EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000024177 (Gene tree)
Gene ID: 110956468
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 8971 bases
Position: chrMVNR01000019.1:537794-546764
Accession: 110956468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000020548	PRP4	PF08799.11	2.7e-13	1	1
ENSAPOP00000020563	PRP4	PF08799.11	2.8e-13	1	1
ENSAPOP00000020586	PRP4	PF08799.11	2.9e-13	1	1
ENSAPOP00000020563	Prp18	PF02840.15	1.5e-62	1	1
ENSAPOP00000020586	Prp18	PF02840.15	1.5e-62	1	1
ENSAPOP00000020548	Prp18	PF02840.15	4e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000030738	-	2025	XM_022201991	ENSAPOP00000020563	341 (aa)	XP_022057683	UPI000B8F3512
ENSAPOT00000030711	-	1008	-	ENSAPOP00000020548	335 (aa)	-	-
ENSAPOT00000030762	-	2052	XM_022201973	ENSAPOP00000020586	350 (aa)	XP_022057665	UPI000B8FDBEC

Gene Model

Click here to download ENSAPOG00000024177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000024177's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000024177	prpf18	100	85.673	ENSG00000165630	PRPF18	100	85.673	Homo_sapiens
ENSAPOG00000024177	prpf18	100	85.088	ENSAMEG00000013591	-	100	85.088	Ailuropoda_melanoleuca
ENSAPOG00000024177	prpf18	100	95.894	ENSACIG00000001186	prpf18	100	95.894	Amphilophus_citrinellus
ENSAPOG00000024177	prpf18	98	99.401	ENSAOCG00000006572	prpf18	94	99.123	Amphiprion_ocellaris
ENSAPOG00000024177	prpf18	100	99.413	ENSAPEG00000004564	prpf18	100	99.413	Amphiprion_percula
ENSAPOG00000024177	prpf18	100	97.067	ENSATEG00000000303	prpf18	100	97.067	Anabas_testudineus
ENSAPOG00000024177	prpf18	99	83.529	ENSAPLG00000003387	-	99	83.529	Anas_platyrhynchos
ENSAPOG00000024177	prpf18	100	85.465	ENSACAG00000000818	-	100	85.465	Anolis_carolinensis
ENSAPOG00000024177	prpf18	100	85.673	ENSANAG00000037445	-	100	85.673	Aotus_nancymaae
ENSAPOG00000024177	prpf18	100	94.721	ENSACLG00000026296	prpf18	100	94.721	Astatotilapia_calliptera
ENSAPOG00000024177	prpf18	100	90.286	ENSAMXG00000012848	prpf18	100	90.286	Astyanax_mexicanus
ENSAPOG00000024177	prpf18	100	84.795	ENSBTAG00000017244	PRPF18	100	84.795	Bos_taurus
ENSAPOG00000024177	prpf18	98	40.230	WBGene00009320	F32B6.3	97	39.548	Caenorhabditis_elegans
ENSAPOG00000024177	prpf18	100	85.673	ENSCJAG00000009432	-	100	85.673	Callithrix_jacchus
ENSAPOG00000024177	prpf18	100	85.088	ENSCAFG00000004735	-	100	85.088	Canis_familiaris
ENSAPOG00000024177	prpf18	100	85.088	ENSCAFG00020007712	-	100	85.088	Canis_lupus_dingo
ENSAPOG00000024177	prpf18	100	84.795	ENSCHIG00000000499	-	100	84.795	Capra_hircus
ENSAPOG00000024177	prpf18	100	85.088	ENSTSYG00000003517	-	100	85.088	Carlito_syrichta
ENSAPOG00000024177	prpf18	100	85.673	ENSCPOG00000021069	-	100	85.673	Cavia_porcellus
ENSAPOG00000024177	prpf18	100	85.673	ENSCCAG00000036822	-	100	85.673	Cebus_capucinus
ENSAPOG00000024177	prpf18	100	74.854	ENSCATG00000016633	-	100	74.854	Cercocebus_atys
ENSAPOG00000024177	prpf18	100	85.088	ENSCLAG00000011770	-	100	85.088	Chinchilla_lanigera
ENSAPOG00000024177	prpf18	100	84.046	ENSCSAG00000013109	-	100	84.046	Chlorocebus_sabaeus
ENSAPOG00000024177	prpf18	100	81.180	ENSCPBG00000003100	-	100	82.022	Chrysemys_picta_bellii
ENSAPOG00000024177	prpf18	99	56.176	ENSCING00000020481	-	97	56.176	Ciona_intestinalis
ENSAPOG00000024177	prpf18	99	55.977	ENSCSAVG00000010546	-	99	55.685	Ciona_savignyi
ENSAPOG00000024177	prpf18	100	85.673	ENSCANG00000034900	-	100	85.673	Colobus_angolensis_palliatus
ENSAPOG00000024177	prpf18	100	85.088	ENSCGRG00001023665	Prpf18	100	85.088	Cricetulus_griseus_chok1gshd
ENSAPOG00000024177	prpf18	100	85.088	ENSCGRG00000014690	Prpf18	100	85.088	Cricetulus_griseus_crigri
ENSAPOG00000024177	prpf18	100	92.669	ENSCSEG00000005536	prpf18	99	92.669	Cynoglossus_semilaevis
ENSAPOG00000024177	prpf18	100	94.135	ENSCVAG00000012401	prpf18	100	94.135	Cyprinodon_variegatus
ENSAPOG00000024177	prpf18	100	90.936	ENSDARG00000058306	prpf18	100	90.936	Danio_rerio
ENSAPOG00000024177	prpf18	100	85.380	ENSDNOG00000035607	-	100	85.380	Dasypus_novemcinctus
ENSAPOG00000024177	prpf18	100	84.795	ENSDORG00000000858	Prpf18	100	84.795	Dipodomys_ordii
ENSAPOG00000024177	prpf18	99	53.890	FBgn0027784	Prp18	98	52.738	Drosophila_melanogaster
ENSAPOG00000024177	prpf18	100	76.316	ENSETEG00000015060	-	100	76.316	Echinops_telfairi
ENSAPOG00000024177	prpf18	100	69.452	ENSEBUG00000016502	prpf18	99	68.588	Eptatretus_burgeri
ENSAPOG00000024177	prpf18	100	85.380	ENSEASG00005019373	-	100	85.380	Equus_asinus_asinus
ENSAPOG00000024177	prpf18	100	85.380	ENSECAG00000006997	PRPF18	100	85.380	Equus_caballus
ENSAPOG00000024177	prpf18	92	51.582	ENSEEUG00000001171	-	100	51.582	Erinaceus_europaeus
ENSAPOG00000024177	prpf18	100	89.504	ENSELUG00000022190	prpf18	100	89.504	Esox_lucius
ENSAPOG00000024177	prpf18	100	84.795	ENSFCAG00000004436	-	100	84.795	Felis_catus
ENSAPOG00000024177	prpf18	93	80.923	ENSFALG00000001912	-	97	81.231	Ficedula_albicollis
ENSAPOG00000024177	prpf18	94	87.500	ENSFDAG00000014026	-	100	87.500	Fukomys_damarensis
ENSAPOG00000024177	prpf18	99	57.971	ENSFDAG00000010713	-	97	57.971	Fukomys_damarensis
ENSAPOG00000024177	prpf18	80	94.872	ENSFHEG00000020125	prpf18	98	94.757	Fundulus_heteroclitus
ENSAPOG00000024177	prpf18	99	87.941	ENSGMOG00000012210	prpf18	99	87.941	Gadus_morhua
ENSAPOG00000024177	prpf18	100	84.503	ENSGALG00000043593	-	100	84.503	Gallus_gallus
ENSAPOG00000024177	prpf18	100	92.962	ENSGAFG00000006034	prpf18	100	92.962	Gambusia_affinis
ENSAPOG00000024177	prpf18	100	91.789	ENSGACG00000012232	prpf18	100	91.789	Gasterosteus_aculeatus
ENSAPOG00000024177	prpf18	100	85.088	ENSGAGG00000016878	-	100	85.088	Gopherus_agassizii
ENSAPOG00000024177	prpf18	92	84.494	ENSGGOG00000025188	-	96	84.494	Gorilla_gorilla
ENSAPOG00000024177	prpf18	100	94.857	ENSHBUG00000010264	prpf18	100	94.857	Haplochromis_burtoni
ENSAPOG00000024177	prpf18	100	85.088	ENSHGLG00000018534	PRPF18	100	85.088	Heterocephalus_glaber_female
ENSAPOG00000024177	prpf18	94	87.188	ENSHGLG00100012161	-	98	87.188	Heterocephalus_glaber_male
ENSAPOG00000024177	prpf18	100	96.481	ENSHCOG00000015987	prpf18	100	96.481	Hippocampus_comes
ENSAPOG00000024177	prpf18	100	83.853	ENSIPUG00000007432	prpf18	100	83.853	Ictalurus_punctatus
ENSAPOG00000024177	prpf18	100	84.795	ENSSTOG00000008735	-	100	84.795	Ictidomys_tridecemlineatus
ENSAPOG00000024177	prpf18	100	85.673	ENSJJAG00000024041	-	100	85.673	Jaculus_jaculus
ENSAPOG00000024177	prpf18	100	63.609	ENSJJAG00000015191	-	100	63.609	Jaculus_jaculus
ENSAPOG00000024177	prpf18	100	93.255	ENSKMAG00000012124	prpf18	100	93.255	Kryptolebias_marmoratus
ENSAPOG00000024177	prpf18	98	91.071	ENSLBEG00000028466	prpf18	99	91.071	Labrus_bergylta
ENSAPOG00000024177	prpf18	100	84.795	ENSLACG00000009885	prpf18	100	85.088	Latimeria_chalumnae
ENSAPOG00000024177	prpf18	100	88.889	ENSLOCG00000016736	prpf18	100	88.889	Lepisosteus_oculatus
ENSAPOG00000024177	prpf18	100	85.673	ENSLAFG00000007753	-	100	85.673	Loxodonta_africana
ENSAPOG00000024177	prpf18	100	85.673	ENSMFAG00000000540	-	100	85.673	Macaca_fascicularis
ENSAPOG00000024177	prpf18	100	85.673	ENSMMUG00000015071	PRPF18	93	92.715	Macaca_mulatta
ENSAPOG00000024177	prpf18	100	85.673	ENSMNEG00000024679	-	100	85.673	Macaca_nemestrina
ENSAPOG00000024177	prpf18	100	70.468	ENSMLEG00000031715	-	100	70.468	Mandrillus_leucophaeus
ENSAPOG00000024177	prpf18	100	95.429	ENSMAMG00000006610	prpf18	100	95.429	Mastacembelus_armatus
ENSAPOG00000024177	prpf18	100	94.857	ENSMZEG00005019392	prpf18	100	94.857	Maylandia_zebra
ENSAPOG00000024177	prpf18	100	84.503	ENSMGAG00000005023	-	100	84.503	Meleagris_gallopavo
ENSAPOG00000024177	prpf18	100	85.965	ENSMICG00000006572	-	100	85.965	Microcebus_murinus
ENSAPOG00000024177	prpf18	100	85.673	ENSMOCG00000021468	Prpf18	100	85.673	Microtus_ochrogaster
ENSAPOG00000024177	prpf18	100	94.135	ENSMMOG00000013012	prpf18	100	94.135	Mola_mola
ENSAPOG00000024177	prpf18	96	80.178	ENSMODG00000016902	-	92	80.178	Monodelphis_domestica
ENSAPOG00000024177	prpf18	100	77.485	ENSMODG00000024043	-	100	77.485	Monodelphis_domestica
ENSAPOG00000024177	prpf18	100	87.500	ENSMALG00000005486	prpf18	100	87.500	Monopterus_albus
ENSAPOG00000024177	prpf18	100	85.088	MGP_CAROLIEiJ_G0023143	Prpf18	100	95.890	Mus_caroli
ENSAPOG00000024177	prpf18	100	85.380	ENSMUSG00000039449	Prpf18	100	95.890	Mus_musculus
ENSAPOG00000024177	prpf18	100	85.380	MGP_PahariEiJ_G0019203	Prpf18	100	95.890	Mus_pahari
ENSAPOG00000024177	prpf18	100	85.088	MGP_SPRETEiJ_G0024061	Prpf18	100	95.890	Mus_spretus
ENSAPOG00000024177	prpf18	100	84.795	ENSMPUG00000000938	-	100	84.795	Mustela_putorius_furo
ENSAPOG00000024177	prpf18	100	84.795	ENSMLUG00000009200	-	100	84.795	Myotis_lucifugus
ENSAPOG00000024177	prpf18	68	82.759	ENSNGAG00000023550	-	82	83.478	Nannospalax_galili
ENSAPOG00000024177	prpf18	100	85.673	ENSNGAG00000012500	-	100	85.673	Nannospalax_galili
ENSAPOG00000024177	prpf18	100	95.015	ENSNBRG00000001778	prpf18	100	95.015	Neolamprologus_brichardi
ENSAPOG00000024177	prpf18	100	85.673	ENSNLEG00000012186	-	100	85.673	Nomascus_leucogenys
ENSAPOG00000024177	prpf18	76	73.359	ENSMEUG00000005032	-	75	71.815	Notamacropus_eugenii
ENSAPOG00000024177	prpf18	77	66.038	ENSOPRG00000002153	-	100	66.038	Ochotona_princeps
ENSAPOG00000024177	prpf18	100	84.795	ENSODEG00000003770	-	100	84.795	Octodon_degus
ENSAPOG00000024177	prpf18	98	94.311	ENSONIG00000014854	prpf18	96	94.311	Oreochromis_niloticus
ENSAPOG00000024177	prpf18	100	85.088	ENSOANG00000015404	-	100	85.088	Ornithorhynchus_anatinus
ENSAPOG00000024177	prpf18	100	85.380	ENSOCUG00000027756	-	96	86.239	Oryctolagus_cuniculus
ENSAPOG00000024177	prpf18	100	93.429	ENSORLG00000010293	prpf18	100	93.429	Oryzias_latipes
ENSAPOG00000024177	prpf18	100	93.548	ENSORLG00020001530	prpf18	100	93.548	Oryzias_latipes_hni
ENSAPOG00000024177	prpf18	100	93.255	ENSORLG00015013705	prpf18	100	93.255	Oryzias_latipes_hsok
ENSAPOG00000024177	prpf18	100	95.894	ENSOMEG00000009167	prpf18	100	95.894	Oryzias_melastigma
ENSAPOG00000024177	prpf18	100	84.795	ENSOGAG00000007294	-	100	84.795	Otolemur_garnettii
ENSAPOG00000024177	prpf18	100	83.191	ENSOARG00000006243	-	100	83.191	Ovis_aries
ENSAPOG00000024177	prpf18	100	85.673	ENSPPAG00000041959	-	100	85.673	Pan_paniscus
ENSAPOG00000024177	prpf18	100	84.795	ENSPPRG00000000107	-	100	84.795	Panthera_pardus
ENSAPOG00000024177	prpf18	100	84.795	ENSPTIG00000021094	-	100	84.795	Panthera_tigris_altaica
ENSAPOG00000024177	prpf18	100	85.673	ENSPTRG00000002306	PRPF18	100	85.673	Pan_troglodytes
ENSAPOG00000024177	prpf18	100	85.380	ENSPANG00000023346	-	100	85.380	Papio_anubis
ENSAPOG00000024177	prpf18	100	87.749	ENSPKIG00000014128	prpf18	96	87.749	Paramormyrops_kingsleyae
ENSAPOG00000024177	prpf18	100	85.088	ENSPSIG00000016064	-	100	85.088	Pelodiscus_sinensis
ENSAPOG00000024177	prpf18	100	89.911	ENSPMGG00000016486	prpf18	100	89.911	Periophthalmus_magnuspinnatus
ENSAPOG00000024177	prpf18	100	85.380	ENSPEMG00000013704	Prpf18	100	85.380	Peromyscus_maniculatus_bairdii
ENSAPOG00000024177	prpf18	100	74.640	ENSPMAG00000000204	prpf18	100	74.640	Petromyzon_marinus
ENSAPOG00000024177	prpf18	92	84.494	ENSPCIG00000012963	-	99	84.494	Phascolarctos_cinereus
ENSAPOG00000024177	prpf18	100	92.286	ENSPFOG00000017611	prpf18	100	92.286	Poecilia_formosa
ENSAPOG00000024177	prpf18	100	92.669	ENSPLAG00000000369	prpf18	100	92.669	Poecilia_latipinna
ENSAPOG00000024177	prpf18	100	92.962	ENSPMEG00000005183	prpf18	100	92.962	Poecilia_mexicana
ENSAPOG00000024177	prpf18	100	92.082	ENSPREG00000015232	prpf18	100	92.082	Poecilia_reticulata
ENSAPOG00000024177	prpf18	100	85.380	ENSPPYG00000002101	PRPF18	100	85.380	Pongo_abelii
ENSAPOG00000024177	prpf18	100	67.836	ENSPCAG00000010833	-	100	67.836	Procavia_capensis
ENSAPOG00000024177	prpf18	100	80.409	ENSPCOG00000013057	-	100	80.409	Propithecus_coquereli
ENSAPOG00000024177	prpf18	100	51.754	ENSPVAG00000002947	-	100	51.754	Pteropus_vampyrus
ENSAPOG00000024177	prpf18	100	94.571	ENSPNYG00000003554	prpf18	100	94.571	Pundamilia_nyererei
ENSAPOG00000024177	prpf18	100	89.459	ENSPNAG00000023151	prpf18	100	89.459	Pygocentrus_nattereri
ENSAPOG00000024177	prpf18	100	85.088	ENSRNOG00000018396	Prpf18	100	85.088	Rattus_norvegicus
ENSAPOG00000024177	prpf18	100	85.965	ENSRBIG00000028028	-	100	85.965	Rhinopithecus_bieti
ENSAPOG00000024177	prpf18	100	85.673	ENSRROG00000040695	-	100	85.673	Rhinopithecus_roxellana
ENSAPOG00000024177	prpf18	100	85.673	ENSSBOG00000034482	-	100	85.673	Saimiri_boliviensis_boliviensis
ENSAPOG00000024177	prpf18	100	85.380	ENSSHAG00000016463	-	100	85.380	Sarcophilus_harrisii
ENSAPOG00000024177	prpf18	100	71.345	ENSSHAG00000009669	-	100	71.345	Sarcophilus_harrisii
ENSAPOG00000024177	prpf18	98	86.377	ENSSFOG00015022118	prpf18	100	82.749	Scleropages_formosus
ENSAPOG00000024177	prpf18	77	45.455	ENSSFOG00015021154	-	89	49.561	Scleropages_formosus
ENSAPOG00000024177	prpf18	100	92.857	ENSSMAG00000005308	prpf18	100	92.857	Scophthalmus_maximus
ENSAPOG00000024177	prpf18	100	98.286	ENSSDUG00000015428	prpf18	100	98.286	Seriola_dumerili
ENSAPOG00000024177	prpf18	100	98.000	ENSSLDG00000023989	prpf18	100	98.000	Seriola_lalandi_dorsalis
ENSAPOG00000024177	prpf18	100	56.725	ENSSARG00000005307	-	100	56.725	Sorex_araneus
ENSAPOG00000024177	prpf18	100	85.088	ENSSPUG00000002619	-	100	85.088	Sphenodon_punctatus
ENSAPOG00000024177	prpf18	100	98.286	ENSSPAG00000019502	prpf18	100	98.286	Stegastes_partitus
ENSAPOG00000024177	prpf18	100	85.088	ENSSSCG00000026354	-	100	85.088	Sus_scrofa
ENSAPOG00000024177	prpf18	100	84.211	ENSTGUG00000002286	-	100	84.211	Taeniopygia_guttata
ENSAPOG00000024177	prpf18	100	90.323	ENSTRUG00000011278	prpf18	100	90.323	Takifugu_rubripes
ENSAPOG00000024177	prpf18	100	90.909	ENSTNIG00000000911	prpf18	100	90.909	Tetraodon_nigroviridis
ENSAPOG00000024177	prpf18	79	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSAPOG00000024177	prpf18	100	85.965	ENSTTRG00000011117	PRPF18	100	85.965	Tursiops_truncatus
ENSAPOG00000024177	prpf18	91	87.781	ENSUAMG00000001815	-	93	87.781	Ursus_americanus
ENSAPOG00000024177	prpf18	100	80.409	ENSUMAG00000012329	-	100	80.409	Ursus_maritimus
ENSAPOG00000024177	prpf18	100	79.532	ENSVPAG00000011486	-	100	79.532	Vicugna_pacos
ENSAPOG00000024177	prpf18	100	85.088	ENSVVUG00000005453	-	100	85.088	Vulpes_vulpes
ENSAPOG00000024177	prpf18	100	76.522	ENSXETG00000024057	prpf18	100	76.812	Xenopus_tropicalis
ENSAPOG00000024177	prpf18	100	92.711	ENSXCOG00000020414	prpf18	100	92.711	Xiphophorus_couchianus
ENSAPOG00000024177	prpf18	100	93.255	ENSXMAG00000004713	prpf18	91	93.255	Xiphophorus_maculatus