EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSATEG00000000848 (Gene tree)
Gene ID: 113157865
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Anabas_testudineus
Status: putative
Strand: Minus strand
Length: 43064 bases
Position: chrOOHO01000015.1:5634404-5677467
Accession: 113157865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSATEP00000001390	ResIII	PF04851.15	1.2e-07	1	1
ENSATEP00000001346	ResIII	PF04851.15	6.9e-07	1	1
ENSATEP00000001377	ResIII	PF04851.15	7.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSATET00000001412	-	4863	-	ENSATEP00000001390	1620 (aa)	-	-
ENSATET00000001399	-	7650	-	ENSATEP00000001377	2148 (aa)	-	-
ENSATET00000001379	-	8907	XM_026353509	ENSATEP00000001357	2063 (aa)	XP_026209294	UPI000E4558B4
ENSATET00000001368	-	8997	-	ENSATEP00000001346	2093 (aa)	-	-

Gene Model

Click here to download ENSATEG00000000848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSATEG00000000848's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSATEG00000000848	chd3	99	68.138	ENSATEG00000000976	-	99	67.656
ENSATEG00000000848	chd3	93	83.750	ENSATEG00000016428	chd4a	92	82.938
ENSATEG00000000848	chd3	91	64.013	ENSATEG00000021141	-	96	65.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSATEG00000000848	chd3	95	82.105	ENSG00000170004	CHD3	91	81.315	Homo_sapiens
ENSATEG00000000848	chd3	99	87.363	ENSAPOG00000005614	chd3	94	94.211	Acanthochromis_polyacanthus
ENSATEG00000000848	chd3	68	82.015	ENSAMEG00000003025	-	100	75.723	Ailuropoda_melanoleuca
ENSATEG00000000848	chd3	95	94.118	ENSACIG00000019671	chd3	99	94.595	Amphilophus_citrinellus
ENSATEG00000000848	chd3	100	93.095	ENSAOCG00000023784	chd3	100	92.956	Amphiprion_ocellaris
ENSATEG00000000848	chd3	100	92.864	ENSAPEG00000006341	chd3	100	93.142	Amphiprion_percula
ENSATEG00000000848	chd3	99	74.501	ENSACAG00000004276	CHD3	94	74.340	Anolis_carolinensis
ENSATEG00000000848	chd3	95	82.105	ENSANAG00000034323	CHD3	99	74.383	Aotus_nancymaae
ENSATEG00000000848	chd3	99	87.087	ENSACLG00000009222	chd3	100	90.300	Astatotilapia_calliptera
ENSATEG00000000848	chd3	95	81.675	ENSBTAG00000014377	CHD3	96	73.449	Bos_taurus
ENSATEG00000000848	chd3	99	74.304	ENSCJAG00000014766	CHD3	91	81.315	Callithrix_jacchus
ENSATEG00000000848	chd3	99	74.163	ENSCAFG00000016859	CHD3	96	72.859	Canis_familiaris
ENSATEG00000000848	chd3	99	74.940	ENSCAFG00020007422	CHD3	96	79.087	Canis_lupus_dingo
ENSATEG00000000848	chd3	95	82.632	ENSCHIG00000016737	CHD3	98	72.886	Capra_hircus
ENSATEG00000000848	chd3	99	74.364	ENSTSYG00000035658	CHD3	91	80.969	Carlito_syrichta
ENSATEG00000000848	chd3	99	70.733	ENSCAPG00000014864	CHD3	96	69.124	Cavia_aperea
ENSATEG00000000848	chd3	99	73.548	ENSCPOG00000022653	CHD3	84	72.786	Cavia_porcellus
ENSATEG00000000848	chd3	95	82.105	ENSCCAG00000034792	CHD3	97	73.035	Cebus_capucinus
ENSATEG00000000848	chd3	95	82.105	ENSCATG00000041717	CHD3	91	81.315	Cercocebus_atys
ENSATEG00000000848	chd3	95	81.579	ENSCLAG00000010523	CHD3	92	80.969	Chinchilla_lanigera
ENSATEG00000000848	chd3	95	82.105	ENSCSAG00000011122	CHD3	98	73.244	Chlorocebus_sabaeus
ENSATEG00000000848	chd3	99	77.062	ENSCPBG00000011966	CHD3	95	86.528	Chrysemys_picta_bellii
ENSATEG00000000848	chd3	95	82.105	ENSCANG00000037641	CHD3	91	81.315	Colobus_angolensis_palliatus
ENSATEG00000000848	chd3	99	73.496	ENSCGRG00001011306	Chd3	92	81.315	Cricetulus_griseus_chok1gshd
ENSATEG00000000848	chd3	89	70.675	ENSCGRG00000007878	Chd3	89	78.435	Cricetulus_griseus_crigri
ENSATEG00000000848	chd3	99	84.245	ENSCSEG00000004489	chd3	100	90.476	Cynoglossus_semilaevis
ENSATEG00000000848	chd3	99	84.839	ENSCVAG00000007293	chd3	95	94.239	Cyprinodon_variegatus
ENSATEG00000000848	chd3	99	82.508	ENSDARG00000021405	chd3	99	90.764	Danio_rerio
ENSATEG00000000848	chd3	88	71.570	ENSDNOG00000047846	CHD3	84	72.880	Dasypus_novemcinctus
ENSATEG00000000848	chd3	95	81.579	ENSDORG00000010713	Chd3	92	80.623	Dipodomys_ordii
ENSATEG00000000848	chd3	99	68.403	ENSETEG00000017733	CHD3	95	70.557	Echinops_telfairi
ENSATEG00000000848	chd3	74	86.709	ENSEBUG00000008310	chd3	81	86.709	Eptatretus_burgeri
ENSATEG00000000848	chd3	99	73.783	ENSEASG00005019360	CHD3	100	74.331	Equus_asinus_asinus
ENSATEG00000000848	chd3	95	82.105	ENSECAG00000010051	CHD3	100	74.331	Equus_caballus
ENSATEG00000000848	chd3	86	92.708	ENSEEUG00000015205	CHD3	84	92.708	Erinaceus_europaeus
ENSATEG00000000848	chd3	92	96.622	ENSELUG00000019499	chd3	99	96.622	Esox_lucius
ENSATEG00000000848	chd3	99	73.036	ENSFCAG00000009629	CHD3	94	72.895	Felis_catus
ENSATEG00000000848	chd3	95	82.105	ENSFDAG00000008220	CHD3	97	72.514	Fukomys_damarensis
ENSATEG00000000848	chd3	95	89.005	ENSGMOG00000013599	chd3	91	87.185	Gadus_morhua
ENSATEG00000000848	chd3	64	84.196	ENSGAFG00000004055	chd3	99	88.974	Gambusia_affinis
ENSATEG00000000848	chd3	95	90.957	ENSGACG00000019275	chd3	99	81.929	Gasterosteus_aculeatus
ENSATEG00000000848	chd3	88	74.423	ENSGAGG00000013164	CHD3	99	76.475	Gopherus_agassizii
ENSATEG00000000848	chd3	99	74.364	ENSGGOG00000013496	CHD3	91	81.315	Gorilla_gorilla
ENSATEG00000000848	chd3	95	82.105	ENSHGLG00000012017	CHD3	88	81.315	Heterocephalus_glaber_female
ENSATEG00000000848	chd3	79	86.640	ENSHGLG00100013902	CHD3	93	84.556	Heterocephalus_glaber_male
ENSATEG00000000848	chd3	95	91.053	ENSHCOG00000010170	chd3	99	85.223	Hippocampus_comes
ENSATEG00000000848	chd3	93	93.671	ENSIPUG00000003271	chd3	89	93.671	Ictalurus_punctatus
ENSATEG00000000848	chd3	99	74.408	ENSSTOG00000025907	CHD3	95	81.315	Ictidomys_tridecemlineatus
ENSATEG00000000848	chd3	95	82.105	ENSJJAG00000017633	Chd3	92	81.315	Jaculus_jaculus
ENSATEG00000000848	chd3	92	97.279	ENSKMAG00000019292	chd3	93	97.500	Kryptolebias_marmoratus
ENSATEG00000000848	chd3	89	92.460	ENSLBEG00000028485	chd3	91	93.496	Labrus_bergylta
ENSATEG00000000848	chd3	95	77.251	ENSLACG00000008031	CHD3	94	72.025	Latimeria_chalumnae
ENSATEG00000000848	chd3	95	89.175	ENSLOCG00000013965	chd3	100	78.399	Lepisosteus_oculatus
ENSATEG00000000848	chd3	95	75.677	ENSLAFG00000000572	CHD3	95	77.898	Loxodonta_africana
ENSATEG00000000848	chd3	95	82.105	ENSMFAG00000020113	CHD3	91	81.315	Macaca_fascicularis
ENSATEG00000000848	chd3	95	82.105	ENSMMUG00000022221	CHD3	86	81.017	Macaca_mulatta
ENSATEG00000000848	chd3	95	82.105	ENSMNEG00000001728	CHD3	99	73.950	Macaca_nemestrina
ENSATEG00000000848	chd3	95	82.105	ENSMLEG00000032249	CHD3	91	81.315	Mandrillus_leucophaeus
ENSATEG00000000848	chd3	99	90.231	ENSMAMG00000000564	chd3	95	95.827	Mastacembelus_armatus
ENSATEG00000000848	chd3	95	82.105	ENSMAUG00000013873	Chd3	89	81.315	Mesocricetus_auratus
ENSATEG00000000848	chd3	95	82.105	ENSMICG00000008741	CHD3	88	80.969	Microcebus_murinus
ENSATEG00000000848	chd3	99	74.092	ENSMOCG00000004848	Chd3	92	80.969	Microtus_ochrogaster
ENSATEG00000000848	chd3	94	95.954	ENSMMOG00000012699	chd3	98	85.654	Mola_mola
ENSATEG00000000848	chd3	99	74.805	ENSMODG00000007509	CHD3	96	80.000	Monodelphis_domestica
ENSATEG00000000848	chd3	99	74.096	MGP_CAROLIEiJ_G0016564	Chd3	95	80.969	Mus_caroli
ENSATEG00000000848	chd3	99	73.905	ENSMUSG00000018474	Chd3	94	80.969	Mus_musculus
ENSATEG00000000848	chd3	99	74.299	MGP_PahariEiJ_G0017695	Chd3	94	80.969	Mus_pahari
ENSATEG00000000848	chd3	99	73.964	MGP_SPRETEiJ_G0017400	Chd3	94	80.969	Mus_spretus
ENSATEG00000000848	chd3	89	81.152	ENSMPUG00000008861	CHD3	99	74.986	Mustela_putorius_furo
ENSATEG00000000848	chd3	99	72.733	ENSMLUG00000014643	-	96	72.976	Myotis_lucifugus
ENSATEG00000000848	chd3	99	73.474	ENSNGAG00000000773	Chd3	96	72.687	Nannospalax_galili
ENSATEG00000000848	chd3	99	86.520	ENSNBRG00000000636	chd3	98	89.481	Neolamprologus_brichardi
ENSATEG00000000848	chd3	99	72.440	ENSNLEG00000009770	CHD3	92	83.071	Nomascus_leucogenys
ENSATEG00000000848	chd3	85	86.857	ENSMEUG00000005852	CHD3	84	81.379	Notamacropus_eugenii
ENSATEG00000000848	chd3	95	81.771	ENSOPRG00000011069	CHD3	99	72.966	Ochotona_princeps
ENSATEG00000000848	chd3	99	72.903	ENSODEG00000017785	CHD3	97	72.623	Octodon_degus
ENSATEG00000000848	chd3	95	94.764	ENSONIG00000009292	chd3	99	89.740	Oreochromis_niloticus
ENSATEG00000000848	chd3	98	70.155	ENSOCUG00000029299	CHD3	99	68.895	Oryctolagus_cuniculus
ENSATEG00000000848	chd3	90	81.740	ENSORLG00000007107	chd3	90	89.392	Oryzias_latipes
ENSATEG00000000848	chd3	61	84.143	ENSORLG00020008387	chd3	76	92.051	Oryzias_latipes_hni
ENSATEG00000000848	chd3	99	87.256	ENSOMEG00000013691	chd3	99	87.694	Oryzias_melastigma
ENSATEG00000000848	chd3	95	82.105	ENSOGAG00000003216	CHD3	98	73.035	Otolemur_garnettii
ENSATEG00000000848	chd3	95	78.307	ENSOARG00000017855	CHD3	97	72.008	Ovis_aries
ENSATEG00000000848	chd3	95	82.105	ENSPPAG00000032886	CHD3	99	71.532	Pan_paniscus
ENSATEG00000000848	chd3	95	81.579	ENSPPRG00000000626	CHD3	91	80.969	Panthera_pardus
ENSATEG00000000848	chd3	95	82.105	ENSPTRG00000008714	CHD3	91	81.315	Pan_troglodytes
ENSATEG00000000848	chd3	95	82.105	ENSPANG00000023938	CHD3	99	72.899	Papio_anubis
ENSATEG00000000848	chd3	95	92.105	ENSPKIG00000006305	chd3	96	89.547	Paramormyrops_kingsleyae
ENSATEG00000000848	chd3	65	77.717	ENSPSIG00000010177	CHD3	97	80.922	Pelodiscus_sinensis
ENSATEG00000000848	chd3	95	82.105	ENSPEMG00000014262	Chd3	97	72.913	Peromyscus_maniculatus_bairdii
ENSATEG00000000848	chd3	95	81.443	ENSPCIG00000005442	CHD3	95	84.298	Phascolarctos_cinereus
ENSATEG00000000848	chd3	100	90.023	ENSPFOG00000012464	chd3	100	89.607	Poecilia_formosa
ENSATEG00000000848	chd3	99	81.160	ENSPLAG00000002887	chd3	94	94.239	Poecilia_latipinna
ENSATEG00000000848	chd3	61	87.500	ENSPMEG00000016725	chd3	74	91.570	Poecilia_mexicana
ENSATEG00000000848	chd3	99	85.138	ENSPREG00000011044	chd3	97	92.808	Poecilia_reticulata
ENSATEG00000000848	chd3	99	70.892	ENSPPYG00000007940	CHD3	98	70.582	Pongo_abelii
ENSATEG00000000848	chd3	90	82.105	ENSPCAG00000004350	CHD3	94	76.554	Procavia_capensis
ENSATEG00000000848	chd3	95	82.105	ENSPCOG00000020952	CHD3	97	73.161	Propithecus_coquereli
ENSATEG00000000848	chd3	83	70.887	ENSPVAG00000016344	CHD3	82	75.257	Pteropus_vampyrus
ENSATEG00000000848	chd3	95	92.632	ENSPNAG00000020393	chd3	98	89.168	Pygocentrus_nattereri
ENSATEG00000000848	chd3	99	73.138	ENSRNOG00000009722	Chd3	100	73.756	Rattus_norvegicus
ENSATEG00000000848	chd3	95	82.105	ENSRBIG00000033562	CHD3	91	81.315	Rhinopithecus_bieti
ENSATEG00000000848	chd3	95	82.105	ENSRROG00000029554	CHD3	91	81.315	Rhinopithecus_roxellana
ENSATEG00000000848	chd3	95	82.105	ENSSBOG00000020719	CHD3	99	73.936	Saimiri_boliviensis_boliviensis
ENSATEG00000000848	chd3	99	74.761	ENSSHAG00000014412	CHD3	93	80.412	Sarcophilus_harrisii
ENSATEG00000000848	chd3	90	92.655	ENSSFOG00015023123	chd3	84	93.182	Scleropages_formosus
ENSATEG00000000848	chd3	94	98.810	ENSSMAG00000006451	chd3	100	92.443	Scophthalmus_maximus
ENSATEG00000000848	chd3	59	86.694	ENSSDUG00000005792	chd3	76	94.737	Seriola_dumerili
ENSATEG00000000848	chd3	99	93.259	ENSSPAG00000013694	chd3	99	95.213	Stegastes_partitus
ENSATEG00000000848	chd3	95	81.250	ENSSSCG00000021363	CHD3	100	74.606	Sus_scrofa
ENSATEG00000000848	chd3	85	86.889	ENSTRUG00000014990	chd3	97	84.615	Takifugu_rubripes
ENSATEG00000000848	chd3	99	84.185	ENSTNIG00000012998	chd3	98	85.296	Tetraodon_nigroviridis
ENSATEG00000000848	chd3	72	87.864	ENSTBEG00000011454	-	68	87.864	Tupaia_belangeri
ENSATEG00000000848	chd3	93	81.579	ENSTTRG00000010295	CHD3	95	75.774	Tursiops_truncatus
ENSATEG00000000848	chd3	95	82.105	ENSUAMG00000005475	CHD3	95	81.893	Ursus_americanus
ENSATEG00000000848	chd3	55	84.524	ENSVPAG00000010794	-	56	94.118	Vicugna_pacos
ENSATEG00000000848	chd3	99	74.940	ENSVVUG00000028011	CHD3	98	74.190	Vulpes_vulpes
ENSATEG00000000848	chd3	95	81.633	ENSXETG00000012991	chd3	92	67.789	Xenopus_tropicalis
ENSATEG00000000848	chd3	59	87.584	ENSXCOG00000000809	chd3	93	92.085	Xiphophorus_couchianus
ENSATEG00000000848	chd3	94	93.548	ENSXMAG00000016035	chd3	99	93.548	Xiphophorus_maculatus