EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000000198 (Gene tree)
Gene ID: 113148023
Gene Symbol: srsf5a
Alias: fb49e01|im:6906390|sfrs5|sfrs5a|wu:fb49e01|wu:fj09b12
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 6287 bases
Position: chrOOHO01000007.1:4756921-4763207
Accession: 113148023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000000205	RRM_1	PF00076.22	3.1e-33	1	2
ENSATEP00000000205	RRM_1	PF00076.22	3.1e-33	2	2
ENSATEP00000000221	RRM_1	PF00076.22	3.1e-33	1	2
ENSATEP00000000221	RRM_1	PF00076.22	3.1e-33	2	2
ENSATEP00000000205	RRM_3	PF08777.11	1.8e-07	1	1
ENSATEP00000000221	RRM_3	PF08777.11	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000000231	-	2608	-	ENSATEP00000000221	287 (aa)	XP_026195257	UPI000E4596BF
ENSATET00000000215	-	2485	-	ENSATEP00000000205	287 (aa)	XP_026195257	UPI000E4596BF

Gene Model

Click here to download ENSATEG00000000198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000000198's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000000198	srsf5a	61	40.556	ENSATEG00000021567	-	68	40.556
ENSATEG00000000198	srsf5a	64	65.027	ENSATEG00000007255	-	86	47.945
ENSATEG00000000198	srsf5a	66	71.503	ENSATEG00000019112	srsf5b	63	71.505
ENSATEG00000000198	srsf5a	85	35.200	ENSATEG00000022403	-	86	35.600
ENSATEG00000000198	srsf5a	62	43.956	ENSATEG00000019984	srsf9	74	40.909
ENSATEG00000000198	srsf5a	65	60.938	ENSATEG00000005680	srsf4	61	62.234

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000000198	srsf5a	100	87.960	ENSAPOG00000017395	srsf5a	79	93.671	Acanthochromis_polyacanthus
ENSATEG00000000198	srsf5a	82	88.983	ENSACIG00000011892	srsf5a	96	92.537	Amphilophus_citrinellus
ENSATEG00000000198	srsf5a	82	88.285	ENSAOCG00000014967	srsf5a	81	92.116	Amphiprion_ocellaris
ENSATEG00000000198	srsf5a	82	88.285	ENSAPEG00000009297	srsf5a	81	92.116	Amphiprion_percula
ENSATEG00000000198	srsf5a	65	77.778	ENSAPLG00000002469	-	70	76.190	Anas_platyrhynchos
ENSATEG00000000198	srsf5a	65	78.723	ENSACAG00000029015	-	68	77.660	Anolis_carolinensis
ENSATEG00000000198	srsf5a	82	93.724	ENSACLG00000027166	srsf5a	91	91.450	Astatotilapia_calliptera
ENSATEG00000000198	srsf5a	100	65.398	ENSAMXG00000030476	srsf5a	67	88.235	Astyanax_mexicanus
ENSATEG00000000198	srsf5a	65	80.319	ENSCPBG00000021518	-	70	80.319	Chrysemys_picta_bellii
ENSATEG00000000198	srsf5a	65	56.633	ENSCSAVG00000011376	-	78	56.784	Ciona_savignyi
ENSATEG00000000198	srsf5a	83	92.593	ENSCSEG00000008109	srsf5a	78	92.593	Cynoglossus_semilaevis
ENSATEG00000000198	srsf5a	81	81.893	ENSCVAG00000016982	srsf5a	96	78.947	Cyprinodon_variegatus
ENSATEG00000000198	srsf5a	65	87.766	ENSDARG00000029818	srsf5a	100	81.618	Danio_rerio
ENSATEG00000000198	srsf5a	65	81.865	ENSELUG00000020439	srsf5a	62	83.938	Esox_lucius
ENSATEG00000000198	srsf5a	65	77.540	ENSFALG00000005098	-	64	76.471	Ficedula_albicollis
ENSATEG00000000198	srsf5a	83	79.845	ENSFHEG00000003955	srsf5a	97	74.483	Fundulus_heteroclitus
ENSATEG00000000198	srsf5a	65	88.770	ENSGMOG00000000869	srsf5a	94	88.235	Gadus_morhua
ENSATEG00000000198	srsf5a	65	77.005	ENSGALG00000033259	SRSF5A	63	75.401	Gallus_gallus
ENSATEG00000000198	srsf5a	84	73.684	ENSGAFG00000018237	srsf5a	74	63.934	Gambusia_affinis
ENSATEG00000000198	srsf5a	100	75.779	ENSGACG00000011761	srsf5a	70	90.374	Gasterosteus_aculeatus
ENSATEG00000000198	srsf5a	65	80.319	ENSGAGG00000007312	-	70	80.319	Gopherus_agassizii
ENSATEG00000000198	srsf5a	82	93.697	ENSHBUG00000014048	srsf5a	91	91.418	Haplochromis_burtoni
ENSATEG00000000198	srsf5a	65	90.909	ENSHCOG00000017557	srsf5a	62	90.909	Hippocampus_comes
ENSATEG00000000198	srsf5a	100	66.774	ENSIPUG00000003439	srsf5a	69	86.316	Ictalurus_punctatus
ENSATEG00000000198	srsf5a	82	78.814	ENSKMAG00000014937	srsf5a	72	80.672	Kryptolebias_marmoratus
ENSATEG00000000198	srsf5a	65	85.128	ENSLBEG00000017153	srsf5a	74	90.256	Labrus_bergylta
ENSATEG00000000198	srsf5a	65	82.353	ENSLACG00000017874	-	70	82.353	Latimeria_chalumnae
ENSATEG00000000198	srsf5a	65	87.302	ENSLOCG00000014075	srsf5a	61	87.166	Lepisosteus_oculatus
ENSATEG00000000198	srsf5a	100	89.003	ENSMAMG00000000192	srsf5a	93	88.679	Mastacembelus_armatus
ENSATEG00000000198	srsf5a	82	94.118	ENSMZEG00005010485	srsf5a	91	91.791	Maylandia_zebra
ENSATEG00000000198	srsf5a	70	75.124	ENSMGAG00000011888	-	96	75.740	Meleagris_gallopavo
ENSATEG00000000198	srsf5a	100	86.711	ENSMMOG00000009793	srsf5a	78	92.405	Mola_mola
ENSATEG00000000198	srsf5a	100	83.505	ENSMALG00000021194	srsf5a	100	81.787	Monopterus_albus
ENSATEG00000000198	srsf5a	82	94.515	ENSNBRG00000000771	srsf5a	91	92.135	Neolamprologus_brichardi
ENSATEG00000000198	srsf5a	82	94.515	ENSONIG00000019583	srsf5a	91	92.135	Oreochromis_niloticus
ENSATEG00000000198	srsf5a	82	85.532	ENSORLG00000009268	srsf5a	92	84.291	Oryzias_latipes
ENSATEG00000000198	srsf5a	82	85.532	ENSORLG00020003281	srsf5	92	84.291	Oryzias_latipes_hni
ENSATEG00000000198	srsf5a	82	85.532	ENSORLG00015023075	srsf5	92	84.291	Oryzias_latipes_hsok
ENSATEG00000000198	srsf5a	82	83.761	ENSOMEG00000000628	srsf5a	92	84.291	Oryzias_melastigma
ENSATEG00000000198	srsf5a	65	87.368	ENSPKIG00000002054	srsf5a	68	88.235	Paramormyrops_kingsleyae
ENSATEG00000000198	srsf5a	65	79.787	ENSPSIG00000008238	-	69	77.128	Pelodiscus_sinensis
ENSATEG00000000198	srsf5a	93	69.759	ENSPMGG00000020125	srsf5a	87	65.541	Periophthalmus_magnuspinnatus
ENSATEG00000000198	srsf5a	84	81.569	ENSPFOG00000022993	srsf5a	88	75.972	Poecilia_formosa
ENSATEG00000000198	srsf5a	83	81.496	ENSPLAG00000005508	srsf5a	88	75.887	Poecilia_latipinna
ENSATEG00000000198	srsf5a	84	81.961	ENSPMEG00000016339	srsf5a	88	76.325	Poecilia_mexicana
ENSATEG00000000198	srsf5a	84	80.859	ENSPREG00000018091	srsf5a	100	72.555	Poecilia_reticulata
ENSATEG00000000198	srsf5a	82	94.118	ENSPNYG00000021245	srsf5a	91	91.791	Pundamilia_nyererei
ENSATEG00000000198	srsf5a	94	65.091	ENSPNAG00000021333	srsf5a	66	85.027	Pygocentrus_nattereri
ENSATEG00000000198	srsf5a	90	78.777	ENSSFOG00015008377	srsf5	95	72.694	Scleropages_formosus
ENSATEG00000000198	srsf5a	100	82.951	ENSSMAG00000010899	srsf5a	100	84.918	Scophthalmus_maximus
ENSATEG00000000198	srsf5a	100	89.420	ENSSDUG00000006103	srsf5a	100	91.468	Seriola_dumerili
ENSATEG00000000198	srsf5a	100	89.153	ENSSLDG00000004146	srsf5a	90	91.011	Seriola_lalandi_dorsalis
ENSATEG00000000198	srsf5a	65	76.064	ENSSPUG00000002052	-	68	75.000	Sphenodon_punctatus
ENSATEG00000000198	srsf5a	82	95.745	ENSSPAG00000002821	srsf5a	81	94.515	Stegastes_partitus
ENSATEG00000000198	srsf5a	65	78.075	ENSTGUG00000011492	-	84	62.249	Taeniopygia_guttata
ENSATEG00000000198	srsf5a	100	89.865	ENSTRUG00000022908	srsf5a	100	89.527	Takifugu_rubripes
ENSATEG00000000198	srsf5a	65	81.915	ENSXETG00000017937	srsf5a	72	81.915	Xenopus_tropicalis
ENSATEG00000000198	srsf5a	84	82.377	ENSXCOG00000015338	srsf5a	79	81.855	Xiphophorus_couchianus
ENSATEG00000000198	srsf5a	84	81.176	ENSXMAG00000012823	srsf5a	80	82.143	Xiphophorus_maculatus