EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPOG00000024437 (Gene tree)
Gene ID
110968512
Gene Symbol
-
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA-binding motif%2C single-stranded-interacting protein 1-like
Gene Type
protein_coding
Species
Acanthochromis_polyacanthus
Status
putative
Strand
Plus strand
Length
20789 bases
Position
chrMVNR01000044.1:478528-499316
Accession
110968512
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPOP00000034860RRM_1PF00076.221.1e-3012
ENSAPOP00000034860RRM_1PF00076.221.1e-3022
ENSAPOP00000020810RRM_1PF00076.221.3e-3012
ENSAPOP00000020810RRM_1PF00076.221.3e-3022
ENSAPOP00000020815RRM_1PF00076.221.3e-3012
ENSAPOP00000020815RRM_1PF00076.221.3e-3022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPOT00000035431-3797XM_022218416ENSAPOP00000020815396 (aa)XP_022074108UPI000B900F3B
ENSAPOT00000035429-2291XM_022218424ENSAPOP00000020810396 (aa)XP_022074116UPI000B900F3B
ENSAPOT00000031035-1143-ENSAPOP00000034860380 (aa)--
Gene Model
Click here to download ENSAPOG00000024437's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000024437's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPOG00000024437-9563.661ENSAPOG00000003432-9366.833
ENSAPOG00000024437-9467.222ENSAPOG00000014215rbms2b9568.286
ENSAPOG00000024437-9966.837ENSAPOG00000013761rbms1a9966.667
ENSAPOG00000024437-5432.500ENSAPOG00000002964celf45738.462
ENSAPOG00000024437-8867.059ENSAPOG00000007266rbms37971.818
ENSAPOG00000024437-9469.252ENSAPOG00000023300rbms2a8873.446
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPOG00000024437-9473.278ENSG00000153250RBMS18491.589Homo_sapiens
ENSAPOG00000024437-9470.845ENSAMEG00000012661RBMS19276.190Ailuropoda_melanoleuca
ENSAPOG00000024437-9959.439ENSACIG00000000113rbms1a9959.542Amphilophus_citrinellus
ENSAPOG00000024437-9889.147ENSACIG00000021498RBMS19790.698Amphilophus_citrinellus
ENSAPOG00000024437-9966.837ENSAOCG00000010066rbms1a9966.667Amphiprion_ocellaris
ENSAPOG00000024437-10097.222ENSAOCG00000014482-10097.222Amphiprion_ocellaris
ENSAPOG00000024437-9966.837ENSAPEG00000023563rbms1a9966.667Amphiprion_percula
ENSAPOG00000024437-10096.970ENSAPEG00000018371-10096.970Amphiprion_percula
ENSAPOG00000024437-10089.394ENSATEG00000018573RBMS110088.636Anabas_testudineus
ENSAPOG00000024437-9965.561ENSATEG00000015450rbms1a9965.394Anabas_testudineus
ENSAPOG00000024437-9578.215ENSAPLG00000007282RBMS18979.603Anas_platyrhynchos
ENSAPOG00000024437-9779.487ENSACAG00000011984RBMS18278.086Anolis_carolinensis
ENSAPOG00000024437-8671.772ENSANAG00000024424RBMS110077.640Aotus_nancymaae
ENSAPOG00000024437-10087.121ENSACLG00000013048RBMS110088.384Astatotilapia_calliptera
ENSAPOG00000024437-9965.561ENSACLG00000021512rbms1a9965.649Astatotilapia_calliptera
ENSAPOG00000024437-10074.242ENSAMXG00000002146rbms1a9974.242Astyanax_mexicanus
ENSAPOG00000024437-10083.081ENSAMXG00000009969RBMS110083.081Astyanax_mexicanus
ENSAPOG00000024437-9776.923ENSBTAG00000005180RBMS110076.355Bos_taurus
ENSAPOG00000024437-9770.180ENSCJAG00000022465-9972.237Callithrix_jacchus
ENSAPOG00000024437-9774.807ENSCJAG00000012871-9875.064Callithrix_jacchus
ENSAPOG00000024437-9473.278ENSCJAG00000014861-8977.904Callithrix_jacchus
ENSAPOG00000024437-9776.667ENSCAFG00000009922RBMS110076.108Canis_familiaris
ENSAPOG00000024437-9773.153ENSCAFG00020006120RBMS110072.749Canis_lupus_dingo
ENSAPOG00000024437-9472.176ENSCHIG00000023380RBMS18777.620Capra_hircus
ENSAPOG00000024437-9473.278ENSTSYG00000005584RBMS19577.904Carlito_syrichta
ENSAPOG00000024437-9473.003ENSCPOG00000012310RBMS19374.255Cavia_porcellus
ENSAPOG00000024437-9473.278ENSCCAG00000033841RBMS19178.470Cebus_capucinus
ENSAPOG00000024437-9776.744ENSCATG00000043032RBMS19577.904Cercocebus_atys
ENSAPOG00000024437-9472.727ENSCLAG00000003031RBMS19573.984Chinchilla_lanigera
ENSAPOG00000024437-9473.278ENSCSAG00000015687RBMS18778.470Chlorocebus_sabaeus
ENSAPOG00000024437-10078.218ENSCPBG00000026455RBMS110079.208Chrysemys_picta_bellii
ENSAPOG00000024437-9775.969ENSCANG00000042152RBMS19577.904Colobus_angolensis_palliatus
ENSAPOG00000024437-10071.801ENSCGRG00001022833Rbms110072.749Cricetulus_griseus_chok1gshd
ENSAPOG00000024437-9472.727ENSCGRG00000008824Rbms19374.255Cricetulus_griseus_crigri
ENSAPOG00000024437-9965.051ENSCSEG00000000889rbms1a9964.885Cynoglossus_semilaevis
ENSAPOG00000024437-10087.406ENSCSEG00000010652RBMS110086.398Cynoglossus_semilaevis
ENSAPOG00000024437-10086.111ENSCVAG00000002027RBMS110085.859Cyprinodon_variegatus
ENSAPOG00000024437-9965.561ENSCVAG00000014698rbms1a9965.394Cyprinodon_variegatus
ENSAPOG00000024437-10074.874ENSDARG00000074023rbms1a9974.874Danio_rerio
ENSAPOG00000024437-9470.185ENSDNOG00000040691RBMS19575.068Dasypus_novemcinctus
ENSAPOG00000024437-9775.641ENSDORG00000007103Rbms19574.255Dipodomys_ordii
ENSAPOG00000024437-9462.810ENSETEG00000012135RBMS19367.422Echinops_telfairi
ENSAPOG00000024437-9776.923ENSEASG00005023132RBMS110076.355Equus_asinus_asinus
ENSAPOG00000024437-9773.399ENSECAG00000019894RBMS110072.986Equus_caballus
ENSAPOG00000024437-6791.837ENSEEUG00000005628RBMS16690.000Erinaceus_europaeus
ENSAPOG00000024437-10068.170ENSELUG00000018923rbms1a10068.421Esox_lucius
ENSAPOG00000024437-9673.947ENSELUG00000019328RBMS19475.526Esox_lucius
ENSAPOG00000024437-9473.003ENSFCAG00000012524RBMS19577.620Felis_catus
ENSAPOG00000024437-9474.105ENSFALG00000004440RBMS19579.603Ficedula_albicollis
ENSAPOG00000024437-9775.897ENSFDAG00000015692RBMS19676.923Fukomys_damarensis
ENSAPOG00000024437-10085.859ENSFHEG00000000720RBMS110086.616Fundulus_heteroclitus
ENSAPOG00000024437-9965.561ENSFHEG00000005662rbms1a9772.330Fundulus_heteroclitus
ENSAPOG00000024437-9362.295ENSGMOG00000000525rbms1a9966.761Gadus_morhua
ENSAPOG00000024437-9778.205ENSGALG00000011132RBMS19679.231Gallus_gallus
ENSAPOG00000024437-10085.101ENSGAFG00000007708RBMS110087.879Gambusia_affinis
ENSAPOG00000024437-9363.662ENSGAFG00000011633rbms1a9568.895Gambusia_affinis
ENSAPOG00000024437-10088.636ENSGACG00000005671RBMS110088.636Gasterosteus_aculeatus
ENSAPOG00000024437-9760.052ENSGACG00000015174rbms1a9168.615Gasterosteus_aculeatus
ENSAPOG00000024437-10078.960ENSGAGG00000007866RBMS110079.208Gopherus_agassizii
ENSAPOG00000024437-9473.278ENSGGOG00000001264RBMS19577.904Gorilla_gorilla
ENSAPOG00000024437-9775.321ENSGGOG00000043756-10074.631Gorilla_gorilla
ENSAPOG00000024437-9965.561ENSHBUG00000004802rbms1a9965.649Haplochromis_burtoni
ENSAPOG00000024437-9487.668ENSHBUG00000004516RBMS19889.276Haplochromis_burtoni
ENSAPOG00000024437-9473.003ENSHGLG00000010387RBMS19373.984Heterocephalus_glaber_female
ENSAPOG00000024437-9473.003ENSHGLG00100014105RBMS19373.984Heterocephalus_glaber_male
ENSAPOG00000024437-9965.561ENSHCOG00000020097rbms1a9965.394Hippocampus_comes
ENSAPOG00000024437-10082.323ENSHCOG00000016668RBMS110083.333Hippocampus_comes
ENSAPOG00000024437-10074.747ENSIPUG00000010131RBMS19974.747Ictalurus_punctatus
ENSAPOG00000024437-10083.081ENSIPUG00000014677RBMS110082.828Ictalurus_punctatus
ENSAPOG00000024437-9473.278ENSSTOG00000012501RBMS19374.526Ictidomys_tridecemlineatus
ENSAPOG00000024437-9471.625ENSJJAG00000016543Rbms19573.713Jaculus_jaculus
ENSAPOG00000024437-9964.286ENSKMAG00000011839-9964.122Kryptolebias_marmoratus
ENSAPOG00000024437-10087.879ENSKMAG00000013911RBMS110089.141Kryptolebias_marmoratus
ENSAPOG00000024437-10089.646ENSLBEG00000005787RBMS110091.162Labrus_bergylta
ENSAPOG00000024437-9966.071ENSLBEG00000025962rbms1a9965.903Labrus_bergylta
ENSAPOG00000024437-10077.419ENSLACG00000004324RBMS19977.419Latimeria_chalumnae
ENSAPOG00000024437-10081.566ENSLOCG00000008622rbms1a10083.586Lepisosteus_oculatus
ENSAPOG00000024437-9471.625ENSLAFG00000017217RBMS19277.054Loxodonta_africana
ENSAPOG00000024437-9776.744ENSMFAG00000000274RBMS19577.904Macaca_fascicularis
ENSAPOG00000024437-9776.744ENSMMUG00000016825RBMS110073.223Macaca_mulatta
ENSAPOG00000024437-9776.744ENSMNEG00000039425RBMS19577.904Macaca_nemestrina
ENSAPOG00000024437-9776.486ENSMLEG00000031517RBMS19577.620Mandrillus_leucophaeus
ENSAPOG00000024437-10087.374ENSMAMG00000003159-10088.131Mastacembelus_armatus
ENSAPOG00000024437-9965.306ENSMAMG00000005018rbms1a9965.140Mastacembelus_armatus
ENSAPOG00000024437-8290.184ENSMZEG00005007313RBMS19190.184Maylandia_zebra
ENSAPOG00000024437-9965.561ENSMZEG00005005661rbms1a9965.649Maylandia_zebra
ENSAPOG00000024437-9474.931ENSMGAG00000011054RBMS110079.331Meleagris_gallopavo
ENSAPOG00000024437-10072.038ENSMAUG00000008550Rbms110072.986Mesocricetus_auratus
ENSAPOG00000024437-9472.452ENSMICG00000008325RBMS19277.620Microcebus_murinus
ENSAPOG00000024437-10071.327ENSMOCG00000022617Rbms110072.275Microtus_ochrogaster
ENSAPOG00000024437-10090.404ENSMMOG00000003707RBMS110091.919Mola_mola
ENSAPOG00000024437-9962.245ENSMMOG00000018249rbms1a9962.087Mola_mola
ENSAPOG00000024437-9578.478ENSMODG00000005250RBMS18780.170Monodelphis_domestica
ENSAPOG00000024437-9687.173ENSMALG00000015715-10088.131Monopterus_albus
ENSAPOG00000024437-9965.306ENSMALG00000014235rbms1a9965.140Monopterus_albus
ENSAPOG00000024437-9971.531MGP_CAROLIEiJ_G0023586Rbms19972.488Mus_caroli
ENSAPOG00000024437-9971.770ENSMUSG00000026970Rbms19972.727Mus_musculus
ENSAPOG00000024437-9974.129MGP_PahariEiJ_G0025037Rbms19975.124Mus_pahari
ENSAPOG00000024437-9971.770MGP_SPRETEiJ_G0024508Rbms19481.915Mus_spretus
ENSAPOG00000024437-9469.129ENSMPUG00000000539RBMS18774.255Mustela_putorius_furo
ENSAPOG00000024437-9468.241ENSMLUG00000008762RBMS18873.315Myotis_lucifugus
ENSAPOG00000024437-10071.090ENSNGAG00000013636Rbms110072.038Nannospalax_galili
ENSAPOG00000024437-9479.444ENSNBRG00000015151RBMS19485.387Neolamprologus_brichardi
ENSAPOG00000024437-8865.903ENSNBRG00000020217rbms1a9566.000Neolamprologus_brichardi
ENSAPOG00000024437-9473.278ENSNLEG00000001667RBMS19577.904Nomascus_leucogenys
ENSAPOG00000024437-8665.964ENSMEUG00000000746RBMS110068.012Notamacropus_eugenii
ENSAPOG00000024437-9466.116ENSOPRG00000012431RBMS18771.105Ochotona_princeps
ENSAPOG00000024437-9471.901ENSODEG00000013934RBMS19573.984Octodon_degus
ENSAPOG00000024437-10088.384ENSONIG00000008934RBMS110089.899Oreochromis_niloticus
ENSAPOG00000024437-9965.561ENSONIG00000003329rbms1a9966.071Oreochromis_niloticus
ENSAPOG00000024437-9578.701ENSOANG00000006166RBMS18980.453Ornithorhynchus_anatinus
ENSAPOG00000024437-5948.617ENSOANG00000004477-9954.098Ornithorhynchus_anatinus
ENSAPOG00000024437-9472.452ENSOCUG00000017365RBMS18377.904Oryctolagus_cuniculus
ENSAPOG00000024437-10081.360ENSORLG00000016818RBMS19982.368Oryzias_latipes
ENSAPOG00000024437-9964.031ENSORLG00000003917rbms1a9963.868Oryzias_latipes
ENSAPOG00000024437-9963.776ENSORLG00020018663rbms1a9963.613Oryzias_latipes_hni
ENSAPOG00000024437-10081.360ENSORLG00020022335RBMS19982.368Oryzias_latipes_hni
ENSAPOG00000024437-10081.864ENSORLG00015018208RBMS19982.872Oryzias_latipes_hsok
ENSAPOG00000024437-9964.031ENSORLG00015016556rbms1a9963.868Oryzias_latipes_hsok
ENSAPOG00000024437-10083.333ENSOMEG00000002394RBMS19985.606Oryzias_melastigma
ENSAPOG00000024437-9472.527ENSOGAG00000002900RBMS19577.465Otolemur_garnettii
ENSAPOG00000024437-9472.176ENSOARG00000006870RBMS19573.854Ovis_aries
ENSAPOG00000024437-9473.278ENSPPAG00000040083RBMS19278.470Pan_paniscus
ENSAPOG00000024437-9474.271ENSPPAG00000036520-9374.788Pan_paniscus
ENSAPOG00000024437-9473.003ENSPPRG00000005040RBMS19577.620Panthera_pardus
ENSAPOG00000024437-9473.003ENSPTIG00000021240RBMS19577.620Panthera_tigris_altaica
ENSAPOG00000024437-9473.278ENSPTRG00000052304RBMS19278.470Pan_troglodytes
ENSAPOG00000024437-9470.523ENSPTRG00000039358-9175.354Pan_troglodytes
ENSAPOG00000024437-9776.744ENSPANG00000001383RBMS19278.470Papio_anubis
ENSAPOG00000024437-10078.535ENSPKIG00000012818rbms1a10077.778Paramormyrops_kingsleyae
ENSAPOG00000024437-10081.108ENSPKIG00000001498rbms1a10081.108Paramormyrops_kingsleyae
ENSAPOG00000024437-9677.720ENSPSIG00000010240RBMS19578.756Pelodiscus_sinensis
ENSAPOG00000024437-9376.471ENSPMGG00000006310RBMS19678.223Periophthalmus_magnuspinnatus
ENSAPOG00000024437-9962.245ENSPMGG00000004341rbms1a9962.341Periophthalmus_magnuspinnatus
ENSAPOG00000024437-9773.153ENSPEMG00000009449Rbms19674.138Peromyscus_maniculatus_bairdii
ENSAPOG00000024437-10076.847ENSPCIG00000018405RBMS110078.079Phascolarctos_cinereus
ENSAPOG00000024437-9966.327ENSPFOG00000016116rbms1a9966.158Poecilia_formosa
ENSAPOG00000024437-10086.364ENSPFOG00000017483RBMS110088.384Poecilia_formosa
ENSAPOG00000024437-10085.606ENSPLAG00000000920RBMS110088.384Poecilia_latipinna
ENSAPOG00000024437-9966.327ENSPLAG00000013864rbms1a9966.158Poecilia_latipinna
ENSAPOG00000024437-10086.364ENSPMEG00000015838RBMS110088.384Poecilia_mexicana
ENSAPOG00000024437-9966.327ENSPMEG00000016185rbms1a9966.158Poecilia_mexicana
ENSAPOG00000024437-10086.616ENSPREG00000008146RBMS110088.636Poecilia_reticulata
ENSAPOG00000024437-9966.327ENSPREG00000020161rbms1a9966.158Poecilia_reticulata
ENSAPOG00000024437-9469.921ENSPPYG00000012879-8774.797Pongo_abelii
ENSAPOG00000024437-9467.218ENSPCAG00000009673RBMS18772.238Procavia_capensis
ENSAPOG00000024437-9472.452ENSPCOG00000027294RBMS19577.054Propithecus_coquereli
ENSAPOG00000024437-7890.798ENSPVAG00000010429RBMS17490.244Pteropus_vampyrus
ENSAPOG00000024437-10087.374ENSPNYG00000002643RBMS110088.889Pundamilia_nyererei
ENSAPOG00000024437-10084.596ENSPNAG00000023479RBMS110084.596Pygocentrus_nattereri
ENSAPOG00000024437-9873.127ENSPNAG00000010225rbms1a9873.127Pygocentrus_nattereri
ENSAPOG00000024437-9372.702ENSRNOG00000008482Rbms19074.247Rattus_norvegicus
ENSAPOG00000024437-9776.289ENSRBIG00000044262RBMS110073.460Rhinopithecus_bieti
ENSAPOG00000024437-9776.744ENSRROG00000043108RBMS110073.697Rhinopithecus_roxellana
ENSAPOG00000024437-9473.278ENSSBOG00000034705RBMS19578.470Saimiri_boliviensis_boliviensis
ENSAPOG00000024437-9578.215ENSSHAG00000012271RBMS110074.783Sarcophilus_harrisii
ENSAPOG00000024437-9472.145ENSSFOG00015014493rbms1a9577.650Scleropages_formosus
ENSAPOG00000024437-10080.556ENSSFOG00015022929rbms110082.071Scleropages_formosus
ENSAPOG00000024437-10088.889ENSSMAG00000012152RBMS19689.394Scophthalmus_maximus
ENSAPOG00000024437-9364.124ENSSMAG00000012722rbms1a9568.314Scophthalmus_maximus
ENSAPOG00000024437-9966.327ENSSDUG00000020602rbms1a9966.158Seriola_dumerili
ENSAPOG00000024437-10091.162ENSSDUG00000018803RBMS110092.677Seriola_dumerili
ENSAPOG00000024437-10091.414ENSSLDG00000016556RBMS110092.929Seriola_lalandi_dorsalis
ENSAPOG00000024437-9966.327ENSSLDG00000009495rbms1a9966.158Seriola_lalandi_dorsalis
ENSAPOG00000024437-7575.253ENSSARG00000011085RBMS17174.874Sorex_araneus
ENSAPOG00000024437-9474.931ENSSPUG00000017163RBMS19480.170Sphenodon_punctatus
ENSAPOG00000024437-9966.582ENSSPAG00000005371rbms1a9966.412Stegastes_partitus
ENSAPOG00000024437-10095.960ENSSPAG00000000059RBMS110095.960Stegastes_partitus
ENSAPOG00000024437-9774.615ENSSSCG00000015888RBMS110075.616Sus_scrofa
ENSAPOG00000024437-9578.215ENSTGUG00000006606RBMS18779.603Taeniopygia_guttata
ENSAPOG00000024437-9964.304ENSTRUG00000017155rbms1a9964.141Takifugu_rubripes
ENSAPOG00000024437-10083.375ENSTRUG00000005466-10085.139Takifugu_rubripes
ENSAPOG00000024437-9660.548ENSTNIG00000009477rbms1a10063.385Tetraodon_nigroviridis
ENSAPOG00000024437-10079.790ENSTNIG00000016496RBMS19788.218Tetraodon_nigroviridis
ENSAPOG00000024437-7989.873ENSTBEG00000016156RBMS18189.308Tupaia_belangeri
ENSAPOG00000024437-9472.452ENSTTRG00000011058RBMS19377.620Tursiops_truncatus
ENSAPOG00000024437-9471.625ENSUAMG00000022331RBMS18777.054Ursus_americanus
ENSAPOG00000024437-9471.625ENSUMAG00000008605RBMS19177.054Ursus_maritimus
ENSAPOG00000024437-8875.740ENSVPAG00000002716RBMS18781.402Vicugna_pacos
ENSAPOG00000024437-9471.901ENSVVUG00000018682RBMS19577.337Vulpes_vulpes
ENSAPOG00000024437-9673.438ENSXETG00000016204rbms110073.438Xenopus_tropicalis
ENSAPOG00000024437-9963.265ENSXCOG00000001659rbms1a9963.104Xiphophorus_couchianus
ENSAPOG00000024437-8887.393ENSXCOG00000000211RBMS19587.393Xiphophorus_couchianus
ENSAPOG00000024437-9966.071ENSXMAG00000001802rbms1a9965.903Xiphophorus_maculatus
ENSAPOG00000024437-10085.606ENSXMAG00000011405RBMS110087.626Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us