681.654ENSSBOG00000027263CPSF39781.654Saimiri_boliviensis_boliviensis
ENSAPOG00000022087cpsf39885.125ENSSHAG00000007024CPSF39985.125Sarcophilus_harrisii
ENSAPOG00000022087cpsf310087.971ENSSFOG00015002108cpsf310087.971Scleropages_formosus
ENSAPOG00000022087cpsf39688.128ENSSMAG00000020534CPSF39788.128Scophthalmus_maximus
ENSAPOG00000022087cpsf310087.971ENSSDUG00000018498CPSF310087.971Seriola_dumerili
ENSAPOG00000022087cpsf310095.773ENSSDUG00000002828cpsf39795.773Seriola_dumerili
ENSAPOG00000022087cpsf310087.971ENSSLDG00000005234CPSF310087.971Seriola_lalandi_dorsalis
ENSAPOG00000022087cpsf310095.773ENSSLDG00000008469cpsf39795.773Seriola_lalandi_dorsalis
ENSAPOG00000022087cpsf38883.051ENSSARG00000005186CPSF38983.051Sorex_araneus
ENSAPOG00000022087cpsf39684.155ENSSPUG00000015525CPSF39784.155Sphenodon_punctatus
ENSAPOG00000022087cpsf310088.116ENSSPAG00000002906CPSF310088.116Stegastes_partitus
ENSAPOG00000022087cpsf310098.397ENSSPAG00000018579cpsf310098.397Stegastes_partitus
ENSAPOG00000022087cpsf39885.420ENSSSCG00000020799CPSF39985.420Sus_scrofa
ENSAPOG00000022087cpsf39985.316ENSTGUG00000013016CPSF39985.316Taeniopygia_guttata
ENSAPOG00000022087cpsf35973.829ENSTRUG00000013905CPSF39973.086Takifugu_rubripes
ENSAPOG00000022087cpsf39992.409ENSTRUG00000007030cpsf39892.409Takifugu_rubripes
ENSAPOG00000022087cpsf38490.634ENSTBEG00000002707CPSF38490.634Tupaia_belangeri
ENSAPOG00000022087cpsf38673.479ENSTTRG00000000861CPSF38773.479Tursiops_truncatus
ENSAPOG00000022087cpsf39685.714ENSUAMG00000007535CPSF39585.714Ursus_americanus
ENSAPOG00000022087cpsf39983.932ENSUMAG00000003676CPSF39490.323Ursus_maritimus
ENSAPOG00000022087cpsf39982.285ENSVPAG00000008041CPSF310085.489Vicugna_pacos
ENSAPOG00000022087cpsf39885.420ENSVVUG00000002194CPSF39985.420Vulpes_vulpes
ENSAPOG00000022087cpsf39985.217ENSXETG00000008263cpsf39985.217Xenopus_tropicalis
ENSAPOG00000022087cpsf35480.108ENSXCOG00000000957-8780.108Xiphophorus_couchianus
ENSAPOG00000022087cpsf310093.149ENSXCOG00000019695cpsf310093.149Xiphophorus_couchianus
ENSAPOG00000022087cpsf310093.878ENSXMAG00000009784cpsf310093.878Xiphophorus_maculatus
ENSAPOG00000022087cpsf310088.551ENSXMAG00000027291CPSF310088.551Xiphophorus_maculatus

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