EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000023496 (Gene tree)
Gene ID: 110962404
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 239-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 6863 bases
Position: chrMVNR01001017.1:259884-266746
Accession: 110962404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000019979	zf-C2H2	PF00096.26	1e-15	1	4
ENSAPOP00000019979	zf-C2H2	PF00096.26	1e-15	2	4
ENSAPOP00000019979	zf-C2H2	PF00096.26	1e-15	3	4
ENSAPOP00000019979	zf-C2H2	PF00096.26	1e-15	4	4
ENSAPOP00000019979	zf-met	PF12874.7	4.9e-06	1	2
ENSAPOP00000019979	zf-met	PF12874.7	4.9e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000030006	-	5796	XM_022210357	ENSAPOP00000019979	464 (aa)	XP_022066049	UPI000B900FC4

Gene Model

Click here to download ENSAPOG00000023496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000023496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000023496	-	52	40.000	ENSAPOG00000018586	-	76	40.000
ENSAPOG00000023496	-	53	36.585	ENSAPOG00000001054	-	92	43.590
ENSAPOG00000023496	-	67	43.678	ENSAPOG00000005259	-	83	37.931
ENSAPOG00000023496	-	52	33.074	ENSAPOG00000022273	-	60	36.957
ENSAPOG00000023496	-	50	46.154	ENSAPOG00000003028	-	58	36.879
ENSAPOG00000023496	-	52	46.067	ENSAPOG00000022234	-	85	46.067
ENSAPOG00000023496	-	53	39.333	ENSAPOG00000003666	-	97	39.333
ENSAPOG00000023496	-	98	43.103	ENSAPOG00000022184	-	97	43.103
ENSAPOG00000023496	-	52	36.364	ENSAPOG00000013499	-	77	39.716
ENSAPOG00000023496	-	50	37.195	ENSAPOG00000006303	-	94	41.844
ENSAPOG00000023496	-	64	39.130	ENSAPOG00000022007	-	58	39.130
ENSAPOG00000023496	-	55	32.749	ENSAPOG00000022174	-	84	42.857
ENSAPOG00000023496	-	59	39.394	ENSAPOG00000004628	-	93	50.769
ENSAPOG00000023496	-	62	32.240	ENSAPOG00000011470	-	65	36.170

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000023496	-	100	94.635	ENSAOCG00000000156	-	100	94.635	Amphiprion_ocellaris
ENSAPOG00000023496	-	100	95.054	ENSAPEG00000006979	-	100	95.699	Amphiprion_percula
ENSAPOG00000023496	-	96	63.516	ENSPREG00000004905	-	97	63.956	Poecilia_reticulata