EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000024356 (Gene tree)
Gene ID: 110955381
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 7951 bases
Position: chrMVNR01000401.1:161039-168989
Accession: 110955381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000034825	RNA_pol_A_bac	PF01000.26	3.3e-31	1	1
ENSAPOP00000034825	RNA_pol_L	PF01193.24	9e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000030963	-	1694	XM_022200347	ENSAPOP00000034825	351 (aa)	XP_022056039	UPI000B9086B9

Gene Model

Click here to download ENSAPOG00000024356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000024356's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000024356	polr1c	100	73.219	ENSG00000171453	POLR1C	100	74.237	Homo_sapiens
ENSAPOG00000024356	polr1c	99	73.639	ENSAMEG00000012205	POLR1C	99	73.352	Ailuropoda_melanoleuca
ENSAPOG00000024356	polr1c	93	78.354	ENSACIG00000016268	polr1c	90	78.354	Amphilophus_citrinellus
ENSAPOG00000024356	polr1c	100	96.011	ENSAOCG00000011687	polr1c	97	96.011	Amphiprion_ocellaris
ENSAPOG00000024356	polr1c	100	96.581	ENSAPEG00000002433	polr1c	100	96.581	Amphiprion_percula
ENSAPOG00000024356	polr1c	99	89.971	ENSATEG00000005985	polr1c	99	89.971	Anabas_testudineus
ENSAPOG00000024356	polr1c	83	73.793	ENSAPLG00000002908	POLR1C	100	70.724	Anas_platyrhynchos
ENSAPOG00000024356	polr1c	89	71.565	ENSACAG00000009764	POLR1C	88	71.246	Anolis_carolinensis
ENSAPOG00000024356	polr1c	100	73.219	ENSANAG00000025805	POLR1C	99	72.934	Aotus_nancymaae
ENSAPOG00000024356	polr1c	58	30.476	ENSACLG00000004854	polr2c	83	30.476	Astatotilapia_calliptera
ENSAPOG00000024356	polr1c	100	89.744	ENSACLG00000006573	polr1c	100	89.744	Astatotilapia_calliptera
ENSAPOG00000024356	polr1c	100	82.336	ENSAMXG00000012062	polr1c	99	81.766	Astyanax_mexicanus
ENSAPOG00000024356	polr1c	99	73.926	ENSBTAG00000018969	POLR1C	99	73.639	Bos_taurus
ENSAPOG00000024356	polr1c	92	47.633	WBGene00019275	rpac-40	92	47.041	Caenorhabditis_elegans
ENSAPOG00000024356	polr1c	100	72.650	ENSCJAG00000005594	POLR1C	100	72.365	Callithrix_jacchus
ENSAPOG00000024356	polr1c	99	73.352	ENSCAFG00000001872	POLR1C	99	73.066	Canis_familiaris
ENSAPOG00000024356	polr1c	99	73.352	ENSCAFG00020012018	POLR1C	99	73.066	Canis_lupus_dingo
ENSAPOG00000024356	polr1c	62	30.531	ENSCAFG00020007660	POLR2C	62	30.531	Canis_lupus_dingo
ENSAPOG00000024356	polr1c	99	73.926	ENSCHIG00000004352	POLR1C	99	73.352	Capra_hircus
ENSAPOG00000024356	polr1c	99	73.352	ENSTSYG00000011921	POLR1C	99	73.066	Carlito_syrichta
ENSAPOG00000024356	polr1c	86	74.503	ENSCAPG00000015364	POLR1C	87	74.172	Cavia_aperea
ENSAPOG00000024356	polr1c	100	74.074	ENSCPOG00000038098	POLR1C	100	73.789	Cavia_porcellus
ENSAPOG00000024356	polr1c	99	72.779	ENSCCAG00000020169	POLR1C	99	72.493	Cebus_capucinus
ENSAPOG00000024356	polr1c	100	73.219	ENSCATG00000044045	POLR1C	100	72.934	Cercocebus_atys
ENSAPOG00000024356	polr1c	62	30.531	ENSCLAG00000013676	POLR2C	54	30.531	Chinchilla_lanigera
ENSAPOG00000024356	polr1c	100	74.074	ENSCLAG00000009266	POLR1C	100	73.789	Chinchilla_lanigera
ENSAPOG00000024356	polr1c	100	72.650	ENSCSAG00000011913	POLR1C	100	72.365	Chlorocebus_sabaeus
ENSAPOG00000024356	polr1c	60	70.755	ENSCHOG00000006601	POLR1C	100	70.755	Choloepus_hoffmanni
ENSAPOG00000024356	polr1c	99	73.926	ENSCPBG00000025203	POLR1C	99	73.639	Chrysemys_picta_bellii
ENSAPOG00000024356	polr1c	75	30.000	ENSCPBG00000022758	POLR2C	85	30.000	Chrysemys_picta_bellii
ENSAPOG00000024356	polr1c	83	30.100	ENSCING00000021895	-	97	30.435	Ciona_intestinalis
ENSAPOG00000024356	polr1c	99	55.014	ENSCING00000003563	-	99	55.014	Ciona_intestinalis
ENSAPOG00000024356	polr1c	100	73.219	ENSCANG00000043167	POLR1C	100	72.934	Colobus_angolensis_palliatus
ENSAPOG00000024356	polr1c	99	72.779	ENSCGRG00001017533	Polr1c	99	72.206	Cricetulus_griseus_chok1gshd
ENSAPOG00000024356	polr1c	86	73.179	ENSCGRG00000013225	Polr1c	99	72.517	Cricetulus_griseus_crigri
ENSAPOG00000024356	polr1c	100	84.046	ENSCSEG00000018097	polr1c	100	83.476	Cynoglossus_semilaevis
ENSAPOG00000024356	polr1c	58	30.000	ENSCVAG00000017931	polr2c	78	30.000	Cyprinodon_variegatus
ENSAPOG00000024356	polr1c	60	88.208	ENSCVAG00000005684	polr1c	85	88.208	Cyprinodon_variegatus
ENSAPOG00000024356	polr1c	100	81.197	ENSDARG00000039400	polr1c	96	80.342	Danio_rerio
ENSAPOG00000024356	polr1c	100	73.219	ENSDNOG00000042693	POLR1C	100	72.934	Dasypus_novemcinctus
ENSAPOG00000024356	polr1c	99	73.639	ENSDORG00000000429	Polr1c	99	73.352	Dipodomys_ordii
ENSAPOG00000024356	polr1c	90	53.943	FBgn0031657	CG3756	93	52.681	Drosophila_melanogaster
ENSAPOG00000024356	polr1c	99	69.628	ENSETEG00000010807	POLR1C	99	69.628	Echinops_telfairi
ENSAPOG00000024356	polr1c	98	68.116	ENSEBUG00000013725	polr1c	98	67.826	Eptatretus_burgeri
ENSAPOG00000024356	polr1c	99	73.066	ENSEASG00005003338	POLR1C	99	72.779	Equus_asinus_asinus
ENSAPOG00000024356	polr1c	99	73.066	ENSECAG00000023516	POLR1C	98	72.779	Equus_caballus
ENSAPOG00000024356	polr1c	99	74.212	ENSEEUG00000005471	POLR1C	99	73.926	Erinaceus_europaeus
ENSAPOG00000024356	polr1c	100	81.197	ENSELUG00000013027	polr1c	100	80.627	Esox_lucius
ENSAPOG00000024356	polr1c	99	74.499	ENSFCAG00000009735	POLR1C	99	74.212	Felis_catus
ENSAPOG00000024356	polr1c	93	71.560	ENSFALG00000012111	POLR1C	100	71.254	Ficedula_albicollis
ENSAPOG00000024356	polr1c	99	73.639	ENSFDAG00000008428	POLR1C	99	73.352	Fukomys_damarensis
ENSAPOG00000024356	polr1c	100	73.219	ENSFHEG00000000262	polr1c	100	73.789	Fundulus_heteroclitus
ENSAPOG00000024356	polr1c	50	84.659	ENSFHEG00000013867	-	86	84.659	Fundulus_heteroclitus
ENSAPOG00000024356	polr1c	93	79.573	ENSGMOG00000013878	polr1c	100	79.268	Gadus_morhua
ENSAPOG00000024356	polr1c	99	71.633	ENSGALG00000010349	POLR1C	99	71.347	Gallus_gallus
ENSAPOG00000024356	polr1c	100	86.895	ENSGAFG00000010153	polr1c	100	86.895	Gambusia_affinis
ENSAPOG00000024356	polr1c	100	84.615	ENSGACG00000002453	polr1c	100	84.615	Gasterosteus_aculeatus
ENSAPOG00000024356	polr1c	98	74.203	ENSGAGG00000010640	POLR1C	99	73.913	Gopherus_agassizii
ENSAPOG00000024356	polr1c	100	73.219	ENSGGOG00000010903	POLR1C	100	72.934	Gorilla_gorilla
ENSAPOG00000024356	polr1c	58	30.476	ENSHBUG00000023040	polr2c	83	30.476	Haplochromis_burtoni
ENSAPOG00000024356	polr1c	100	80.627	ENSHBUG00000017816	polr1c	100	79.772	Haplochromis_burtoni
ENSAPOG00000024356	polr1c	99	73.066	ENSHGLG00000019441	POLR1C	100	71.970	Heterocephalus_glaber_female
ENSAPOG00000024356	polr1c	99	73.352	ENSHGLG00100005970	POLR1C	99	73.066	Heterocephalus_glaber_male
ENSAPOG00000024356	polr1c	99	83.285	ENSHCOG00000002179	polr1c	99	83.285	Hippocampus_comes
ENSAPOG00000024356	polr1c	99	81.948	ENSIPUG00000024464	polr1c	99	81.375	Ictalurus_punctatus
ENSAPOG00000024356	polr1c	62	30.531	ENSSTOG00000015150	-	51	30.531	Ictidomys_tridecemlineatus
ENSAPOG00000024356	polr1c	99	73.639	ENSSTOG00000010631	POLR1C	99	73.352	Ictidomys_tridecemlineatus
ENSAPOG00000024356	polr1c	99	73.639	ENSJJAG00000023110	Polr1c	99	73.352	Jaculus_jaculus
ENSAPOG00000024356	polr1c	100	85.470	ENSKMAG00000014305	polr1c	97	85.470	Kryptolebias_marmoratus
ENSAPOG00000024356	polr1c	100	89.744	ENSLBEG00000014925	polr1c	100	89.744	Labrus_bergylta
ENSAPOG00000024356	polr1c	95	58.631	ENSLACG00000012567	POLR1C	98	58.036	Latimeria_chalumnae
ENSAPOG00000024356	polr1c	100	80.627	ENSLOCG00000016710	polr1c	96	80.057	Lepisosteus_oculatus
ENSAPOG00000024356	polr1c	87	74.098	ENSLAFG00000026248	POLR1C	100	74.098	Loxodonta_africana
ENSAPOG00000024356	polr1c	62	30.531	ENSLAFG00000027230	POLR2C	77	30.531	Loxodonta_africana
ENSAPOG00000024356	polr1c	100	72.934	ENSMFAG00000046295	POLR1C	100	72.650	Macaca_fascicularis
ENSAPOG00000024356	polr1c	100	72.934	ENSMMUG00000015192	POLR1C	100	72.650	Macaca_mulatta
ENSAPOG00000024356	polr1c	100	72.934	ENSMNEG00000028073	POLR1C	100	72.650	Macaca_nemestrina
ENSAPOG00000024356	polr1c	100	72.934	ENSMLEG00000034818	POLR1C	100	72.650	Mandrillus_leucophaeus
ENSAPOG00000024356	polr1c	100	89.174	ENSMAMG00000008700	polr1c	100	89.174	Mastacembelus_armatus
ENSAPOG00000024356	polr1c	100	89.459	ENSMZEG00005018545	polr1c	100	89.459	Maylandia_zebra
ENSAPOG00000024356	polr1c	84	68.136	ENSMGAG00000011020	POLR1C	100	67.797	Meleagris_gallopavo
ENSAPOG00000024356	polr1c	99	73.066	ENSMAUG00000014329	Polr1c	99	72.779	Mesocricetus_auratus
ENSAPOG00000024356	polr1c	99	71.633	ENSMICG00000005027	POLR1C	99	71.704	Microcebus_murinus
ENSAPOG00000024356	polr1c	99	73.352	ENSMOCG00000017549	Polr1c	99	73.066	Microtus_ochrogaster
ENSAPOG00000024356	polr1c	99	71.429	ENSMMOG00000005380	polr1c	99	72.000	Mola_mola
ENSAPOG00000024356	polr1c	84	75.593	ENSMODG00000018964	POLR1C	100	75.254	Monodelphis_domestica
ENSAPOG00000024356	polr1c	100	74.644	ENSMALG00000011711	polr1c	100	74.929	Monopterus_albus
ENSAPOG00000024356	polr1c	99	65.616	MGP_CAROLIEiJ_G0021662	Polr1c	100	72.348	Mus_caroli
ENSAPOG00000024356	polr1c	99	73.639	ENSMUSG00000067148	Polr1c	100	73.106	Mus_musculus
ENSAPOG00000024356	polr1c	99	74.212	MGP_PahariEiJ_G0020654	Polr1c	100	73.864	Mus_pahari
ENSAPOG00000024356	polr1c	99	73.639	MGP_SPRETEiJ_G0022574	Polr1c	100	73.106	Mus_spretus
ENSAPOG00000024356	polr1c	99	73.926	ENSMPUG00000012916	POLR1C	91	73.639	Mustela_putorius_furo
ENSAPOG00000024356	polr1c	99	73.352	ENSMLUG00000017751	POLR1C	99	73.066	Myotis_lucifugus
ENSAPOG00000024356	polr1c	99	73.352	ENSNGAG00000023487	Polr1c	100	74.915	Nannospalax_galili
ENSAPOG00000024356	polr1c	100	89.744	ENSNBRG00000018742	polr1c	100	89.744	Neolamprologus_brichardi
ENSAPOG00000024356	polr1c	100	72.934	ENSNLEG00000004035	POLR1C	100	72.650	Nomascus_leucogenys
ENSAPOG00000024356	polr1c	100	62.678	ENSMEUG00000006778	POLR1C	100	62.393	Notamacropus_eugenii
ENSAPOG00000024356	polr1c	77	72.325	ENSOPRG00000000145	POLR1C	99	71.956	Ochotona_princeps
ENSAPOG00000024356	polr1c	62	71.233	ENSODEG00000017109	-	97	71.698	Octodon_degus
ENSAPOG00000024356	polr1c	100	73.789	ENSODEG00000015831	-	100	73.504	Octodon_degus
ENSAPOG00000024356	polr1c	100	90.313	ENSONIG00000013133	polr1c	98	90.313	Oreochromis_niloticus
ENSAPOG00000024356	polr1c	99	70.487	ENSOANG00000003043	POLR1C	99	70.201	Ornithorhynchus_anatinus
ENSAPOG00000024356	polr1c	99	72.206	ENSOCUG00000005504	POLR1C	99	71.920	Oryctolagus_cuniculus
ENSAPOG00000024356	polr1c	99	83.046	ENSORLG00000019743	polr1c	99	83.046	Oryzias_latipes
ENSAPOG00000024356	polr1c	76	65.328	ENSORLG00020005555	polr1c	81	64.855	Oryzias_latipes_hni
ENSAPOG00000024356	polr1c	99	83.908	ENSORLG00020006489	POLR1C	99	83.908	Oryzias_latipes_hni
ENSAPOG00000024356	polr1c	99	83.333	ENSORLG00015013322	polr1c	99	83.333	Oryzias_latipes_hsok
ENSAPOG00000024356	polr1c	99	84.483	ENSOMEG00000016527	polr1c	99	84.483	Oryzias_melastigma
ENSAPOG00000024356	polr1c	99	72.779	ENSOGAG00000016318	POLR1C	99	72.206	Otolemur_garnettii
ENSAPOG00000024356	polr1c	99	73.639	ENSOARG00000007503	POLR1C	99	73.352	Ovis_aries
ENSAPOG00000024356	polr1c	100	73.219	ENSPPAG00000043678	POLR1C	100	72.934	Pan_paniscus
ENSAPOG00000024356	polr1c	99	74.499	ENSPPRG00000009760	POLR1C	99	74.212	Panthera_pardus
ENSAPOG00000024356	polr1c	99	74.499	ENSPTIG00000014813	POLR1C	99	74.212	Panthera_tigris_altaica
ENSAPOG00000024356	polr1c	100	73.219	ENSPTRG00000018202	POLR1C	100	72.934	Pan_troglodytes
ENSAPOG00000024356	polr1c	100	73.219	ENSPANG00000009025	POLR1C	99	72.934	Papio_anubis
ENSAPOG00000024356	polr1c	100	82.621	ENSPKIG00000009858	polr1c	100	82.051	Paramormyrops_kingsleyae
ENSAPOG00000024356	polr1c	99	73.352	ENSPSIG00000012580	POLR1C	94	73.352	Pelodiscus_sinensis
ENSAPOG00000024356	polr1c	58	30.000	ENSPMGG00000021249	polr2c	80	30.516	Periophthalmus_magnuspinnatus
ENSAPOG00000024356	polr1c	100	72.934	ENSPMGG00000012121	polr1c	100	73.219	Periophthalmus_magnuspinnatus
ENSAPOG00000024356	polr1c	99	73.352	ENSPEMG00000006970	Polr1c	99	72.779	Peromyscus_maniculatus_bairdii
ENSAPOG00000024356	polr1c	62	32.287	ENSPMAG00000004827	polr2c	91	32.287	Petromyzon_marinus
ENSAPOG00000024356	polr1c	100	70.621	ENSPMAG00000005560	polr1c	100	70.056	Petromyzon_marinus
ENSAPOG00000024356	polr1c	100	74.644	ENSPCIG00000028137	POLR1C	98	74.359	Phascolarctos_cinereus
ENSAPOG00000024356	polr1c	100	87.179	ENSPFOG00000014342	POLR1C	100	87.179	Poecilia_formosa
ENSAPOG00000024356	polr1c	100	87.179	ENSPFOG00000014357	polr1c	98	87.179	Poecilia_formosa
ENSAPOG00000024356	polr1c	60	87.264	ENSPLAG00000004111	polr1c	88	87.264	Poecilia_latipinna
ENSAPOG00000024356	polr1c	100	87.179	ENSPMEG00000011877	-	100	87.179	Poecilia_mexicana
ENSAPOG00000024356	polr1c	100	87.179	ENSPMEG00000008420	polr1c	100	87.179	Poecilia_mexicana
ENSAPOG00000024356	polr1c	100	86.040	ENSPREG00000007985	polr1c	100	86.040	Poecilia_reticulata
ENSAPOG00000024356	polr1c	100	72.934	ENSPPYG00000016645	POLR1C	100	72.650	Pongo_abelii
ENSAPOG00000024356	polr1c	99	71.633	ENSPCOG00000024628	POLR1C	99	71.347	Propithecus_coquereli
ENSAPOG00000024356	polr1c	99	68.195	ENSPVAG00000005689	POLR1C	99	68.195	Pteropus_vampyrus
ENSAPOG00000024356	polr1c	100	89.459	ENSPNYG00000003620	polr1c	100	89.459	Pundamilia_nyererei
ENSAPOG00000024356	polr1c	100	82.336	ENSPNAG00000008443	polr1c	100	81.766	Pygocentrus_nattereri
ENSAPOG00000024356	polr1c	99	72.779	ENSRNOG00000019079	Polr1c	100	71.212	Rattus_norvegicus
ENSAPOG00000024356	polr1c	100	73.219	ENSRBIG00000007155	POLR1C	100	72.934	Rhinopithecus_bieti
ENSAPOG00000024356	polr1c	100	73.219	ENSRROG00000000257	POLR1C	100	72.934	Rhinopithecus_roxellana
ENSAPOG00000024356	polr1c	92	48.447	YPR110C	RPC40	95	48.447	Saccharomyces_cerevisiae
ENSAPOG00000024356	polr1c	99	72.779	ENSSBOG00000025735	POLR1C	99	72.581	Saimiri_boliviensis_boliviensis
ENSAPOG00000024356	polr1c	100	67.236	ENSSHAG00000014456	POLR1C	100	66.952	Sarcophilus_harrisii
ENSAPOG00000024356	polr1c	100	82.621	ENSSFOG00015019860	polr1c	100	82.051	Scleropages_formosus
ENSAPOG00000024356	polr1c	100	88.319	ENSSMAG00000018865	polr1c	100	87.179	Scophthalmus_maximus
ENSAPOG00000024356	polr1c	100	91.453	ENSSDUG00000015745	polr1c	91	91.453	Seriola_dumerili
ENSAPOG00000024356	polr1c	100	90.883	ENSSLDG00000018285	polr1c	91	90.883	Seriola_lalandi_dorsalis
ENSAPOG00000024356	polr1c	98	71.884	ENSSPUG00000011822	POLR1C	99	71.304	Sphenodon_punctatus
ENSAPOG00000024356	polr1c	100	94.017	ENSSPAG00000022369	polr1c	100	94.017	Stegastes_partitus
ENSAPOG00000024356	polr1c	99	72.779	ENSSSCG00000028007	POLR1C	98	72.493	Sus_scrofa
ENSAPOG00000024356	polr1c	96	72.321	ENSTGUG00000009159	POLR1C	99	72.024	Taeniopygia_guttata
ENSAPOG00000024356	polr1c	99	84.571	ENSTRUG00000006264	polr1c	99	84.571	Takifugu_rubripes
ENSAPOG00000024356	polr1c	51	74.157	ENSTBEG00000002254	POLR1C	100	74.157	Tupaia_belangeri
ENSAPOG00000024356	polr1c	76	71.536	ENSTTRG00000006344	POLR1C	76	71.161	Tursiops_truncatus
ENSAPOG00000024356	polr1c	99	73.926	ENSUAMG00000025602	POLR1C	99	73.639	Ursus_americanus
ENSAPOG00000024356	polr1c	99	73.926	ENSUMAG00000005938	POLR1C	99	73.639	Ursus_maritimus
ENSAPOG00000024356	polr1c	99	71.060	ENSVVUG00000028922	POLR1C	99	70.774	Vulpes_vulpes
ENSAPOG00000024356	polr1c	99	68.857	ENSXETG00000010882	polr1c	99	68.286	Xenopus_tropicalis
ENSAPOG00000024356	polr1c	100	86.040	ENSXCOG00000014185	polr1c	100	85.185	Xiphophorus_couchianus
ENSAPOG00000024356	polr1c	100	86.610	ENSXMAG00000015076	polr1c	100	86.610	Xiphophorus_maculatus