EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSATEG00000000536 (Gene tree)
Gene ID: 113171088
Gene Symbol: rbm42
Alias: mgc10433l|zgc:109907
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Plus strand
Length: 7520 bases
Position: chrOOHO01000006.1:43734050-43741569
Accession: 113171088
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000000708	RRM_1	PF00076.22	7.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000000722	-	2196	-	ENSATEP00000000708	402 (aa)	XP_026229249	UPI000E45464F

Gene Model

Click here to download ENSATEG00000000536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000000536's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000000536	rbm42	100	87.438	ENSAPOG00000015109	rbm42	100	87.438	Acanthochromis_polyacanthus
ENSATEG00000000536	rbm42	100	81.773	ENSACIG00000010771	rbm42	100	81.773	Amphilophus_citrinellus
ENSATEG00000000536	rbm42	100	87.685	ENSAOCG00000008873	rbm42	100	87.685	Amphiprion_ocellaris
ENSATEG00000000536	rbm42	100	87.685	ENSAPEG00000012051	rbm42	99	87.685	Amphiprion_percula
ENSATEG00000000536	rbm42	100	86.453	ENSACLG00000004988	rbm42	100	86.453	Astatotilapia_calliptera
ENSATEG00000000536	rbm42	100	72.902	ENSAMXG00000016545	rbm42	100	72.422	Astyanax_mexicanus
ENSATEG00000000536	rbm42	97	81.612	ENSCSEG00000010248	rbm42	100	81.864	Cynoglossus_semilaevis
ENSATEG00000000536	rbm42	100	79.167	ENSCVAG00000015589	rbm42	100	79.657	Cyprinodon_variegatus
ENSATEG00000000536	rbm42	100	69.438	ENSDARG00000039910	rbm42	100	69.830	Danio_rerio
ENSATEG00000000536	rbm42	100	71.028	ENSELUG00000022403	rbm42	100	69.953	Esox_lucius
ENSATEG00000000536	rbm42	65	76.923	ENSFHEG00000006764	rbm42	87	79.231	Fundulus_heteroclitus
ENSATEG00000000536	rbm42	100	73.659	ENSGMOG00000012660	rbm42	100	71.707	Gadus_morhua
ENSATEG00000000536	rbm42	76	76.206	ENSGAFG00000009059	rbm42	99	78.571	Gambusia_affinis
ENSATEG00000000536	rbm42	100	82.266	ENSGACG00000004170	rbm42	100	82.020	Gasterosteus_aculeatus
ENSATEG00000000536	rbm42	100	86.207	ENSHBUG00000011141	rbm42	100	86.207	Haplochromis_burtoni
ENSATEG00000000536	rbm42	100	75.795	ENSHCOG00000021214	rbm42	100	75.245	Hippocampus_comes
ENSATEG00000000536	rbm42	100	73.333	ENSIPUG00000022365	rbm42	99	72.076	Ictalurus_punctatus
ENSATEG00000000536	rbm42	91	78.862	ENSKMAG00000015287	rbm42	99	79.133	Kryptolebias_marmoratus
ENSATEG00000000536	rbm42	100	80.685	ENSLBEG00000017547	rbm42	100	81.418	Labrus_bergylta
ENSATEG00000000536	rbm42	85	81.792	ENSLBEG00000004578	-	96	82.659	Labrus_bergylta
ENSATEG00000000536	rbm42	100	67.221	ENSLOCG00000003368	rbm42	100	67.933	Lepisosteus_oculatus
ENSATEG00000000536	rbm42	100	86.700	ENSMAMG00000006708	rbm42	100	86.700	Mastacembelus_armatus
ENSATEG00000000536	rbm42	100	86.453	ENSMZEG00005025234	rbm42	100	86.453	Maylandia_zebra
ENSATEG00000000536	rbm42	91	87.805	ENSMALG00000015720	rbm42	100	87.805	Monopterus_albus
ENSATEG00000000536	rbm42	100	85.575	ENSONIG00000008029	rbm42	100	85.575	Oreochromis_niloticus
ENSATEG00000000536	rbm42	100	63.876	ENSORLG00020022507	rbm42	100	60.648	Oryzias_latipes_hni
ENSATEG00000000536	rbm42	100	82.673	ENSORLG00015000659	rbm42	100	83.168	Oryzias_latipes_hsok
ENSATEG00000000536	rbm42	59	88.285	ENSOMEG00000014332	rbm42	91	88.285	Oryzias_melastigma
ENSATEG00000000536	rbm42	100	73.621	ENSPKIG00000015165	rbm42	100	72.115	Paramormyrops_kingsleyae
ENSATEG00000000536	rbm42	77	85.484	ENSPMGG00000003569	rbm42	100	97.143	Periophthalmus_magnuspinnatus
ENSATEG00000000536	rbm42	53	57.207	ENSPMAG00000008633	rbm42	100	49.062	Petromyzon_marinus
ENSATEG00000000536	rbm42	100	77.887	ENSPFOG00000007701	rbm42	100	79.853	Poecilia_formosa
ENSATEG00000000536	rbm42	100	77.887	ENSPLAG00000009405	rbm42	100	79.853	Poecilia_latipinna
ENSATEG00000000536	rbm42	100	78.133	ENSPMEG00000010375	rbm42	100	80.098	Poecilia_mexicana
ENSATEG00000000536	rbm42	100	77.887	ENSPREG00000018102	rbm42	100	79.853	Poecilia_reticulata
ENSATEG00000000536	rbm42	100	86.453	ENSPNYG00000014460	rbm42	100	86.453	Pundamilia_nyererei
ENSATEG00000000536	rbm42	100	72.619	ENSPNAG00000009961	rbm42	100	72.143	Pygocentrus_nattereri
ENSATEG00000000536	rbm42	100	70.353	ENSSFOG00015019227	rbm42	100	70.353	Scleropages_formosus
ENSATEG00000000536	rbm42	100	84.521	ENSSMAG00000011935	rbm42	100	84.521	Scophthalmus_maximus
ENSATEG00000000536	rbm42	100	88.424	ENSSDUG00000004033	rbm42	100	88.424	Seriola_dumerili
ENSATEG00000000536	rbm42	100	77.475	ENSSLDG00000009918	rbm42	100	91.765	Seriola_lalandi_dorsalis
ENSATEG00000000536	rbm42	100	86.946	ENSSPAG00000019871	rbm42	100	86.946	Stegastes_partitus
ENSATEG00000000536	rbm42	100	78.079	ENSTRUG00000024586	-	76	76.847	Takifugu_rubripes
ENSATEG00000000536	rbm42	99	70.387	ENSTNIG00000011669	rbm42	100	68.793	Tetraodon_nigroviridis
ENSATEG00000000536	rbm42	100	58.411	ENSXETG00000017599	rbm42	100	58.057	Xenopus_tropicalis
ENSATEG00000000536	rbm42	100	77.641	ENSXMAG00000012827	rbm42	100	79.607	Xiphophorus_maculatus