EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000024479 (Gene tree)
Gene ID: 110953028
Gene Symbol: rabl3
Alias: fb40b02|wu:fb40b02|zgc:100876
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 3917 bases
Position: chrMVNR01000273.1:558868-562784
Accession: 110953028
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000020852	MMR_HSR1	PF01926.23	6.7e-06	1	1
ENSAPOP00000034892	MMR_HSR1	PF01926.23	8.6e-06	1	1
ENSAPOP00000034889	MMR_HSR1	PF01926.23	9.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000031084	-	591	-	ENSAPOP00000020852	196 (aa)	-	-
ENSAPOT00000035452	-	1367	-	ENSAPOP00000034892	226 (aa)	-	-
ENSAPOT00000035450	-	1174	XM_022196837	ENSAPOP00000034889	234 (aa)	XP_022052529	UPI000B8FE76C

Gene Model

Click here to download ENSAPOG00000024479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000024479's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000024479	rabl3	58	31.298	ENSAPOG00000014970	-	58	31.298
ENSAPOG00000024479	rabl3	62	31.405	ENSAPOG00000005301	RAB39B	58	31.298

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000024479	rabl3	100	85.232	ENSG00000144840	RABL3	100	93.023	Homo_sapiens
ENSAPOG00000024479	rabl3	100	86.076	ENSAMEG00000004809	RABL3	100	86.076	Ailuropoda_melanoleuca
ENSAPOG00000024479	rabl3	100	93.590	ENSACIG00000014343	rabl3	100	93.590	Amphilophus_citrinellus
ENSAPOG00000024479	rabl3	100	100.000	ENSAOCG00000011851	rabl3	100	100.000	Amphiprion_ocellaris
ENSAPOG00000024479	rabl3	100	100.000	ENSAPEG00000011214	rabl3	100	100.000	Amphiprion_percula
ENSAPOG00000024479	rabl3	100	97.863	ENSATEG00000003503	rabl3	100	97.863	Anabas_testudineus
ENSAPOG00000024479	rabl3	100	80.169	ENSACAG00000011313	-	100	80.169	Anolis_carolinensis
ENSAPOG00000024479	rabl3	100	87.342	ENSANAG00000027278	RABL3	100	87.342	Aotus_nancymaae
ENSAPOG00000024479	rabl3	100	97.863	ENSACLG00000009820	rabl3	100	97.863	Astatotilapia_calliptera
ENSAPOG00000024479	rabl3	100	93.590	ENSAMXG00000038716	rabl3	100	93.590	Astyanax_mexicanus
ENSAPOG00000024479	rabl3	100	87.764	ENSBTAG00000015898	RABL3	100	87.764	Bos_taurus
ENSAPOG00000024479	rabl3	100	87.342	ENSCJAG00000008611	RABL3	100	87.342	Callithrix_jacchus
ENSAPOG00000024479	rabl3	100	86.920	ENSCAFG00000011292	RABL3	89	86.920	Canis_familiaris
ENSAPOG00000024479	rabl3	100	86.920	ENSCAFG00020006397	RABL3	100	86.920	Canis_lupus_dingo
ENSAPOG00000024479	rabl3	100	87.764	ENSCHIG00000017365	RABL3	100	87.764	Capra_hircus
ENSAPOG00000024479	rabl3	100	85.654	ENSCPOG00000009645	RABL3	100	85.654	Cavia_porcellus
ENSAPOG00000024479	rabl3	100	85.654	ENSCATG00000032561	RABL3	100	85.654	Cercocebus_atys
ENSAPOG00000024479	rabl3	100	85.232	ENSCLAG00000010855	RABL3	100	85.232	Chinchilla_lanigera
ENSAPOG00000024479	rabl3	99	85.470	ENSCSAG00000007155	RABL3	100	85.470	Chlorocebus_sabaeus
ENSAPOG00000024479	rabl3	100	86.498	ENSCPBG00000001999	RABL3	100	86.498	Chrysemys_picta_bellii
ENSAPOG00000024479	rabl3	100	85.654	ENSCANG00000031684	RABL3	100	85.654	Colobus_angolensis_palliatus
ENSAPOG00000024479	rabl3	100	83.544	ENSCGRG00001021537	Rabl3	100	83.544	Cricetulus_griseus_chok1gshd
ENSAPOG00000024479	rabl3	100	83.544	ENSCGRG00000002114	Rabl3	100	83.544	Cricetulus_griseus_crigri
ENSAPOG00000024479	rabl3	100	88.571	ENSCSEG00000014982	rabl3	100	88.571	Cynoglossus_semilaevis
ENSAPOG00000024479	rabl3	100	95.408	ENSCVAG00000009904	rabl3	100	95.408	Cyprinodon_variegatus
ENSAPOG00000024479	rabl3	100	94.017	ENSDARG00000040959	rabl3	100	94.017	Danio_rerio
ENSAPOG00000024479	rabl3	100	85.654	ENSDNOG00000008174	RABL3	100	85.654	Dasypus_novemcinctus
ENSAPOG00000024479	rabl3	100	85.232	ENSETEG00000010206	RABL3	100	85.232	Echinops_telfairi
ENSAPOG00000024479	rabl3	100	87.342	ENSECAG00000023059	RABL3	100	87.342	Equus_caballus
ENSAPOG00000024479	rabl3	100	81.435	ENSEEUG00000002897	RABL3	100	81.435	Erinaceus_europaeus
ENSAPOG00000024479	rabl3	100	93.590	ENSELUG00000014758	rabl3	100	93.590	Esox_lucius
ENSAPOG00000024479	rabl3	100	86.920	ENSFCAG00000031879	RABL3	100	82.075	Felis_catus
ENSAPOG00000024479	rabl3	100	84.388	ENSFALG00000005296	RABL3	100	84.388	Ficedula_albicollis
ENSAPOG00000024479	rabl3	100	86.017	ENSFDAG00000000307	RABL3	100	86.017	Fukomys_damarensis
ENSAPOG00000024479	rabl3	100	93.590	ENSFHEG00000011273	rabl3	100	93.590	Fundulus_heteroclitus
ENSAPOG00000024479	rabl3	100	94.444	ENSGMOG00000007845	rabl3	100	94.444	Gadus_morhua
ENSAPOG00000024479	rabl3	100	85.654	ENSGALG00000014949	RABL3	100	85.654	Gallus_gallus
ENSAPOG00000024479	rabl3	100	93.367	ENSGAFG00000015953	rabl3	100	93.367	Gambusia_affinis
ENSAPOG00000024479	rabl3	100	93.590	ENSGACG00000007387	rabl3	100	95.349	Gasterosteus_aculeatus
ENSAPOG00000024479	rabl3	100	86.920	ENSGAGG00000003677	RABL3	100	86.920	Gopherus_agassizii
ENSAPOG00000024479	rabl3	100	85.232	ENSGGOG00000006059	RABL3	100	85.232	Gorilla_gorilla
ENSAPOG00000024479	rabl3	100	98.291	ENSHBUG00000019478	rabl3	93	98.291	Haplochromis_burtoni
ENSAPOG00000024479	rabl3	100	86.017	ENSHGLG00000014491	RABL3	100	86.017	Heterocephalus_glaber_female
ENSAPOG00000024479	rabl3	100	86.017	ENSHGLG00100004866	RABL3	100	86.017	Heterocephalus_glaber_male
ENSAPOG00000024479	rabl3	100	97.959	ENSHCOG00000019245	rabl3	100	97.959	Hippocampus_comes
ENSAPOG00000024479	rabl3	100	92.308	ENSIPUG00000012657	rabl3	100	92.308	Ictalurus_punctatus
ENSAPOG00000024479	rabl3	100	85.232	ENSSTOG00000019452	RABL3	100	85.232	Ictidomys_tridecemlineatus
ENSAPOG00000024479	rabl3	100	80.660	ENSJJAG00000023553	Rabl3	100	80.660	Jaculus_jaculus
ENSAPOG00000024479	rabl3	100	91.026	ENSKMAG00000015464	rabl3	100	91.026	Kryptolebias_marmoratus
ENSAPOG00000024479	rabl3	100	97.863	ENSLBEG00000020595	rabl3	100	97.863	Labrus_bergylta
ENSAPOG00000024479	rabl3	100	97.863	ENSLBEG00000010627	-	100	97.863	Labrus_bergylta
ENSAPOG00000024479	rabl3	100	88.608	ENSLOCG00000006265	rabl3	100	88.608	Lepisosteus_oculatus
ENSAPOG00000024479	rabl3	100	86.498	ENSLAFG00000003711	RABL3	100	86.498	Loxodonta_africana
ENSAPOG00000024479	rabl3	100	85.654	ENSMFAG00000031923	RABL3	100	85.654	Macaca_fascicularis
ENSAPOG00000024479	rabl3	100	80.660	ENSMMUG00000001594	RABL3	100	80.660	Macaca_mulatta
ENSAPOG00000024479	rabl3	100	85.654	ENSMNEG00000043980	RABL3	100	85.654	Macaca_nemestrina
ENSAPOG00000024479	rabl3	100	85.654	ENSMLEG00000028177	RABL3	100	85.654	Mandrillus_leucophaeus
ENSAPOG00000024479	rabl3	100	97.863	ENSMAMG00000015155	rabl3	100	97.863	Mastacembelus_armatus
ENSAPOG00000024479	rabl3	100	97.863	ENSMZEG00005002607	rabl3	100	97.863	Maylandia_zebra
ENSAPOG00000024479	rabl3	100	83.544	ENSMAUG00000013022	Rabl3	100	83.544	Mesocricetus_auratus
ENSAPOG00000024479	rabl3	100	86.498	ENSMICG00000049288	RABL3	100	86.498	Microcebus_murinus
ENSAPOG00000024479	rabl3	100	82.700	ENSMOCG00000015237	Rabl3	100	82.700	Microtus_ochrogaster
ENSAPOG00000024479	rabl3	100	93.220	ENSMMOG00000005628	rabl3	100	93.220	Mola_mola
ENSAPOG00000024479	rabl3	100	86.920	ENSMODG00000018232	RABL3	100	86.920	Monodelphis_domestica
ENSAPOG00000024479	rabl3	100	89.873	ENSMALG00000018837	rabl3	100	89.873	Monopterus_albus
ENSAPOG00000024479	rabl3	100	83.544	MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	Mus_caroli
ENSAPOG00000024479	rabl3	100	83.544	ENSMUSG00000022827	Rabl3	100	92.248	Mus_musculus
ENSAPOG00000024479	rabl3	100	83.122	MGP_PahariEiJ_G0016429	Rabl3	100	92.248	Mus_pahari
ENSAPOG00000024479	rabl3	100	83.544	MGP_SPRETEiJ_G0021628	Rabl3	100	92.248	Mus_spretus
ENSAPOG00000024479	rabl3	100	86.920	ENSMPUG00000008257	RABL3	89	86.920	Mustela_putorius_furo
ENSAPOG00000024479	rabl3	100	86.076	ENSMLUG00000014113	RABL3	100	86.076	Myotis_lucifugus
ENSAPOG00000024479	rabl3	98	81.068	ENSNGAG00000001939	Rabl3	99	81.068	Nannospalax_galili
ENSAPOG00000024479	rabl3	98	97.738	ENSNBRG00000012423	rabl3	94	97.738	Neolamprologus_brichardi
ENSAPOG00000024479	rabl3	100	85.232	ENSNLEG00000031723	RABL3	100	85.232	Nomascus_leucogenys
ENSAPOG00000024479	rabl3	100	85.232	ENSMEUG00000006606	RABL3	100	85.232	Notamacropus_eugenii
ENSAPOG00000024479	rabl3	100	85.232	ENSODEG00000004758	-	100	85.232	Octodon_degus
ENSAPOG00000024479	rabl3	100	98.718	ENSONIG00000004281	rabl3	100	98.718	Oreochromis_niloticus
ENSAPOG00000024479	rabl3	99	84.681	ENSOANG00000003928	RABL3	99	84.681	Ornithorhynchus_anatinus
ENSAPOG00000024479	rabl3	100	94.872	ENSORLG00000020457	rabl3	100	94.872	Oryzias_latipes
ENSAPOG00000024479	rabl3	100	94.872	ENSORLG00020008991	rabl3	100	90.171	Oryzias_latipes_hni
ENSAPOG00000024479	rabl3	100	94.872	ENSORLG00015005649	rabl3	88	94.872	Oryzias_latipes_hsok
ENSAPOG00000024479	rabl3	100	96.154	ENSOMEG00000015066	rabl3	100	96.154	Oryzias_melastigma
ENSAPOG00000024479	rabl3	100	85.654	ENSOGAG00000005961	RABL3	100	85.654	Otolemur_garnettii
ENSAPOG00000024479	rabl3	100	87.764	ENSOARG00000019939	RABL3	100	87.764	Ovis_aries
ENSAPOG00000024479	rabl3	94	83.857	ENSPPAG00000036997	RABL3	87	83.857	Pan_paniscus
ENSAPOG00000024479	rabl3	100	86.920	ENSPPRG00000016325	RABL3	100	86.920	Panthera_pardus
ENSAPOG00000024479	rabl3	100	86.920	ENSPTIG00000018021	RABL3	100	86.920	Panthera_tigris_altaica
ENSAPOG00000024479	rabl3	100	85.232	ENSPTRG00000015272	RABL3	100	85.232	Pan_troglodytes
ENSAPOG00000024479	rabl3	100	85.654	ENSPANG00000001339	RABL3	100	85.654	Papio_anubis
ENSAPOG00000024479	rabl3	100	95.408	ENSPKIG00000007818	rabl3	100	95.408	Paramormyrops_kingsleyae
ENSAPOG00000024479	rabl3	100	86.076	ENSPSIG00000011358	RABL3	100	86.076	Pelodiscus_sinensis
ENSAPOG00000024479	rabl3	100	90.171	ENSPMGG00000015794	rabl3	100	90.171	Periophthalmus_magnuspinnatus
ENSAPOG00000024479	rabl3	100	83.544	ENSPEMG00000016913	Rabl3	100	83.544	Peromyscus_maniculatus_bairdii
ENSAPOG00000024479	rabl3	100	86.076	ENSPCIG00000018922	RABL3	100	86.076	Phascolarctos_cinereus
ENSAPOG00000024479	rabl3	100	94.872	ENSPFOG00000008586	rabl3	100	94.872	Poecilia_formosa
ENSAPOG00000024479	rabl3	100	95.408	ENSPLAG00000014482	rabl3	100	95.408	Poecilia_latipinna
ENSAPOG00000024479	rabl3	100	95.408	ENSPMEG00000002295	rabl3	100	95.408	Poecilia_mexicana
ENSAPOG00000024479	rabl3	100	95.408	ENSPREG00000014815	rabl3	100	95.408	Poecilia_reticulata
ENSAPOG00000024479	rabl3	100	85.654	ENSPPYG00000013501	RABL3	100	85.654	Pongo_abelii
ENSAPOG00000024479	rabl3	100	86.920	ENSPCOG00000022230	RABL3	100	86.920	Propithecus_coquereli
ENSAPOG00000024479	rabl3	100	85.232	ENSPVAG00000010013	RABL3	100	85.232	Pteropus_vampyrus
ENSAPOG00000024479	rabl3	100	98.291	ENSPNYG00000006659	rabl3	100	98.291	Pundamilia_nyererei
ENSAPOG00000024479	rabl3	100	96.939	ENSPNAG00000000748	rabl3	100	96.939	Pygocentrus_nattereri
ENSAPOG00000024479	rabl3	100	83.122	ENSRNOG00000026085	Rabl3	100	83.122	Rattus_norvegicus
ENSAPOG00000024479	rabl3	100	85.654	ENSRBIG00000040941	RABL3	100	85.654	Rhinopithecus_bieti
ENSAPOG00000024479	rabl3	100	85.654	ENSRROG00000043745	RABL3	100	85.654	Rhinopithecus_roxellana
ENSAPOG00000024479	rabl3	100	87.342	ENSSBOG00000004022	RABL3	100	87.342	Saimiri_boliviensis_boliviensis
ENSAPOG00000024479	rabl3	100	85.232	ENSSHAG00000012233	RABL3	100	85.232	Sarcophilus_harrisii
ENSAPOG00000024479	rabl3	100	94.017	ENSSFOG00015010171	rabl3	100	94.017	Scleropages_formosus
ENSAPOG00000024479	rabl3	100	97.436	ENSSMAG00000002403	rabl3	100	97.436	Scophthalmus_maximus
ENSAPOG00000024479	rabl3	100	98.291	ENSSDUG00000012078	rabl3	100	98.291	Seriola_dumerili
ENSAPOG00000024479	rabl3	100	98.718	ENSSLDG00000021899	rabl3	100	98.718	Seriola_lalandi_dorsalis
ENSAPOG00000024479	rabl3	100	86.498	ENSSARG00000008316	RABL3	100	86.498	Sorex_araneus
ENSAPOG00000024479	rabl3	100	86.076	ENSSPUG00000017490	RABL3	100	86.076	Sphenodon_punctatus
ENSAPOG00000024479	rabl3	100	98.718	ENSSPAG00000011642	rabl3	100	98.718	Stegastes_partitus
ENSAPOG00000024479	rabl3	100	87.342	ENSSSCG00000035258	RABL3	100	87.342	Sus_scrofa
ENSAPOG00000024479	rabl3	100	84.810	ENSTGUG00000013374	RABL3	100	84.810	Taeniopygia_guttata
ENSAPOG00000024479	rabl3	91	95.531	ENSTRUG00000007846	RABL3	100	97.656	Takifugu_rubripes
ENSAPOG00000024479	rabl3	100	73.840	ENSTBEG00000005153	RABL3	100	73.840	Tupaia_belangeri
ENSAPOG00000024479	rabl3	100	86.076	ENSUAMG00000005299	RABL3	100	86.076	Ursus_americanus
ENSAPOG00000024479	rabl3	100	85.654	ENSUMAG00000025256	RABL3	89	85.654	Ursus_maritimus
ENSAPOG00000024479	rabl3	100	87.342	ENSVPAG00000003776	RABL3	100	87.342	Vicugna_pacos
ENSAPOG00000024479	rabl3	100	86.920	ENSVVUG00000022300	RABL3	89	86.920	Vulpes_vulpes
ENSAPOG00000024479	rabl3	100	94.444	ENSXMAG00000003244	rabl3	100	94.444	Xiphophorus_maculatus