EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000022111 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 7737 bases
Position: chrMVNR01001255.1:117346-125082
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000033510	zf-C2H2	PF00096.26	3e-29	1	5
ENSAPOP00000033510	zf-C2H2	PF00096.26	3e-29	2	5
ENSAPOP00000033510	zf-C2H2	PF00096.26	3e-29	3	5
ENSAPOP00000033510	zf-C2H2	PF00096.26	3e-29	4	5
ENSAPOP00000033510	zf-C2H2	PF00096.26	3e-29	5	5
ENSAPOP00000033510	zf-met	PF12874.7	0.00046	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000034567	-	4348	-	ENSAPOP00000033510	899 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000022111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000022111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000022111	-	52	30.126	ENSAPOG00000006303	-	88	38.728
ENSAPOG00000022111	-	61	37.226	ENSAPOG00000008802	-	99	40.086
ENSAPOG00000022111	-	50	38.710	ENSAPOG00000004628	-	97	40.639
ENSAPOG00000022111	-	71	37.327	ENSAPOG00000010280	-	75	37.327
ENSAPOG00000022111	-	60	38.095	ENSAPOG00000005195	-	66	40.212
ENSAPOG00000022111	-	51	39.252	ENSAPOG00000007629	-	84	35.273
ENSAPOG00000022111	-	66	40.164	ENSAPOG00000001054	-	95	38.931
ENSAPOG00000022111	-	51	36.530	ENSAPOG00000020864	-	54	42.857
ENSAPOG00000022111	-	50	31.884	ENSAPOG00000022113	-	85	31.884
ENSAPOG00000022111	-	87	37.681	ENSAPOG00000003028	-	98	37.681
ENSAPOG00000022111	-	52	38.745	ENSAPOG00000021383	-	67	38.745
ENSAPOG00000022111	-	50	32.468	ENSAPOG00000011470	-	66	32.143
ENSAPOG00000022111	-	52	38.007	ENSAPOG00000005259	-	84	38.007
ENSAPOG00000022111	-	58	38.222	ENSAPOG00000021959	-	73	37.838
ENSAPOG00000022111	-	52	33.865	ENSAPOG00000001563	-	88	33.865
ENSAPOG00000022111	-	66	38.956	ENSAPOG00000022086	-	98	41.706
ENSAPOG00000022111	-	53	39.450	ENSAPOG00000021980	-	97	39.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000022111	-	52	31.694	ENSAOCG00000016897	-	68	31.694	Amphiprion_ocellaris
ENSAPOG00000022111	-	52	31.694	ENSAPEG00000001556	-	64	31.694	Amphiprion_percula
ENSAPOG00000022111	-	51	35.780	ENSATEG00000018931	-	89	34.956	Anabas_testudineus
ENSAPOG00000022111	-	85	33.032	ENSELUG00000001909	-	84	33.032	Esox_lucius
ENSAPOG00000022111	-	50	36.735	ENSHCOG00000013489	-	92	36.735	Hippocampus_comes
ENSAPOG00000022111	-	86	53.015	ENSLBEG00000017407	-	99	51.637	Labrus_bergylta
ENSAPOG00000022111	-	50	37.615	ENSLBEG00000001132	-	79	37.615	Labrus_bergylta
ENSAPOG00000022111	-	54	35.772	ENSLOCG00000004208	-	99	35.772	Lepisosteus_oculatus
ENSAPOG00000022111	-	50	32.275	ENSPFOG00000018860	-	100	32.275	Poecilia_formosa
ENSAPOG00000022111	-	50	36.207	ENSPLAG00000008941	-	79	36.207	Poecilia_latipinna
ENSAPOG00000022111	-	85	34.286	ENSSMAG00000013291	-	91	36.126	Scophthalmus_maximus