EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000022184 (Gene tree)
Gene ID: 110956580
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain-containing protein 2-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 4380 bases
Position: chrMVNR01000482.1:471143-475522
Accession: 110956580
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000018838	zf-C2H2	PF00096.26	3.9e-17	1	3
ENSAPOP00000018838	zf-C2H2	PF00096.26	3.9e-17	2	3
ENSAPOP00000018838	zf-C2H2	PF00096.26	3.9e-17	3	3
ENSAPOP00000018838	zf-met	PF12874.7	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000034590	-	1798	XM_022202172	ENSAPOP00000018838	386 (aa)	XP_022057864	UPI000B8F0D22

Gene Model

Click here to download ENSAPOG00000022184's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000022184's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000022184	-	77	50.000	ENSAPOG00000010200	-	56	50.000
ENSAPOG00000022184	-	59	45.000	ENSAPOG00000003028	-	82	40.909
ENSAPOG00000022184	-	59	38.793	ENSAPOG00000002525	ZNF319	81	38.793
ENSAPOG00000022184	-	67	46.774	ENSAPOG00000005187	-	54	46.774
ENSAPOG00000022184	-	97	39.823	ENSAPOG00000001563	-	70	42.735
ENSAPOG00000022184	-	66	52.273	ENSAPOG00000003666	-	97	42.241
ENSAPOG00000022184	-	61	51.389	ENSAPOG00000022234	-	97	51.389
ENSAPOG00000022184	-	71	43.529	ENSAPOG00000018480	-	63	49.231
ENSAPOG00000022184	-	90	50.000	ENSAPOG00000006303	-	87	47.009
ENSAPOG00000022184	-	97	43.103	ENSAPOG00000023496	-	98	43.103
ENSAPOG00000022184	-	67	43.243	ENSAPOG00000004628	-	99	41.935
ENSAPOG00000022184	-	74	46.957	ENSAPOG00000013125	-	71	46.957
ENSAPOG00000022184	-	54	43.443	ENSAPOG00000008386	-	83	43.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000022184	-	97	48.684	ENSACIG00000022738	-	88	48.101	Amphilophus_citrinellus
ENSAPOG00000022184	-	100	90.000	ENSAOCG00000022836	-	100	90.000	Amphiprion_ocellaris
ENSAPOG00000022184	-	97	48.980	ENSAOCG00000016409	-	60	48.980	Amphiprion_ocellaris
ENSAPOG00000022184	-	100	90.000	ENSAPEG00000003776	-	100	90.000	Amphiprion_percula
ENSAPOG00000022184	-	97	48.980	ENSAPEG00000008746	-	59	48.980	Amphiprion_percula
ENSAPOG00000022184	-	99	52.298	ENSATEG00000014684	-	86	87.395	Anabas_testudineus
ENSAPOG00000022184	-	99	48.684	ENSACLG00000015462	-	61	48.684	Astatotilapia_calliptera
ENSAPOG00000022184	-	57	45.098	ENSACLG00000014365	-	90	45.098	Astatotilapia_calliptera
ENSAPOG00000022184	-	100	54.327	ENSGAFG00000018506	-	100	54.699	Gambusia_affinis
ENSAPOG00000022184	-	99	48.684	ENSHBUG00000019377	-	61	48.684	Haplochromis_burtoni
ENSAPOG00000022184	-	99	46.491	ENSKMAG00000015304	-	61	46.491	Kryptolebias_marmoratus
ENSAPOG00000022184	-	100	56.738	ENSKMAG00000000427	-	98	57.110	Kryptolebias_marmoratus
ENSAPOG00000022184	-	61	76.389	ENSLBEG00000026457	-	96	79.508	Labrus_bergylta
ENSAPOG00000022184	-	99	52.268	ENSLBEG00000026060	-	99	52.268	Labrus_bergylta
ENSAPOG00000022184	-	61	51.195	ENSLBEG00000009663	-	92	51.195	Labrus_bergylta
ENSAPOG00000022184	-	50	49.438	ENSMAMG00000002083	-	92	48.000	Mastacembelus_armatus
ENSAPOG00000022184	-	97	48.980	ENSMAMG00000010902	-	58	48.980	Mastacembelus_armatus
ENSAPOG00000022184	-	99	48.684	ENSMZEG00005018502	-	61	48.684	Maylandia_zebra
ENSAPOG00000022184	-	99	51.020	ENSMMOG00000009252	-	64	51.020	Mola_mola
ENSAPOG00000022184	-	99	48.684	ENSNBRG00000024179	-	76	48.684	Neolamprologus_brichardi
ENSAPOG00000022184	-	98	44.737	ENSPFOG00000000667	-	60	44.737	Poecilia_formosa
ENSAPOG00000022184	-	99	44.737	ENSPLAG00000013745	-	99	44.737	Poecilia_latipinna
ENSAPOG00000022184	-	99	54.458	ENSPLAG00000011958	-	99	55.583	Poecilia_latipinna
ENSAPOG00000022184	-	99	54.237	ENSPMEG00000006760	-	99	54.831	Poecilia_mexicana
ENSAPOG00000022184	-	100	53.810	ENSPREG00000021124	-	100	55.048	Poecilia_reticulata
ENSAPOG00000022184	-	97	41.146	ENSPNAG00000019887	-	50	72.222	Pygocentrus_nattereri
ENSAPOG00000022184	-	77	46.018	ENSPNAG00000011660	-	51	46.018	Pygocentrus_nattereri
ENSAPOG00000022184	-	99	48.980	ENSSMAG00000013828	-	60	48.980	Scophthalmus_maximus
ENSAPOG00000022184	-	59	53.659	ENSSMAG00000013663	-	98	48.864	Scophthalmus_maximus
ENSAPOG00000022184	-	78	65.350	ENSSPAG00000008950	-	79	66.261	Stegastes_partitus
ENSAPOG00000022184	-	66	30.196	ENSXCOG00000013306	-	95	31.868	Xiphophorus_couchianus
ENSAPOG00000022184	-	53	56.398	ENSXMAG00000022894	-	77	56.398	Xiphophorus_maculatus